Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:15 (3797559): wrapper (7.7.26015): starting
20:39:15 (3797559): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 20:39:15] Arguments: --nthreads 12
[2025-07-22 20:39:15] Threads: 12
[2025-07-22 20:39:15] Checking for CVMFS
[2025-07-22 20:39:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 20:39:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 20:39:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 20:39:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 20:39:16] 2.13.0.0 1071838 11911 294948 148639 1 207 19123285 32935937 16127 16776704 0 40586500 99.537 48673558 9067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-22 20:39:16] CVMFS is ok
[2025-07-22 20:39:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 20:39:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 20:39:16] Further information can be found at the LHC@home message board.
[2025-07-22 20:39:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 20:39:16] Checking for apptainer binary...
[2025-07-22 20:39:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 20:39:16] Running /usr/bin/apptainer --version
[2025-07-22 20:39:16] apptainer version 1.4.1-1.el9
[2025-07-22 20:39:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 20:39:16] c-8-39.aglt2.org
[2025-07-22 20:39:16] apptainer works
[2025-07-22 20:39:16] Set ATHENA_PROC_NUMBER=12
[2025-07-22 20:39:16] Set ATHENA_CORE_NUMBER=12
[2025-07-22 20:39:16] Starting ATLAS job with PandaID=6742271725
[2025-07-22 20:39:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 23:50:44]  *** The last 200 lines of the pilot log: ***
[2025-07-22 23:50:44] 2025-07-23 03:50:09,261 | INFO     | PID=3807334 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-22 23:50:44] 2025-07-23 03:50:09,261 | INFO     | .. there are 26 such processes running
[2025-07-22 23:50:44] 2025-07-23 03:50:10,623 | INFO     | monitor loop #689: job 0:6742271725 is in state 'finished'
[2025-07-22 23:50:44] 2025-07-23 03:50:10,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,216 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 23:50:44] 2025-07-23 03:50:11,221 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2763.9769375
[2025-07-22 23:50:44] 2025-07-23 03:50:11,226 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6742271725/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,227 | INFO     | extracted standard info from prmon json
[2025-07-22 23:50:44] 2025-07-23 03:50:11,227 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 23:50:44] 2025-07-23 03:50:11,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 23:50:44] 2025-07-23 03:50:11,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 23:50:44] 2025-07-23 03:50:11,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 23:50:44] 2025-07-23 03:50:11,229 | INFO     | fitting pss+swap vs Time
[2025-07-22 23:50:44] 2025-07-23 03:50:11,230 | INFO     | sum of square deviations: 2027646882.8235228
[2025-07-22 23:50:44] 2025-07-23 03:50:11,230 | INFO     | sum of deviations: -12223873600.647058
[2025-07-22 23:50:44] 2025-07-23 03:50:11,230 | INFO     | mean x: 1753236879.2941177
[2025-07-22 23:50:44] 2025-07-23 03:50:11,230 | INFO     | mean y: 2412753.0481283423
[2025-07-22 23:50:44] 2025-07-23 03:50:11,231 | INFO     | -- intersect: 10571977989.496395
[2025-07-22 23:50:44] 2025-07-23 03:50:11,231 | INFO     | intersect: 10571977989.496395
[2025-07-22 23:50:44] 2025-07-23 03:50:11,231 | INFO     | chi2: 2.185862808192853
[2025-07-22 23:50:44] 2025-07-23 03:50:11,231 | INFO     | sum of square deviations: 1869325804.8791232
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | sum of deviations: -9809359150.461538
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | mean x: 1753236726.8021977
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | mean y: 2415042.653846154
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | -- intersect: 9202592285.215618
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | intersect: 9202592285.215618
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | chi2: 2.1770962818672825
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | current chi2=2.1770962818672825 (change=0.40105565146688943 %)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,232 | INFO     | right removable region: 181
[2025-07-22 23:50:44] 2025-07-23 03:50:11,233 | INFO     | sum of square deviations: 1869292254.8791232
[2025-07-22 23:50:44] 2025-07-23 03:50:11,233 | INFO     | sum of deviations: -45306048164.74721
[2025-07-22 23:50:44] 2025-07-23 03:50:11,233 | INFO     | mean x: 1753237031.8021977
[2025-07-22 23:50:44] 2025-07-23 03:50:11,233 | INFO     | mean y: 2444363.868131868
[2025-07-22 23:50:44] 2025-07-23 03:50:11,233 | INFO     | -- intersect: 42495661355.335976
[2025-07-22 23:50:44] 2025-07-23 03:50:11,234 | INFO     | intersect: 42495661355.335976
[2025-07-22 23:50:44] 2025-07-23 03:50:11,234 | INFO     | chi2: 0.4628775406101768
[2025-07-22 23:50:44] 2025-07-23 03:50:11,234 | INFO     | current chi2=0.4628775406101768 (change=78.82403511898089 %)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,234 | INFO     | sum of square deviations: 1719424861.1299372
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | sum of deviations: -48393322470.04518
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | mean x: 1753237184.2994351
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | mean y: 2447424.548022599
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | -- intersect: 49347419888.4915
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | intersect: 49347419888.4915
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | chi2: 0.3798057029239372
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | current chi2=0.3798057029239372 (change=17.946828350481677 %)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | left removable region: 20
[2025-07-22 23:50:44] 2025-07-23 03:50:11,235 | INFO     | sum of square deviations: 1294028180.472046
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | sum of deviations: -32416671471.180138
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | mean x: 1753237306.310559
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | mean y: 2436449.2236024844
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | -- intersect: 43922745625.91696
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | intersect: 43922745625.91696
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | chi2: 0.3434773223845539
[2025-07-22 23:50:44] 2025-07-23 03:50:11,236 | INFO     | -- intersect: 43922745625.91696
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | current memory leak: -25.05 B/s (using 161 data points, chi2=0.34)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | could have reported an average CPU frequency of 2705 MHz (10 samples)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | ..............................
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | . Timing measurements:
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | . get job = 0 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | . initial setup = 3 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | . payload setup = 9 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | . stage-in = 0 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,237 | INFO     | . payload execution = 11401 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,238 | INFO     | . stage-out = 2 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,238 | INFO     | . log creation = 0 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,238 | INFO     | ..............................
[2025-07-22 23:50:44] 2025-07-23 03:50:11,294 | INFO     | 
[2025-07-22 23:50:44] 2025-07-23 03:50:11,294 | INFO     | job summary report
[2025-07-22 23:50:44] 2025-07-23 03:50:11,294 | INFO     | --------------------------------------------------
[2025-07-22 23:50:44] 2025-07-23 03:50:11,294 | INFO     | PanDA job id: 6742271725
[2025-07-22 23:50:44] 2025-07-23 03:50:11,294 | INFO     | task id: 45697532
[2025-07-22 23:50:44] 2025-07-23 03:50:11,294 | INFO     | errors: (none)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | pilot state: finished 
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | transexitcode: 0
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | exeerrorcode: 0
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | exeerrordiag: 
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | exitcode: 0
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | exitmsg: OK
[2025-07-22 23:50:44] 2025-07-23 03:50:11,295 | INFO     | cpuconsumptiontime: 78809 s
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | nevents: 400
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | neventsw: 0
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | pid: 3827374
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | pgrp: 3827374
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | corecount: 12
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | event service: False
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | sizes: {0: 2397365, 1: 2397564, 6: 2397826, 12: 2397854, 11415: 2427152, 11418: 2436334, 11423: 2436472}
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | --------------------------------------------------
[2025-07-22 23:50:44] 2025-07-23 03:50:11,296 | INFO     | 
[2025-07-22 23:50:44] 2025-07-23 03:50:11,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 23:50:44] 2025-07-23 03:50:11,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 23:50:44] 2025-07-23 03:50:11,318 | INFO     | job 6742271725 has completed (purged errors)
[2025-07-22 23:50:44] 2025-07-23 03:50:11,318 | INFO     | overall cleanup function is called
[2025-07-22 23:50:44] 2025-07-23 03:50:12,326 | INFO     | --- collectZombieJob: --- 10, [3827374]
[2025-07-22 23:50:44] 2025-07-23 03:50:12,326 | INFO     | zombie collector waiting for pid 3827374
[2025-07-22 23:50:44] 2025-07-23 03:50:12,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 23:50:44] 2025-07-23 03:50:12,326 | INFO     | collected zombie processes
[2025-07-22 23:50:44] 2025-07-23 03:50:12,326 | INFO     | will attempt to kill all subprocesses of pid=3827374
[2025-07-22 23:50:44] 2025-07-23 03:50:12,755 | INFO     | process IDs to be killed: [3827374] (in reverse order)
[2025-07-22 23:50:44] 2025-07-23 03:50:12,884 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 23:50:44] 2025-07-23 03:50:12,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 23:50:44] 2025-07-23 03:50:12,901 | INFO     | did not find any defunct processes belonging to 3827374
[2025-07-22 23:50:44] 2025-07-23 03:50:12,918 | INFO     | did not find any defunct processes belonging to 3827374
[2025-07-22 23:50:44] 2025-07-23 03:50:12,919 | INFO     | ready for new job
[2025-07-22 23:50:44] 2025-07-23 03:50:12,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 23:50:44] 2025-07-23 03:50:12,921 | INFO     | ***************************************
[2025-07-22 23:50:44] 2025-07-23 03:50:12,921 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 23:50:44] 2025-07-23 03:50:12,921 | INFO     | ***************************************
[2025-07-22 23:50:44] 2025-07-23 03:50:12,921 | INFO     | 
[2025-07-22 23:50:44] 2025-07-23 03:50:12,936 | INFO     | architecture information:
[2025-07-22 23:50:44] 2025-07-23 03:50:12,937 | INFO     | executing command: cat /etc/os-release
[2025-07-22 23:50:44] 2025-07-23 03:50:12,952 | INFO     | cat /etc/os-release:
[2025-07-22 23:50:44] NAME="CentOS Linux"
[2025-07-22 23:50:44] VERSION="7 (Core)"
[2025-07-22 23:50:44] ID="centos"
[2025-07-22 23:50:44] ID_LIKE="rhel fedora"
[2025-07-22 23:50:44] VERSION_ID="7"
[2025-07-22 23:50:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 23:50:44] ANSI_COLOR="0;31"
[2025-07-22 23:50:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 23:50:44] HOME_URL="https://www.centos.org/"
[2025-07-22 23:50:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 23:50:44] 
[2025-07-22 23:50:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 23:50:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 23:50:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 23:50:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 23:50:44] 
[2025-07-22 23:50:44] 2025-07-23 03:50:12,952 | INFO     | ***************************************
[2025-07-22 23:50:44] 2025-07-23 03:50:13,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 23:50:44] 2025-07-23 03:50:13,474 | INFO     | sufficient remaining disk space (76195823616 B)
[2025-07-22 23:50:44] 2025-07-23 03:50:13,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 23:50:44] 2025-07-23 03:50:13,474 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 23:50:44] 2025-07-23 03:50:13,474 | INFO     | update_server=False
[2025-07-22 23:50:44] 2025-07-23 03:50:13,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 23:50:44] 2025-07-23 03:50:13,505 | INFO     | all data control threads have been joined
[2025-07-22 23:50:44] 2025-07-23 03:50:13,631 | INFO     | all payload control threads have been joined
[2025-07-22 23:50:44] 2025-07-23 03:50:13,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 23:50:44] 2025-07-23 03:50:14,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 23:50:44] 2025-07-23 03:50:14,131 | INFO     | aborting loop
[2025-07-22 23:50:44] 2025-07-23 03:50:14,308 | INFO     | all job control threads have been joined
[2025-07-22 23:50:44] 2025-07-23 03:50:14,480 | INFO     | [job] retrieve thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:14,510 | INFO     | [data] control thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:14,612 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:14,636 | INFO     | [payload] control thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:14,769 | INFO     | [data] copytool_in thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,136 | INFO     | [job] job monitor thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,164 | INFO     | [payload] failed_post thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,316 | INFO     | [job] control thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,605 | INFO     | [job] validate thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,719 | INFO     | [payload] validate_post thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,797 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,858 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:15,885 | INFO     | [data] copytool_out thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:16,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 23:50:44] 2025-07-23 03:50:16,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 23:50:44] 2025-07-23 03:50:17,311 | INFO     | [job] queue monitor thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:20,911 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 23:50:44] 2025-07-23 03:50:22,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140685804619584)>', '<ExcThread(monitor, started 140685319587584)>']
[2025-07-22 23:50:44] 2025-07-23 03:50:27,937 | INFO     | all workflow threads have been joined
[2025-07-22 23:50:44] 2025-07-23 03:50:27,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 23:50:44] 2025-07-23 03:50:27,938 | INFO     | traces error code: 0
[2025-07-22 23:50:44] 2025-07-23 03:50:27,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 23:50:44] 2025-07-23 03:50:43,846 | INFO     | PID=3807334 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 23:50:44] 2025-07-23 03:50:43,846 | INFO     | .. there are 26 such processes running
[2025-07-22 23:50:44] 2025-07-23 03:50:43,847 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 23:50:44] 2025-07-23 03:50:43,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 23:50:44] 2025-07-23 03:50:43,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 23:50:44] 2025-07-23 03:50:43,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 23:50:44] 2025-07-23 03:50:43,848 | INFO     | [monitor] control thread has ended
[2025-07-22 23:50:44] 2025-07-23 03:50:43,998 [wrapper] ==== pilot stdout END ====
[2025-07-22 23:50:44] 2025-07-23 03:50:44,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 23:50:44] 2025-07-23 03:50:44,005 [wrapper] pilotpid: 3807334
[2025-07-22 23:50:44] 2025-07-23 03:50:44,008 [wrapper] Pilot exit status: 0
[2025-07-22 23:50:44] 2025-07-23 03:50:44,025 [wrapper] pandaids: 6742271725
[2025-07-22 23:50:44] 2025-07-23 03:50:44,108 [wrapper] cleanup supervisor_pilot  226926 3807335
[2025-07-22 23:50:44] 2025-07-23 03:50:44,115 [wrapper] Test setup, not cleaning
[2025-07-22 23:50:44] 2025-07-23 03:50:44,119 [wrapper] apfmon messages muted
[2025-07-22 23:50:44] 2025-07-23 03:50:44,123 [wrapper] ==== wrapper stdout END ====
[2025-07-22 23:50:44] 2025-07-23 03:50:44,126 [wrapper] ==== wrapper stderr END ====
[2025-07-22 23:50:44]  *** Error codes and diagnostics ***
[2025-07-22 23:50:44]     "exeErrorCode": 0,
[2025-07-22 23:50:44]     "exeErrorDiag": "",
[2025-07-22 23:50:44]     "pilotErrorCode": 0,
[2025-07-22 23:50:44]     "pilotErrorDiag": "",
[2025-07-22 23:50:44]  *** Listing of results directory ***
[2025-07-22 23:50:44] total 599272
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 08:22 pilot3.tar.gz
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 08:43 queuedata.json
[2025-07-22 23:50:44] -rwx------. 1 boincer umatlas     36292 Jul 22 08:44 runpilot2-wrapper.sh
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas       100 Jul 22 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 23:50:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 20:39 run_atlas
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas       105 Jul 22 20:39 job.xml
[2025-07-22 23:50:44] -rw-r--r--. 2 boincer umatlas 328434878 Jul 22 20:39 EVNT.45697530._000212.pool.root.1
[2025-07-22 23:50:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 20:39 start_atlas.sh
[2025-07-22 23:50:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 20:39 shared
[2025-07-22 23:50:44] -rw-r--r--. 2 boincer umatlas    542906 Jul 22 20:39 input.tar.gz
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas         0 Jul 22 20:39 boinc_lockfile
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas      2614 Jul 22 20:39 pandaJob.out
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas    977736 Jul 22 20:39 agis_schedconf.cvmfs.json
[2025-07-22 23:50:44] drwx------. 4 boincer umatlas      4096 Jul 22 20:39 pilot3
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas      6613 Jul 22 23:45 init_data.xml
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas 278603889 Jul 22 23:49 HITS.45697532._005355.pool.root.1
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas       531 Jul 22 23:49 boinc_task_state.xml
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas      1044 Jul 22 23:49 memory_monitor_summary.json
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas   1593031 Jul 22 23:50 agis_ddmendpoints.agis.ALL.json
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas    428360 Jul 22 23:50 log.45697532._005355.job.log.tgz.1
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas      7819 Jul 22 23:50 heartbeat.json
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 23:50 boinc_mmap_file
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas        28 Jul 22 23:50 wrapper_checkpoint.txt
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas        95 Jul 22 23:50 pilot_heartbeat.json
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas       823 Jul 22 23:50 pilotlog.txt
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas    945748 Jul 22 23:50 log.45697532._005355.job.log.1
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas       357 Jul 22 23:50 output.list
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas       620 Jul 22 23:50 runtime_log
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas   1392640 Jul 22 23:50 result.tar.gz
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas      8653 Jul 22 23:50 runtime_log.err
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas       655 Jul 22 23:50 NmVLDmJXRy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQOJLDm15iVJo.diag
[2025-07-22 23:50:44] -rw-r--r--. 1 boincer umatlas     21296 Jul 22 23:50 stderr.txt
[2025-07-22 23:50:44] HITS file was successfully produced:
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas 278603889 Jul 22 23:49 shared/HITS.pool.root.1
[2025-07-22 23:50:44]  *** Contents of shared directory: ***
[2025-07-22 23:50:44] total 594728
[2025-07-22 23:50:44] -rw-r--r--. 2 boincer umatlas 328434878 Jul 22 20:39 ATLAS.root_0
[2025-07-22 23:50:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 20:39 start_atlas.sh
[2025-07-22 23:50:44] -rw-r--r--. 2 boincer umatlas    542906 Jul 22 20:39 input.tar.gz
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas 278603889 Jul 22 23:49 HITS.pool.root.1
[2025-07-22 23:50:44] -rw-------. 1 boincer umatlas   1392640 Jul 22 23:50 result.tar.gz
23:50:46 (3797559): run_atlas exited; CPU time 79253.713480
23:50:46 (3797559): called boinc_finish(0)

</stderr_txt>
]]>

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