Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:52:07 (1337205): wrapper (7.7.26015): starting
17:52:07 (1337205): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 17:52:07] Arguments: --nthreads 8
[2025-07-22 17:52:07] Threads: 8
[2025-07-22 17:52:07] Checking for CVMFS
[2025-07-22 17:52:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 17:52:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 17:52:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 17:52:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 17:52:08] 2.11.3.0 231875 472456 191060 148639 1 224 44219270 45568000 10419 130560 0 2560761518 99.772 1890006299 19053 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 17:52:08] CVMFS is ok
[2025-07-22 17:52:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 17:52:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 17:52:08] Further information can be found at the LHC@home message board.
[2025-07-22 17:52:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 17:52:08] Checking for apptainer binary...
[2025-07-22 17:52:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 17:52:08] Running /usr/bin/apptainer --version
[2025-07-22 17:52:09] apptainer version 1.3.3-1.el9
[2025-07-22 17:52:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 17:52:11] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0019.triumf.lcg
[2025-07-22 17:52:11] apptainer works
[2025-07-22 17:52:11] Set ATHENA_PROC_NUMBER=8
[2025-07-22 17:52:11] Set ATHENA_CORE_NUMBER=8
[2025-07-22 17:52:11] Starting ATLAS job with PandaID=6742556633
[2025-07-22 17:52:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 17:58:44]  *** The last 200 lines of the pilot log: ***
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | wrong length of table data, x=[1753232082.0], y=[1058.0] (must be same and length>=4)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | ..............................
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . Timing measurements:
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . get job = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . initial setup = 9 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . payload setup = 33 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . stage-in = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . payload execution = 69 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . stage-out = 1 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . log creation = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | ..............................
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 17:58:44] 2025-07-23 00:58:08,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742556633/pilotlog.txt
[2025-07-22 17:58:44] 2025-07-23 00:58:08,074 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 17:58:44] - Log from pilotlog.txt -
[2025-07-22 17:58:44] 2025-07-23 00:58:08,002 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742556633/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | INFO     | extracted standard info from prmon json
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | wrong length of table data, x=[1753232082.0], y=[1058.0] (must be same and length>=4)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | ..............................
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . Timing measurements:
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . get job = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . initial setup = 9 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . payload setup = 33 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . stage-in = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . payload execution = 69 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . stage-out = 1 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . log creation = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | ..............................
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 17:58:44] 2025-07-23 00:58:08,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742556633/pilotlog.txt
[2025-07-22 17:58:44] 2025-07-23 00:58:08,075 | WARNING  | 
[2025-07-22 17:58:44] [begin log extracts]
[2025-07-22 17:58:44] - Log from pilotlog.txt -
[2025-07-22 17:58:44] 2025-07-23 00:58:08,002 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742556633/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | INFO     | extracted standard info from prmon json
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 17:58:44] 2025-07-23 00:58:08,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | WARNING  | wrong length of table data, x=[1753232082.0], y=[1058.0] (must be same and length>=4)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,004 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | ..............................
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . Timing measurements:
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . get job = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . initial setup = 9 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . payload setup = 33 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . stage-in = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . payload execution = 69 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . stage-out = 1 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | . log creation = 0 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | ..............................
[2025-07-22 17:58:44] 2025-07-23 00:58:08,005 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 17:58:44] 2025-07-23 00:58:08,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742556633/pilotlog.txt
[2025-07-22 17:58:44] [end log extracts]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,075 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,076 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 17:58:44] 2025-07-23 00:58:08,532 | INFO     | 
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | job summary report
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | --------------------------------------------------
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | PanDA job id: 6742556633
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | task id: 45697541
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 17:55:37,303 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | pilot state: failed 
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | transexitcode: 65
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | exeerrorcode: 65
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | exitcode: 65
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,533 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | nevents: 0
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | neventsw: 0
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | pid: 1347282
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | pgrp: 1347282
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | corecount: 8
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | event service: False
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | sizes: {0: 2396680, 1: 2397362, 2: 2397390, 3: 2397561, 4: 2397589, 15: 2397617, 26: 2397773, 28: 2398063, 37: 2398091, 107: 2421395, 108: 2425687, 109: 2425995, 2
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | --------------------------------------------------
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | 
[2025-07-22 17:58:44] 2025-07-23 00:58:08,534 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 17:58:44] 2025-07-23 00:58:08,709 | INFO     | job 6742556633 has completed (purged errors)
[2025-07-22 17:58:44] 2025-07-23 00:58:08,709 | INFO     | overall cleanup function is called
[2025-07-22 17:58:44] 2025-07-23 00:58:09,757 | INFO     | --- collectZombieJob: --- 10, [1347282]
[2025-07-22 17:58:44] 2025-07-23 00:58:09,757 | INFO     | zombie collector waiting for pid 1347282
[2025-07-22 17:58:44] 2025-07-23 00:58:09,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 17:58:44] 2025-07-23 00:58:09,758 | INFO     | collected zombie processes
[2025-07-22 17:58:44] 2025-07-23 00:58:09,758 | INFO     | will attempt to kill all subprocesses of pid=1347282
[2025-07-22 17:58:44] 2025-07-23 00:58:10,713 | INFO     | process IDs to be killed: [1347282] (in reverse order)
[2025-07-22 17:58:44] 2025-07-23 00:58:10,867 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 17:58:44] 2025-07-23 00:58:10,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 17:58:44] 2025-07-23 00:58:10,906 | INFO     | did not find any defunct processes belonging to 1347282
[2025-07-22 17:58:44] 2025-07-23 00:58:10,961 | INFO     | did not find any defunct processes belonging to 1347282
[2025-07-22 17:58:44] 2025-07-23 00:58:10,961 | INFO     | ready for new job
[2025-07-22 17:58:44] 2025-07-23 00:58:10,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 17:58:44] 2025-07-23 00:58:10,977 | INFO     | ***************************************
[2025-07-22 17:58:44] 2025-07-23 00:58:10,978 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 17:58:44] 2025-07-23 00:58:10,978 | INFO     | ***************************************
[2025-07-22 17:58:44] 2025-07-23 00:58:10,978 | INFO     | 
[2025-07-22 17:58:44] 2025-07-23 00:58:10,999 | INFO     | architecture information:
[2025-07-22 17:58:44] 2025-07-23 00:58:11,019 | INFO     | executing command: cat /etc/os-release
[2025-07-22 17:58:44] 2025-07-23 00:58:11,072 | INFO     | cat /etc/os-release:
[2025-07-22 17:58:44] NAME="CentOS Linux"
[2025-07-22 17:58:44] VERSION="7 (Core)"
[2025-07-22 17:58:44] ID="centos"
[2025-07-22 17:58:44] ID_LIKE="rhel fedora"
[2025-07-22 17:58:44] VERSION_ID="7"
[2025-07-22 17:58:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 17:58:44] ANSI_COLOR="0;31"
[2025-07-22 17:58:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 17:58:44] HOME_URL="https://www.centos.org/"
[2025-07-22 17:58:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 17:58:44] 
[2025-07-22 17:58:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 17:58:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 17:58:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 17:58:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 17:58:44] 
[2025-07-22 17:58:44] 2025-07-23 00:58:11,073 | INFO     | ***************************************
[2025-07-22 17:58:44] 2025-07-23 00:58:11,576 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 17:58:44] 2025-07-23 00:58:11,734 | INFO     | sufficient remaining disk space (1343865487360 B)
[2025-07-22 17:58:44] 2025-07-23 00:58:11,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 17:58:44] 2025-07-23 00:58:11,735 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 17:58:44] 2025-07-23 00:58:11,735 | INFO     | update_server=False
[2025-07-22 17:58:44] 2025-07-23 00:58:11,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 17:58:44] 2025-07-23 00:58:11,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 17:58:44] 2025-07-23 00:58:11,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 17:58:44] 2025-07-23 00:58:11,741 | INFO     | aborting loop
[2025-07-22 17:58:44] 2025-07-23 00:58:11,818 | INFO     | all data control threads have been joined
[2025-07-22 17:58:44] 2025-07-23 00:58:12,741 | INFO     | [job] retrieve thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:12,747 | INFO     | [job] job monitor thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:12,824 | INFO     | [data] control thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:12,860 | INFO     | [data] copytool_in thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:12,929 | INFO     | all payload control threads have been joined
[2025-07-22 17:58:44] 2025-07-23 00:58:12,989 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:13,017 | INFO     | all job control threads have been joined
[2025-07-22 17:58:44] 2025-07-23 00:58:13,023 | INFO     | [payload] validate_post thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:13,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:13,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 17:58:44] 2025-07-23 00:58:13,744 | INFO     | [data] copytool_out thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:13,766 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:13,935 | INFO     | [payload] control thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:13,965 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:14,024 | INFO     | [job] control thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:14,103 | INFO     | [payload] failed_post thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:14,214 | INFO     | [job] validate thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:14,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 17:58:44] 2025-07-23 00:58:14,531 | INFO     | [job] queue monitor thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:18,300 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 17:58:44] 2025-07-23 00:58:19,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310388737856)>', '<ExcThread(monitor, started 140309862278912)>']
[2025-07-22 17:58:44] 2025-07-23 00:58:24,824 | INFO     | all workflow threads have been joined
[2025-07-22 17:58:44] 2025-07-23 00:58:24,824 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 17:58:44] 2025-07-23 00:58:24,825 | INFO     | traces error code: 0
[2025-07-22 17:58:44] 2025-07-23 00:58:24,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 17:58:44] 2025-07-23 00:58:42,614 | INFO     | PID=1340937 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 17:58:44] 2025-07-23 00:58:42,614 | INFO     | .. there are 19 such processes running
[2025-07-22 17:58:44] 2025-07-23 00:58:42,615 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 17:58:44] 2025-07-23 00:58:42,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 17:58:44] 2025-07-23 00:58:42,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 17:58:44] 2025-07-23 00:58:42,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 17:58:44] 2025-07-23 00:58:42,615 | INFO     | [monitor] control thread has ended
[2025-07-22 17:58:44] 2025-07-23 00:58:42,885 [wrapper] ==== pilot stdout END ====
[2025-07-22 17:58:44] 2025-07-23 00:58:42,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 17:58:44] 2025-07-23 00:58:42,911 [wrapper] pilotpid: 1340937
[2025-07-22 17:58:44] 2025-07-23 00:58:42,912 [wrapper] Pilot exit status: 0
[2025-07-22 17:58:44] 2025-07-23 00:58:43,113 [wrapper] pandaids: 6742556633
[2025-07-22 17:58:44] 2025-07-23 00:58:43,371 [wrapper] cleanup supervisor_pilot 1340943 1340938
[2025-07-22 17:58:44] 2025-07-23 00:58:43,406 [wrapper] Test setup, not cleaning
[2025-07-22 17:58:44] 2025-07-23 00:58:43,434 [wrapper] apfmon messages muted
[2025-07-22 17:58:44] 2025-07-23 00:58:43,483 [wrapper] ==== wrapper stdout END ====
[2025-07-22 17:58:44] 2025-07-23 00:58:43,533 [wrapper] ==== wrapper stderr END ====
[2025-07-22 17:58:44]  *** Error codes and diagnostics ***
[2025-07-22 17:58:44]     "exeErrorCode": 65,
[2025-07-22 17:58:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 17:58:44]     "pilotErrorCode": 1305,
[2025-07-22 17:58:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 17:58:44]  *** Listing of results directory ***
[2025-07-22 17:58:44] total 342396
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc    530466 Jul 22 13:12 pilot3.tar.gz
[2025-07-22 17:58:44] -rwx------. 1 boinc boinc     36292 Jul 22 14:05 runpilot2-wrapper.sh
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc      5112 Jul 22 14:05 queuedata.json
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc       100 Jul 22 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 17:58:44] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 17:52 run_atlas
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc       105 Jul 22 17:52 job.xml
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc      6449 Jul 22 17:52 init_data.xml
[2025-07-22 17:58:44] -rw-r--r--. 2 boinc boinc 346531488 Jul 22 17:52 EVNT.45697539._000136.pool.root.1
[2025-07-22 17:58:44] -rw-r--r--. 2 boinc boinc     15095 Jul 22 17:52 start_atlas.sh
[2025-07-22 17:58:44] drwxrwx--x. 2 boinc boinc      4096 Jul 22 17:52 shared
[2025-07-22 17:58:44] -rw-r--r--. 2 boinc boinc    542897 Jul 22 17:52 input.tar.gz
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc         0 Jul 22 17:52 boinc_lockfile
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc      2594 Jul 22 17:52 pandaJob.out
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc    977736 Jul 22 17:52 agis_schedconf.cvmfs.json
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc   1593031 Jul 22 17:52 agis_ddmendpoints.agis.ALL.json
[2025-07-22 17:58:44] drwx------. 4 boinc boinc      4096 Jul 22 17:53 pilot3
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc       525 Jul 22 17:55 boinc_task_state.xml
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc       948 Jul 22 17:55 memory_monitor_summary.json
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc     21765 Jul 22 17:55 log.45697541._004222.job.log.tgz.1
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc        95 Jul 22 17:57 pilot_heartbeat.json
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc      8390 Jul 22 17:58 heartbeat.json
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc      8192 Jul 22 17:58 boinc_mmap_file
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc        23 Jul 22 17:58 wrapper_checkpoint.txt
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc       823 Jul 22 17:58 pilotlog.txt
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc     84036 Jul 22 17:58 log.45697541._004222.job.log.1
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc       188 Jul 22 17:58 output.list
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc       620 Jul 22 17:58 runtime_log
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc    122880 Jul 22 17:58 result.tar.gz
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc      8648 Jul 22 17:58 runtime_log.err
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc       647 Jul 22 17:58 EJALDm4LZy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTSvKDmrU56fm.diag
[2025-07-22 17:58:44] -rw-r--r--. 1 boinc boinc     22021 Jul 22 17:58 stderr.txt
[2025-07-22 17:58:44] No HITS result produced
[2025-07-22 17:58:44]  *** Contents of shared directory: ***
[2025-07-22 17:58:44] total 339084
[2025-07-22 17:58:44] -rw-r--r--. 2 boinc boinc 346531488 Jul 22 17:52 ATLAS.root_0
[2025-07-22 17:58:44] -rw-r--r--. 2 boinc boinc     15095 Jul 22 17:52 start_atlas.sh
[2025-07-22 17:58:44] -rw-r--r--. 2 boinc boinc    542897 Jul 22 17:52 input.tar.gz
[2025-07-22 17:58:44] -rw-------. 1 boinc boinc    122880 Jul 22 17:58 result.tar.gz
17:58:46 (1337205): run_atlas exited; CPU time 28.847474
17:58:46 (1337205): called boinc_finish(0)

</stderr_txt>
]]>

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