Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:27:50 (373349): wrapper (7.7.26015): starting
19:27:50 (373349): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 19:27:50] Arguments: --nthreads 12
[2025-07-22 19:27:50] Threads: 12
[2025-07-22 19:27:50] Checking for CVMFS
[2025-07-22 19:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 19:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 19:27:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 19:27:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 19:27:51] 2.11.5.0 34389 30631 151360 148642 3 366 43325613 45568001 14722 130560 0 228373870 99.721 192499438 30840 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 19:27:51] CVMFS is ok
[2025-07-22 19:27:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 19:27:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 19:27:51] Further information can be found at the LHC@home message board.
[2025-07-22 19:27:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 19:27:51] Checking for apptainer binary...
[2025-07-22 19:27:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 19:27:51] Running /usr/bin/apptainer --version
[2025-07-22 19:27:51] apptainer version 1.4.1-1.el9
[2025-07-22 19:27:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 19:27:51] wns0078.triumf.lcg
[2025-07-22 19:27:51] apptainer works
[2025-07-22 19:27:51] Set ATHENA_PROC_NUMBER=12
[2025-07-22 19:27:51] Set ATHENA_CORE_NUMBER=12
[2025-07-22 19:27:51] Starting ATLAS job with PandaID=6741854961
[2025-07-22 19:27:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 19:32:42]  *** The last 200 lines of the pilot log: ***
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | wrong length of table data, x=[1753237760.0], y=[2662.0] (must be same and length>=4)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | INFO     | could have reported an average CPU frequency of 2535 MHz (4 samples)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | ..............................
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . Timing measurements:
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . get job = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . initial setup = 3 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . payload setup = 14 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . stage-in = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . payload execution = 45 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . stage-out = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . log creation = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | ..............................
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741854961/pilotlog.txt
[2025-07-22 19:32:42] 2025-07-23 02:32:06,693 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 19:32:42] - Log from pilotlog.txt -
[2025-07-22 19:32:42] 2025-07-23 02:32:06,509 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741854961/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | INFO     | extracted standard info from prmon json
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | wrong length of table data, x=[1753237760.0], y=[2662.0] (must be same and length>=4)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | INFO     | could have reported an average CPU frequency of 2535 MHz (4 samples)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | ..............................
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . Timing measurements:
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . get job = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . initial setup = 3 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . payload setup = 14 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . stage-in = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . payload execution = 45 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . stage-out = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . log creation = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | ..............................
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741854961/pilotlog.txt
[2025-07-22 19:32:42] 2025-07-23 02:32:06,693 | WARNING  | 
[2025-07-22 19:32:42] [begin log extracts]
[2025-07-22 19:32:42] - Log from pilotlog.txt -
[2025-07-22 19:32:42] 2025-07-23 02:32:06,509 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741854961/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | INFO     | extracted standard info from prmon json
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 19:32:42] 2025-07-23 02:32:06,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | WARNING  | wrong length of table data, x=[1753237760.0], y=[2662.0] (must be same and length>=4)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,557 | INFO     | could have reported an average CPU frequency of 2535 MHz (4 samples)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | ..............................
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . Timing measurements:
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . get job = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . initial setup = 3 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . payload setup = 14 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . stage-in = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . payload execution = 45 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . stage-out = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | . log creation = 0 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | ..............................
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 19:32:42] 2025-07-23 02:32:06,558 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741854961/pilotlog.txt
[2025-07-22 19:32:42] [end log extracts]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,693 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,694 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | 
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | job summary report
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | --------------------------------------------------
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | PanDA job id: 6741854961
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | task id: 45697490
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 19:29:44,942 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 19:32:42] 2025-07-23 02:32:06,965 | INFO     | pilot state: failed 
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | transexitcode: 65
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | exeerrorcode: 65
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | exitcode: 65
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | nevents: 0
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | neventsw: 0
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | pid: 389592
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | pgrp: 389592
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | corecount: 12
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | event service: False
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | sizes: {0: 2397447, 1: 2397475, 12: 2397475, 13: 2397765, 22: 2397821, 63: 2421271, 65: 2425563, 66: 2425591, 196: 2425757}
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | --------------------------------------------------
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | 
[2025-07-22 19:32:42] 2025-07-23 02:32:06,966 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | job 6741854961 has completed (purged errors)
[2025-07-22 19:32:42] 2025-07-23 02:32:06,986 | INFO     | overall cleanup function is called
[2025-07-22 19:32:42] 2025-07-23 02:32:07,993 | INFO     | --- collectZombieJob: --- 10, [389592]
[2025-07-22 19:32:42] 2025-07-23 02:32:07,993 | INFO     | zombie collector waiting for pid 389592
[2025-07-22 19:32:42] 2025-07-23 02:32:07,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 19:32:42] 2025-07-23 02:32:07,993 | INFO     | collected zombie processes
[2025-07-22 19:32:42] 2025-07-23 02:32:07,993 | INFO     | will attempt to kill all subprocesses of pid=389592
[2025-07-22 19:32:42] 2025-07-23 02:32:08,844 | INFO     | process IDs to be killed: [389592] (in reverse order)
[2025-07-22 19:32:42] 2025-07-23 02:32:08,966 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 19:32:42] 2025-07-23 02:32:08,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 19:32:42] 2025-07-23 02:32:08,984 | INFO     | did not find any defunct processes belonging to 389592
[2025-07-22 19:32:42] 2025-07-23 02:32:09,029 | INFO     | did not find any defunct processes belonging to 389592
[2025-07-22 19:32:42] 2025-07-23 02:32:09,030 | INFO     | ready for new job
[2025-07-22 19:32:42] 2025-07-23 02:32:09,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 19:32:42] 2025-07-23 02:32:09,031 | INFO     | ***************************************
[2025-07-22 19:32:42] 2025-07-23 02:32:09,031 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 19:32:42] 2025-07-23 02:32:09,032 | INFO     | ***************************************
[2025-07-22 19:32:42] 2025-07-23 02:32:09,032 | INFO     | 
[2025-07-22 19:32:42] 2025-07-23 02:32:09,033 | INFO     | architecture information:
[2025-07-22 19:32:42] 2025-07-23 02:32:09,048 | INFO     | executing command: cat /etc/os-release
[2025-07-22 19:32:42] 2025-07-23 02:32:09,118 | INFO     | cat /etc/os-release:
[2025-07-22 19:32:42] NAME="CentOS Linux"
[2025-07-22 19:32:42] VERSION="7 (Core)"
[2025-07-22 19:32:42] ID="centos"
[2025-07-22 19:32:42] ID_LIKE="rhel fedora"
[2025-07-22 19:32:42] VERSION_ID="7"
[2025-07-22 19:32:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 19:32:42] ANSI_COLOR="0;31"
[2025-07-22 19:32:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 19:32:42] HOME_URL="https://www.centos.org/"
[2025-07-22 19:32:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 19:32:42] 
[2025-07-22 19:32:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 19:32:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 19:32:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 19:32:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 19:32:42] 
[2025-07-22 19:32:42] 2025-07-23 02:32:09,118 | INFO     | ***************************************
[2025-07-22 19:32:42] 2025-07-23 02:32:09,622 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 19:32:42] 2025-07-23 02:32:09,690 | INFO     | sufficient remaining disk space (2021493047296 B)
[2025-07-22 19:32:42] 2025-07-23 02:32:09,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 19:32:42] 2025-07-23 02:32:09,690 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 19:32:42] 2025-07-23 02:32:09,691 | INFO     | update_server=False
[2025-07-22 19:32:42] 2025-07-23 02:32:09,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 19:32:42] 2025-07-23 02:32:09,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 19:32:42] 2025-07-23 02:32:09,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 19:32:42] 2025-07-23 02:32:09,692 | INFO     | aborting loop
[2025-07-22 19:32:42] 2025-07-23 02:32:09,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 19:32:42] 2025-07-23 02:32:10,095 | INFO     | all job control threads have been joined
[2025-07-22 19:32:42] 2025-07-23 02:32:10,697 | INFO     | [job] retrieve thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:10,702 | INFO     | [job] job monitor thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:10,767 | INFO     | all data control threads have been joined
[2025-07-22 19:32:42] 2025-07-23 02:32:11,070 | INFO     | all payload control threads have been joined
[2025-07-22 19:32:42] 2025-07-23 02:32:11,101 | INFO     | [job] control thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,186 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,190 | INFO     | [job] validate thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,256 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,621 | INFO     | [data] copytool_in thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,640 | INFO     | [payload] validate_post thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,640 | INFO     | [payload] failed_post thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,698 | INFO     | [data] copytool_out thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,773 | INFO     | [data] control thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:11,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 19:32:42] 2025-07-23 02:32:11,992 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:12,077 | INFO     | [payload] control thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:12,992 | INFO     | [job] queue monitor thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:13,782 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 19:32:42] 2025-07-23 02:32:14,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578795575104)>', '<ExcThread(monitor, started 140578406774528)>']
[2025-07-22 19:32:42] 2025-07-23 02:32:19,207 | INFO     | all workflow threads have been joined
[2025-07-22 19:32:42] 2025-07-23 02:32:19,207 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 19:32:42] 2025-07-23 02:32:19,207 | INFO     | traces error code: 0
[2025-07-22 19:32:42] 2025-07-23 02:32:19,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 19:32:42] 2025-07-23 02:32:40,384 | INFO     | PID=377995 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 19:32:42] 2025-07-23 02:32:40,385 | INFO     | .. there are 28 such processes running
[2025-07-22 19:32:42] 2025-07-23 02:32:40,385 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 19:32:42] 2025-07-23 02:32:40,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 19:32:42] 2025-07-23 02:32:40,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 19:32:42] 2025-07-23 02:32:40,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 19:32:42] 2025-07-23 02:32:40,386 | INFO     | [monitor] control thread has ended
[2025-07-22 19:32:42] 2025-07-23 02:32:40,524 [wrapper] ==== pilot stdout END ====
[2025-07-22 19:32:42] 2025-07-23 02:32:40,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 19:32:42] 2025-07-23 02:32:40,529 [wrapper] pilotpid: 377995
[2025-07-22 19:32:42] 2025-07-23 02:32:40,530 [wrapper] Pilot exit status: 0
[2025-07-22 19:32:42] 2025-07-23 02:32:40,693 [wrapper] pandaids: 6741854961
[2025-07-22 19:32:42] 2025-07-23 02:32:41,204 [wrapper] cleanup supervisor_pilot  378001 377996
[2025-07-22 19:32:42] 2025-07-23 02:32:41,246 [wrapper] Test setup, not cleaning
[2025-07-22 19:32:42] 2025-07-23 02:32:41,283 [wrapper] apfmon messages muted
[2025-07-22 19:32:42] 2025-07-23 02:32:41,380 [wrapper] ==== wrapper stdout END ====
[2025-07-22 19:32:42] 2025-07-23 02:32:41,402 [wrapper] ==== wrapper stderr END ====
[2025-07-22 19:32:42]  *** Error codes and diagnostics ***
[2025-07-22 19:32:42]     "exeErrorCode": 65,
[2025-07-22 19:32:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 19:32:42]     "pilotErrorCode": 1305,
[2025-07-22 19:32:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 19:32:42]  *** Listing of results directory ***
[2025-07-22 19:32:42] total 342988
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc      5112 Jul 22 15:15 queuedata.json
[2025-07-22 19:32:42] -rwx------. 1 boinc boinc     36292 Jul 22 15:17 runpilot2-wrapper.sh
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc    530466 Jul 22 15:17 pilot3.tar.gz
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc       100 Jul 22 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 19:32:42] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 19:27 run_atlas
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc       105 Jul 22 19:27 job.xml
[2025-07-22 19:32:42] -rw-r--r--. 2 boinc boinc 347143691 Jul 22 19:27 EVNT.45697488._000110.pool.root.1
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc      6596 Jul 22 19:27 init_data.xml
[2025-07-22 19:32:42] -rw-r--r--. 2 boinc boinc     15095 Jul 22 19:27 start_atlas.sh
[2025-07-22 19:32:42] drwxrwx--x. 2 boinc boinc      4096 Jul 22 19:27 shared
[2025-07-22 19:32:42] -rw-r--r--. 2 boinc boinc    542893 Jul 22 19:27 input.tar.gz
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc         0 Jul 22 19:27 boinc_lockfile
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc      2587 Jul 22 19:27 pandaJob.out
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc    977736 Jul 22 19:28 agis_schedconf.cvmfs.json
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc   1593031 Jul 22 19:28 agis_ddmendpoints.agis.ALL.json
[2025-07-22 19:32:42] drwx------. 4 boinc boinc      4096 Jul 22 19:28 pilot3
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc       524 Jul 22 19:29 boinc_task_state.xml
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc       967 Jul 22 19:29 memory_monitor_summary.json
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc     21203 Jul 22 19:29 log.45697490._002257.job.log.tgz.1
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc      8424 Jul 22 19:32 heartbeat.json
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc        95 Jul 22 19:32 pilot_heartbeat.json
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc       822 Jul 22 19:32 pilotlog.txt
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc     79370 Jul 22 19:32 log.45697490._002257.job.log.1
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc      8192 Jul 22 19:32 boinc_mmap_file
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc       188 Jul 22 19:32 output.list
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc       620 Jul 22 19:32 runtime_log
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc    122880 Jul 22 19:32 result.tar.gz
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc        22 Jul 22 19:32 wrapper_checkpoint.txt
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc      8485 Jul 22 19:32 runtime_log.err
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc       645 Jul 22 19:32 6hRMDmFUay7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGKKLDmmrQNXn.diag
[2025-07-22 19:32:42] -rw-r--r--. 1 boinc boinc     21806 Jul 22 19:32 stderr.txt
[2025-07-22 19:32:42] No HITS result produced
[2025-07-22 19:32:42]  *** Contents of shared directory: ***
[2025-07-22 19:32:42] total 339680
[2025-07-22 19:32:42] -rw-r--r--. 2 boinc boinc 347143691 Jul 22 19:27 ATLAS.root_0
[2025-07-22 19:32:42] -rw-r--r--. 2 boinc boinc     15095 Jul 22 19:27 start_atlas.sh
[2025-07-22 19:32:42] -rw-r--r--. 2 boinc boinc    542893 Jul 22 19:27 input.tar.gz
[2025-07-22 19:32:42] -rw-------. 1 boinc boinc    122880 Jul 22 19:32 result.tar.gz
19:32:44 (373349): run_atlas exited; CPU time 25.290175
19:32:44 (373349): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN