Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:22:10 (365097): wrapper (7.7.26015): starting
18:22:10 (365097): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 18:22:10] Arguments: --nthreads 12
[2025-07-22 18:22:10] Threads: 12
[2025-07-22 18:22:10] Checking for CVMFS
[2025-07-22 18:22:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 18:22:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 18:22:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 18:22:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 18:22:10] 2.11.5.0 2427 30782 321928 148640 2 240 40667139 45568000 10263 130560 0 229088845 99.738 170616751 29726 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 18:22:10] CVMFS is ok
[2025-07-22 18:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 18:22:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 18:22:10] Further information can be found at the LHC@home message board.
[2025-07-22 18:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 18:22:10] Checking for apptainer binary...
[2025-07-22 18:22:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 18:22:10] Running /usr/bin/apptainer --version
[2025-07-22 18:22:10] apptainer version 1.4.1-1.el9
[2025-07-22 18:22:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 18:22:11] wns0026.triumf.lcg
[2025-07-22 18:22:11] apptainer works
[2025-07-22 18:22:11] Set ATHENA_PROC_NUMBER=12
[2025-07-22 18:22:11] Set ATHENA_CORE_NUMBER=12
[2025-07-22 18:22:11] Starting ATLAS job with PandaID=6742557040
[2025-07-22 18:22:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 18:25:29]  *** The last 200 lines of the pilot log: ***
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | found no stored workdir sizes
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | WARNING  | wrong length of table data, x=[1753233759.0], y=[786.0] (must be same and length>=4)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | ..............................
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . Timing measurements:
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . get job = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . initial setup = 2 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . payload setup = 3 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . stage-in = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . payload execution = 14 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . stage-out = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . log creation = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | ..............................
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742557040/pilotlog.txt
[2025-07-22 18:25:29] 2025-07-23 01:24:56,072 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 18:25:29] - Log from pilotlog.txt -
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | found no stored workdir sizes
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | WARNING  | wrong length of table data, x=[1753233759.0], y=[786.0] (must be same and length>=4)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | ..............................
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . Timing measurements:
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . get job = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . initial setup = 2 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . payload setup = 3 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . stage-in = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . payload execution = 14 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . stage-out = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . log creation = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | ..............................
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742557040/pilotlog.txt
[2025-07-22 18:25:29] 2025-07-23 01:24:56,072 | WARNING  | 
[2025-07-22 18:25:29] [begin log extracts]
[2025-07-22 18:25:29] - Log from pilotlog.txt -
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | WARNING  | found no stored workdir sizes
[2025-07-22 18:25:29] 2025-07-23 01:24:56,060 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | WARNING  | wrong length of table data, x=[1753233759.0], y=[786.0] (must be same and length>=4)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | ..............................
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . Timing measurements:
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . get job = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . initial setup = 2 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,061 | INFO     | . payload setup = 3 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . stage-in = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . payload execution = 14 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . stage-out = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | . log creation = 0 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | ..............................
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 18:25:29] 2025-07-23 01:24:56,062 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742557040/pilotlog.txt
[2025-07-22 18:25:29] [end log extracts]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,072 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,073 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 18:25:29] 2025-07-23 01:24:56,499 | INFO     | 
[2025-07-22 18:25:29] 2025-07-23 01:24:56,499 | INFO     | job summary report
[2025-07-22 18:25:29] 2025-07-23 01:24:56,499 | INFO     | --------------------------------------------------
[2025-07-22 18:25:29] 2025-07-23 01:24:56,499 | INFO     | PanDA job id: 6742557040
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | task id: 45697541
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 18:22:45,932 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | pilot state: failed 
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | transexitcode: 65
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | exeerrorcode: 65
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | exitcode: 65
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | cpuconsumptiontime: 15 s
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | nevents: 0
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | neventsw: 0
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | pid: 375033
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | pgrp: 375033
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | corecount: 12
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | event service: False
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | sizes: {0: 2397503, 3: 2397765, 11: 2397793, 21: 2420995, 22: 2420971, 23: 2425291, 25: 2425447, 144: 2425613}
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | --------------------------------------------------
[2025-07-22 18:25:29] 2025-07-23 01:24:56,500 | INFO     | 
[2025-07-22 18:25:29] 2025-07-23 01:24:56,501 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | job 6742557040 has completed (purged errors)
[2025-07-22 18:25:29] 2025-07-23 01:24:56,516 | INFO     | overall cleanup function is called
[2025-07-22 18:25:29] 2025-07-23 01:24:57,521 | INFO     | --- collectZombieJob: --- 10, [375033]
[2025-07-22 18:25:29] 2025-07-23 01:24:57,521 | INFO     | zombie collector waiting for pid 375033
[2025-07-22 18:25:29] 2025-07-23 01:24:57,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 18:25:29] 2025-07-23 01:24:57,521 | INFO     | collected zombie processes
[2025-07-22 18:25:29] 2025-07-23 01:24:57,521 | INFO     | will attempt to kill all subprocesses of pid=375033
[2025-07-22 18:25:29] 2025-07-23 01:24:57,673 | INFO     | process IDs to be killed: [375033] (in reverse order)
[2025-07-22 18:25:29] 2025-07-23 01:24:57,732 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 18:25:29] 2025-07-23 01:24:57,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 18:25:29] 2025-07-23 01:24:57,739 | INFO     | did not find any defunct processes belonging to 375033
[2025-07-22 18:25:29] 2025-07-23 01:24:57,745 | INFO     | did not find any defunct processes belonging to 375033
[2025-07-22 18:25:29] 2025-07-23 01:24:57,745 | INFO     | ready for new job
[2025-07-22 18:25:29] 2025-07-23 01:24:57,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 18:25:29] 2025-07-23 01:24:57,747 | INFO     | ***************************************
[2025-07-22 18:25:29] 2025-07-23 01:24:57,747 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 18:25:29] 2025-07-23 01:24:57,747 | INFO     | ***************************************
[2025-07-22 18:25:29] 2025-07-23 01:24:57,747 | INFO     | 
[2025-07-22 18:25:29] 2025-07-23 01:24:57,749 | INFO     | architecture information:
[2025-07-22 18:25:29] 2025-07-23 01:24:57,750 | INFO     | executing command: cat /etc/os-release
[2025-07-22 18:25:29] 2025-07-23 01:24:57,760 | INFO     | cat /etc/os-release:
[2025-07-22 18:25:29] NAME="CentOS Linux"
[2025-07-22 18:25:29] VERSION="7 (Core)"
[2025-07-22 18:25:29] ID="centos"
[2025-07-22 18:25:29] ID_LIKE="rhel fedora"
[2025-07-22 18:25:29] VERSION_ID="7"
[2025-07-22 18:25:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 18:25:29] ANSI_COLOR="0;31"
[2025-07-22 18:25:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 18:25:29] HOME_URL="https://www.centos.org/"
[2025-07-22 18:25:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 18:25:29] 
[2025-07-22 18:25:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 18:25:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 18:25:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 18:25:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 18:25:29] 
[2025-07-22 18:25:29] 2025-07-23 01:24:57,760 | INFO     | ***************************************
[2025-07-22 18:25:29] 2025-07-23 01:24:58,263 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 18:25:29] 2025-07-23 01:24:58,274 | INFO     | sufficient remaining disk space (2050799697920 B)
[2025-07-22 18:25:29] 2025-07-23 01:24:58,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 18:25:29] 2025-07-23 01:24:58,275 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 18:25:29] 2025-07-23 01:24:58,275 | INFO     | update_server=False
[2025-07-22 18:25:29] 2025-07-23 01:24:58,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 18:25:29] 2025-07-23 01:24:58,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 18:25:29] 2025-07-23 01:24:58,567 | INFO     | all job control threads have been joined
[2025-07-22 18:25:29] 2025-07-23 01:24:59,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 18:25:29] 2025-07-23 01:24:59,062 | INFO     | aborting loop
[2025-07-22 18:25:29] 2025-07-23 01:24:59,237 | INFO     | all payload control threads have been joined
[2025-07-22 18:25:29] 2025-07-23 01:24:59,276 | INFO     | [job] retrieve thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:24:59,279 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:24:59,376 | INFO     | all data control threads have been joined
[2025-07-22 18:25:29] 2025-07-23 01:24:59,417 | INFO     | [payload] validate_post thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:24:59,573 | INFO     | [job] control thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:24:59,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 18:25:29] 2025-07-23 01:24:59,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:24:59,975 | INFO     | [payload] failed_post thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,067 | INFO     | [job] job monitor thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,242 | INFO     | [payload] control thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,281 | INFO     | [data] copytool_out thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,381 | INFO     | [data] control thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,578 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,587 | INFO     | [job] validate thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,630 | INFO     | [data] copytool_in thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:00,708 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:01,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 18:25:29] 2025-07-23 01:25:02,146 | INFO     | [job] queue monitor thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:03,793 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 18:25:29] 2025-07-23 01:25:05,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348733507392)>', '<ExcThread(monitor, started 140347879433984)>']
[2025-07-22 18:25:29] 2025-07-23 01:25:10,120 | INFO     | all workflow threads have been joined
[2025-07-22 18:25:29] 2025-07-23 01:25:10,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 18:25:29] 2025-07-23 01:25:10,121 | INFO     | traces error code: 0
[2025-07-22 18:25:29] 2025-07-23 01:25:10,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 18:25:29] 2025-07-23 01:25:29,066 | INFO     | PID=368687 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | INFO     | .. there are 21 such processes running
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | CRITICAL | thread 'MainThread' is not alive
[2025-07-22 18:25:29] 2025-07-23 01:25:29,067 | INFO     | [monitor] control thread has ended
[2025-07-22 18:25:29] 2025-07-23 01:25:29,183 [wrapper] ==== pilot stdout END ====
[2025-07-22 18:25:29] 2025-07-23 01:25:29,184 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 18:25:29] 2025-07-23 01:25:29,186 [wrapper] pilotpid: 368687
[2025-07-22 18:25:29] 2025-07-23 01:25:29,188 [wrapper] Pilot exit status: 0
[2025-07-22 18:25:29] 2025-07-23 01:25:29,193 [wrapper] pandaids: 6742557040
[2025-07-22 18:25:29] 2025-07-23 01:25:29,229 [wrapper] cleanup supervisor_pilot  368693 368688
[2025-07-22 18:25:29] 2025-07-23 01:25:29,231 [wrapper] Test setup, not cleaning
[2025-07-22 18:25:29] 2025-07-23 01:25:29,232 [wrapper] apfmon messages muted
[2025-07-22 18:25:29] 2025-07-23 01:25:29,234 [wrapper] ==== wrapper stdout END ====
[2025-07-22 18:25:29] 2025-07-23 01:25:29,236 [wrapper] ==== wrapper stderr END ====
[2025-07-22 18:25:29]  *** Error codes and diagnostics ***
[2025-07-22 18:25:29]     "exeErrorCode": 65,
[2025-07-22 18:25:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 18:25:29]     "pilotErrorCode": 1305,
[2025-07-22 18:25:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 18:25:29]  *** Listing of results directory ***
[2025-07-22 18:25:29] total 338716
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc    530466 Jul 22 14:11 pilot3.tar.gz
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc      5112 Jul 22 14:20 queuedata.json
[2025-07-22 18:25:29] -rwx------. 1 boinc boinc     36292 Jul 22 14:25 runpilot2-wrapper.sh
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc       100 Jul 22 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 18:25:29] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 18:22 run_atlas
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc       105 Jul 22 18:22 job.xml
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc      6596 Jul 22 18:22 init_data.xml
[2025-07-22 18:25:29] -rw-r--r--. 2 boinc boinc 342777978 Jul 22 18:22 EVNT.45697539._000150.pool.root.1
[2025-07-22 18:25:29] -rw-r--r--. 2 boinc boinc     15095 Jul 22 18:22 start_atlas.sh
[2025-07-22 18:25:29] drwxrwx--x. 2 boinc boinc      4096 Jul 22 18:22 shared
[2025-07-22 18:25:29] -rw-r--r--. 2 boinc boinc    542901 Jul 22 18:22 input.tar.gz
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc         0 Jul 22 18:22 boinc_lockfile
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc      2593 Jul 22 18:22 pandaJob.out
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc    977736 Jul 22 18:22 agis_schedconf.cvmfs.json
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc   1593031 Jul 22 18:22 agis_ddmendpoints.agis.ALL.json
[2025-07-22 18:25:29] drwx------. 4 boinc boinc      4096 Jul 22 18:22 pilot3
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc       521 Jul 22 18:22 boinc_task_state.xml
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc       944 Jul 22 18:22 memory_monitor_summary.json
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc     20797 Jul 22 18:22 log.45697541._004567.job.log.tgz.1
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc      8367 Jul 22 18:24 heartbeat.json
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc      8192 Jul 22 18:25 boinc_mmap_file
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc        22 Jul 22 18:25 wrapper_checkpoint.txt
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc        95 Jul 22 18:25 pilot_heartbeat.json
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc       892 Jul 22 18:25 pilotlog.txt
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc     74475 Jul 22 18:25 log.45697541._004567.job.log.1
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc       188 Jul 22 18:25 output.list
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc       620 Jul 22 18:25 runtime_log
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc    112640 Jul 22 18:25 result.tar.gz
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc       644 Jul 22 18:25 RwDNDm4eZy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhFKLDmB9bl0m.diag
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc      8485 Jul 22 18:25 runtime_log.err
[2025-07-22 18:25:29] -rw-r--r--. 1 boinc boinc     21630 Jul 22 18:25 stderr.txt
[2025-07-22 18:25:29] No HITS result produced
[2025-07-22 18:25:29]  *** Contents of shared directory: ***
[2025-07-22 18:25:29] total 335412
[2025-07-22 18:25:29] -rw-r--r--. 2 boinc boinc 342777978 Jul 22 18:22 ATLAS.root_0
[2025-07-22 18:25:29] -rw-r--r--. 2 boinc boinc     15095 Jul 22 18:22 start_atlas.sh
[2025-07-22 18:25:29] -rw-r--r--. 2 boinc boinc    542901 Jul 22 18:22 input.tar.gz
[2025-07-22 18:25:29] -rw-------. 1 boinc boinc    112640 Jul 22 18:25 result.tar.gz
18:25:30 (365097): run_atlas exited; CPU time 18.546763
18:25:30 (365097): called boinc_finish(0)

</stderr_txt>
]]>

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