Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:45 (332923): wrapper (7.7.26015): starting
18:07:45 (332923): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 18:07:45] Arguments: --nthreads 8
[2025-07-22 18:07:45] Threads: 8
[2025-07-22 18:07:45] Checking for CVMFS
[2025-07-22 18:07:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 18:07:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 18:07:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 18:07:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 18:07:46] 2.11.3.0 21318 472465 149416 148639 3 436 35734993 45568000 14721 130560 0 2518503026 99.765 1979849291 19186 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-22 18:07:46] CVMFS is ok
[2025-07-22 18:07:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 18:07:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 18:07:46] Further information can be found at the LHC@home message board.
[2025-07-22 18:07:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 18:07:46] Checking for apptainer binary...
[2025-07-22 18:07:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 18:07:46] Running /usr/bin/apptainer --version
[2025-07-22 18:07:46] apptainer version 1.3.3-1.el9
[2025-07-22 18:07:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 18:07:47] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0024.triumf.lcg
[2025-07-22 18:07:47] apptainer works
[2025-07-22 18:07:47] Set ATHENA_PROC_NUMBER=8
[2025-07-22 18:07:47] Set ATHENA_CORE_NUMBER=8
[2025-07-22 18:07:47] Starting ATLAS job with PandaID=6742556681
[2025-07-22 18:07:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 18:12:59]  *** The last 200 lines of the pilot log: ***
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 18:13:00] 2025-07-23 01:12:24,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 18:13:00] 2025-07-23 01:12:24,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | WARNING  | wrong length of table data, x=[1753232985.0], y=[1118.0] (must be same and length>=4)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | ..............................
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . Timing measurements:
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . get job = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . initial setup = 6 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . payload setup = 22 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . stage-in = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . payload execution = 37 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . stage-out = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . log creation = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | ..............................
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742556681/pilotlog.txt
[2025-07-22 18:13:00] 2025-07-23 01:12:24,845 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 18:13:00] - Log from pilotlog.txt -
[2025-07-22 18:13:00] 2025-07-23 01:12:24,780 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742556681/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | INFO     | extracted standard info from prmon json
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 18:13:00] 2025-07-23 01:12:24,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 18:13:00] 2025-07-23 01:12:24,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | WARNING  | wrong length of table data, x=[1753232985.0], y=[1118.0] (must be same and length>=4)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | ..............................
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . Timing measurements:
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . get job = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . initial setup = 6 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . payload setup = 22 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . stage-in = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . payload execution = 37 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . stage-out = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . log creation = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | ..............................
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742556681/pilotlog.txt
[2025-07-22 18:13:00] 2025-07-23 01:12:24,845 | WARNING  | 
[2025-07-22 18:13:00] [begin log extracts]
[2025-07-22 18:13:00] - Log from pilotlog.txt -
[2025-07-22 18:13:00] 2025-07-23 01:12:24,780 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742556681/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | INFO     | extracted standard info from prmon json
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 18:13:00] 2025-07-23 01:12:24,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 18:13:00] 2025-07-23 01:12:24,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 18:13:00] 2025-07-23 01:12:24,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | WARNING  | wrong length of table data, x=[1753232985.0], y=[1118.0] (must be same and length>=4)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | ..............................
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . Timing measurements:
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . get job = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,788 | INFO     | . initial setup = 6 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . payload setup = 22 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . stage-in = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . payload execution = 37 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . stage-out = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | . log creation = 0 s
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | ..............................
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 18:13:00] 2025-07-23 01:12:24,789 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742556681/pilotlog.txt
[2025-07-22 18:13:00] [end log extracts]
[2025-07-22 18:13:00] 2025-07-23 01:12:24,845 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 18:13:00] 2025-07-23 01:12:24,846 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 18:13:00] 2025-07-23 01:12:25,247 | INFO     | 
[2025-07-22 18:13:00] 2025-07-23 01:12:25,247 | INFO     | job summary report
[2025-07-22 18:13:00] 2025-07-23 01:12:25,247 | INFO     | --------------------------------------------------
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | PanDA job id: 6742556681
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | task id: 45697541
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 18:10:03,375 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | pilot state: failed 
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | transexitcode: 65
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | exeerrorcode: 65
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | exitcode: 65
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | cpuconsumptiontime: 16 s
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | nevents: 0
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | neventsw: 0
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | pid: 342860
[2025-07-22 18:13:00] 2025-07-23 01:12:25,248 | INFO     | pgrp: 342860
[2025-07-22 18:13:00] 2025-07-23 01:12:25,249 | INFO     | corecount: 8
[2025-07-22 18:13:00] 2025-07-23 01:12:25,249 | INFO     | event service: False
[2025-07-22 18:13:00] 2025-07-23 01:12:25,249 | INFO     | sizes: {0: 2397278, 1: 2397362, 2: 2397561, 13: 2397561, 20: 2397879, 24: 2397907, 64: 2421430, 65: 2425722, 69: 2425750, 195: 2425916}
[2025-07-22 18:13:00] 2025-07-23 01:12:25,249 | INFO     | --------------------------------------------------
[2025-07-22 18:13:00] 2025-07-23 01:12:25,249 | INFO     | 
[2025-07-22 18:13:00] 2025-07-23 01:12:25,249 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 18:13:00] 2025-07-23 01:12:25,297 | INFO     | job 6742556681 has completed (purged errors)
[2025-07-22 18:13:00] 2025-07-23 01:12:25,297 | INFO     | overall cleanup function is called
[2025-07-22 18:13:00] 2025-07-23 01:12:26,303 | INFO     | --- collectZombieJob: --- 10, [342860]
[2025-07-22 18:13:00] 2025-07-23 01:12:26,303 | INFO     | zombie collector waiting for pid 342860
[2025-07-22 18:13:00] 2025-07-23 01:12:26,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 18:13:00] 2025-07-23 01:12:26,304 | INFO     | collected zombie processes
[2025-07-22 18:13:00] 2025-07-23 01:12:26,304 | INFO     | will attempt to kill all subprocesses of pid=342860
[2025-07-22 18:13:00] 2025-07-23 01:12:27,357 | INFO     | process IDs to be killed: [342860] (in reverse order)
[2025-07-22 18:13:00] 2025-07-23 01:12:27,701 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 18:13:00] 2025-07-23 01:12:27,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 18:13:00] 2025-07-23 01:12:27,725 | INFO     | did not find any defunct processes belonging to 342860
[2025-07-22 18:13:00] 2025-07-23 01:12:27,733 | INFO     | did not find any defunct processes belonging to 342860
[2025-07-22 18:13:00] 2025-07-23 01:12:27,734 | INFO     | ready for new job
[2025-07-22 18:13:00] 2025-07-23 01:12:27,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 18:13:00] 2025-07-23 01:12:27,736 | INFO     | ***************************************
[2025-07-22 18:13:00] 2025-07-23 01:12:27,736 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 18:13:00] 2025-07-23 01:12:27,736 | INFO     | ***************************************
[2025-07-22 18:13:00] 2025-07-23 01:12:27,736 | INFO     | 
[2025-07-22 18:13:00] 2025-07-23 01:12:27,751 | INFO     | architecture information:
[2025-07-22 18:13:00] 2025-07-23 01:12:27,753 | INFO     | executing command: cat /etc/os-release
[2025-07-22 18:13:00] 2025-07-23 01:12:27,791 | INFO     | cat /etc/os-release:
[2025-07-22 18:13:00] NAME="CentOS Linux"
[2025-07-22 18:13:00] VERSION="7 (Core)"
[2025-07-22 18:13:00] ID="centos"
[2025-07-22 18:13:00] ID_LIKE="rhel fedora"
[2025-07-22 18:13:00] VERSION_ID="7"
[2025-07-22 18:13:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 18:13:00] ANSI_COLOR="0;31"
[2025-07-22 18:13:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 18:13:00] HOME_URL="https://www.centos.org/"
[2025-07-22 18:13:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 18:13:00] 
[2025-07-22 18:13:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 18:13:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 18:13:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 18:13:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 18:13:00] 
[2025-07-22 18:13:00] 2025-07-23 01:12:27,791 | INFO     | ***************************************
[2025-07-22 18:13:00] 2025-07-23 01:12:28,295 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 18:13:00] 2025-07-23 01:12:28,309 | INFO     | sufficient remaining disk space (1213871423488 B)
[2025-07-22 18:13:00] 2025-07-23 01:12:28,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 18:13:00] 2025-07-23 01:12:28,310 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 18:13:00] 2025-07-23 01:12:28,310 | INFO     | update_server=False
[2025-07-22 18:13:00] 2025-07-23 01:12:28,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 18:13:00] 2025-07-23 01:12:28,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 18:13:00] 2025-07-23 01:12:28,310 | INFO     | aborting loop
[2025-07-22 18:13:00] 2025-07-23 01:12:28,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 18:13:00] 2025-07-23 01:12:28,679 | INFO     | all data control threads have been joined
[2025-07-22 18:13:00] 2025-07-23 01:12:29,206 | INFO     | all job control threads have been joined
[2025-07-22 18:13:00] 2025-07-23 01:12:29,315 | INFO     | [job] retrieve thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:29,316 | INFO     | [job] job monitor thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:29,319 | INFO     | all payload control threads have been joined
[2025-07-22 18:13:00] 2025-07-23 01:12:29,352 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:29,629 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:29,694 | INFO     | [data] control thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:29,983 | INFO     | [job] validate thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 18:13:00] 2025-07-23 01:12:30,212 | INFO     | [job] control thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,263 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,326 | INFO     | [payload] control thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,435 | INFO     | [data] copytool_in thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,475 | INFO     | [payload] failed_post thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,487 | INFO     | [payload] validate_post thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:30,632 | INFO     | [data] copytool_out thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:31,141 | INFO     | [job] queue monitor thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:31,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 18:13:00] 2025-07-23 01:12:35,720 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 18:13:00] 2025-07-23 01:12:36,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653169837888)>', '<ExcThread(monitor, started 139652363167488)>']
[2025-07-22 18:13:00] 2025-07-23 01:12:41,032 | INFO     | all workflow threads have been joined
[2025-07-22 18:13:00] 2025-07-23 01:12:41,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 18:13:00] 2025-07-23 01:12:41,033 | INFO     | traces error code: 0
[2025-07-22 18:13:00] 2025-07-23 01:12:41,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 18:13:00] 2025-07-23 01:12:59,341 | INFO     | PID=336524 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 18:13:00] 2025-07-23 01:12:59,342 | INFO     | .. there are 33 such processes running
[2025-07-22 18:13:00] 2025-07-23 01:12:59,342 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 18:13:00] 2025-07-23 01:12:59,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 18:13:00] 2025-07-23 01:12:59,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 18:13:00] 2025-07-23 01:12:59,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 18:13:00] 2025-07-23 01:12:59,342 | INFO     | [monitor] control thread has ended
[2025-07-22 18:13:00] 2025-07-23 01:12:59,701 [wrapper] ==== pilot stdout END ====
[2025-07-22 18:13:00] 2025-07-23 01:12:59,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 18:13:00] 2025-07-23 01:12:59,705 [wrapper] pilotpid: 336524
[2025-07-22 18:13:00] 2025-07-23 01:12:59,706 [wrapper] Pilot exit status: 0
[2025-07-22 18:13:00] 2025-07-23 01:12:59,723 [wrapper] pandaids: 6742556681
[2025-07-22 18:13:00] 2025-07-23 01:12:59,784 [wrapper] cleanup supervisor_pilot  336530 336525
[2025-07-22 18:13:00] 2025-07-23 01:12:59,785 [wrapper] Test setup, not cleaning
[2025-07-22 18:13:00] 2025-07-23 01:12:59,787 [wrapper] apfmon messages muted
[2025-07-22 18:13:00] 2025-07-23 01:12:59,789 [wrapper] ==== wrapper stdout END ====
[2025-07-22 18:13:00] 2025-07-23 01:12:59,790 [wrapper] ==== wrapper stderr END ====
[2025-07-22 18:13:00]  *** Error codes and diagnostics ***
[2025-07-22 18:13:00]     "exeErrorCode": 65,
[2025-07-22 18:13:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 18:13:00]     "pilotErrorCode": 1305,
[2025-07-22 18:13:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 18:13:00]  *** Listing of results directory ***
[2025-07-22 18:13:00] total 340624
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc    530466 Jul 22 13:12 pilot3.tar.gz
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc      5112 Jul 22 14:05 queuedata.json
[2025-07-22 18:13:00] -rwx------. 1 boinc boinc     36292 Jul 22 14:07 runpilot2-wrapper.sh
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc       100 Jul 22 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 18:13:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 18:07 run_atlas
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc       105 Jul 22 18:07 job.xml
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc      6449 Jul 22 18:07 init_data.xml
[2025-07-22 18:13:00] -rw-r--r--. 2 boinc boinc 344723057 Jul 22 18:07 EVNT.45697539._000138.pool.root.1
[2025-07-22 18:13:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 18:07 start_atlas.sh
[2025-07-22 18:13:00] drwxrwx--x. 2 boinc boinc      4096 Jul 22 18:07 shared
[2025-07-22 18:13:00] -rw-r--r--. 2 boinc boinc    542900 Jul 22 18:07 input.tar.gz
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc         0 Jul 22 18:07 boinc_lockfile
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc      2594 Jul 22 18:07 pandaJob.out
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc    977736 Jul 22 18:08 agis_schedconf.cvmfs.json
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc   1593031 Jul 22 18:08 agis_ddmendpoints.agis.ALL.json
[2025-07-22 18:13:00] drwx------. 4 boinc boinc      4096 Jul 22 18:08 pilot3
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc       964 Jul 22 18:10 memory_monitor_summary.json
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc     21419 Jul 22 18:10 log.45697541._004270.job.log.tgz.1
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc      8395 Jul 22 18:12 heartbeat.json
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc        95 Jul 22 18:12 pilot_heartbeat.json
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc       524 Jul 22 18:12 boinc_task_state.xml
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc        22 Jul 22 18:12 wrapper_checkpoint.txt
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc       822 Jul 22 18:12 pilotlog.txt
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc     79643 Jul 22 18:12 log.45697541._004270.job.log.1
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc       188 Jul 22 18:12 output.list
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc       620 Jul 22 18:12 runtime_log
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc    122880 Jul 22 18:12 result.tar.gz
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc      8192 Jul 22 18:12 boinc_mmap_file
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc      8648 Jul 22 18:12 runtime_log.err
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc       645 Jul 22 18:12 iIwMDmmNZy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmCKLDmxDiVbm.diag
[2025-07-22 18:13:00] -rw-r--r--. 1 boinc boinc     21980 Jul 22 18:13 stderr.txt
[2025-07-22 18:13:00] No HITS result produced
[2025-07-22 18:13:00]  *** Contents of shared directory: ***
[2025-07-22 18:13:00] total 337316
[2025-07-22 18:13:00] -rw-r--r--. 2 boinc boinc 344723057 Jul 22 18:07 ATLAS.root_0
[2025-07-22 18:13:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 18:07 start_atlas.sh
[2025-07-22 18:13:00] -rw-r--r--. 2 boinc boinc    542900 Jul 22 18:07 input.tar.gz
[2025-07-22 18:13:00] -rw-------. 1 boinc boinc    122880 Jul 22 18:12 result.tar.gz
18:13:02 (332923): run_atlas exited; CPU time 27.047009
18:13:02 (332923): called boinc_finish(0)

</stderr_txt>
]]>

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