Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:33 (17758): wrapper (7.7.26015): starting
10:08:33 (17758): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 10:08:33] Arguments: --nthreads 8
[2025-07-23 10:08:33] Threads: 8
[2025-07-23 10:08:33] Checking for CVMFS
[2025-07-23 10:08:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 10:08:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 10:08:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 10:08:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 10:08:33] 2.11.2.0 22738 103523 134364 148650 2 233 22562288 25165825 2247 130560 0 79264309 99.870 46659891 3384 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 10:08:33] CVMFS is ok
[2025-07-23 10:08:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 10:08:33] Checking for apptainer binary...
[2025-07-23 10:08:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 10:08:33] Running /usr/bin/apptainer --version
[2025-07-23 10:08:33] apptainer version 1.3.2-1.el7
[2025-07-23 10:08:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 10:08:34] cg-vwn395.simple-grid.lan
[2025-07-23 10:08:34] apptainer works
[2025-07-23 10:08:34] Set ATHENA_PROC_NUMBER=8
[2025-07-23 10:08:34] Set ATHENA_CORE_NUMBER=8
[2025-07-23 10:08:34] Starting ATLAS job with PandaID=6742501219
[2025-07-23 10:08:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 16:37:12]  *** The last 200 lines of the pilot log: ***
[2025-07-23 16:37:12] 2025-07-23 14:30:16,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 16:37:12] 2025-07-23 14:30:16,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 16:37:12] 2025-07-23 14:30:16,982 | INFO     | fitting pss+swap vs Time
[2025-07-23 16:37:12] 2025-07-23 14:30:16,983 | INFO     | sum of square deviations: 16091695202.0
[2025-07-23 16:37:12] 2025-07-23 14:30:16,991 | INFO     | sum of deviations: 55500855672.999985
[2025-07-23 16:37:12] 2025-07-23 14:30:16,991 | INFO     | mean x: 1753269554.0
[2025-07-23 16:37:12] 2025-07-23 14:30:16,991 | INFO     | mean y: 2544363.9544235924
[2025-07-23 16:37:12] 2025-07-23 14:30:16,991 | INFO     | -- intersect: -6044547583.221213
[2025-07-23 16:37:12] 2025-07-23 14:30:16,991 | INFO     | intersect: -6044547583.221213
[2025-07-23 16:37:12] 2025-07-23 14:30:16,992 | INFO     | chi2: 3.3791181210442613
[2025-07-23 16:37:12] 2025-07-23 14:30:16,993 | INFO     | sum of square deviations: 15453208812.0
[2025-07-23 16:37:12] 2025-07-23 14:30:16,997 | INFO     | sum of deviations: 107035907488.0
[2025-07-23 16:37:12] 2025-07-23 14:30:16,998 | INFO     | mean x: 1753269401.5
[2025-07-23 16:37:12] 2025-07-23 14:30:16,998 | INFO     | mean y: 2556571.8967391304
[2025-07-23 16:37:12] 2025-07-23 14:30:16,998 | INFO     | -- intersect: -12141379599.778355
[2025-07-23 16:37:12] 2025-07-23 14:30:16,998 | INFO     | intersect: -12141379599.778355
[2025-07-23 16:37:12] 2025-07-23 14:30:16,999 | INFO     | chi2: 1.7186242798894524
[2025-07-23 16:37:12] 2025-07-23 14:30:16,999 | INFO     | current chi2=1.7186242798894524 (change=49.13985784674673 %)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,000 | INFO     | sum of square deviations: 14831839022.0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,004 | INFO     | sum of deviations: 105391581544.99998
[2025-07-23 16:37:12] 2025-07-23 14:30:17,004 | INFO     | mean x: 1753269249.0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,005 | INFO     | mean y: 2556168.3250688706
[2025-07-23 16:37:12] 2025-07-23 14:30:17,005 | INFO     | -- intersect: -12455765335.315937
[2025-07-23 16:37:12] 2025-07-23 14:30:17,005 | INFO     | intersect: -12455765335.315937
[2025-07-23 16:37:12] 2025-07-23 14:30:17,005 | INFO     | chi2: 1.7184553171744479
[2025-07-23 16:37:12] 2025-07-23 14:30:17,006 | INFO     | current chi2=1.7184553171744479 (change=0.009831277084914599 %)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,006 | INFO     | right removable region: 362
[2025-07-23 16:37:12] 2025-07-23 14:30:17,006 | INFO     | sum of square deviations: 15453208812.0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,011 | INFO     | sum of deviations: -13421556536.999992
[2025-07-23 16:37:12] 2025-07-23 14:30:17,011 | INFO     | mean x: 1753269706.5
[2025-07-23 16:37:12] 2025-07-23 14:30:17,011 | INFO     | mean y: 2560748.7717391304
[2025-07-23 16:37:12] 2025-07-23 14:30:17,011 | INFO     | -- intersect: 1525325941.2103446
[2025-07-23 16:37:12] 2025-07-23 14:30:17,011 | INFO     | intersect: 1525325941.2103446
[2025-07-23 16:37:12] 2025-07-23 14:30:17,012 | INFO     | chi2: 1.7854930061932954
[2025-07-23 16:37:12] 2025-07-23 14:30:17,012 | INFO     | current chi2=1.7854930061932954 (change=47.16097685151303 %)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,013 | INFO     | sum of square deviations: 14831839022.0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,017 | INFO     | sum of deviations: -30693737403.000004
[2025-07-23 16:37:12] 2025-07-23 14:30:17,017 | INFO     | mean x: 1753269859.0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,018 | INFO     | mean y: 2564986.4159779614
[2025-07-23 16:37:12] 2025-07-23 14:30:17,018 | INFO     | -- intersect: 3630867894.026974
[2025-07-23 16:37:12] 2025-07-23 14:30:17,018 | INFO     | intersect: 3630867894.026974
[2025-07-23 16:37:12] 2025-07-23 14:30:17,018 | INFO     | chi2: 1.696982110163197
[2025-07-23 16:37:12] 2025-07-23 14:30:17,019 | INFO     | current chi2=1.696982110163197 (change=4.957224459747693 %)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,019 | INFO     | left removable region: 20
[2025-07-23 16:37:12] 2025-07-23 14:30:17,019 | INFO     | sum of square deviations: 12403750705.5
[2025-07-23 16:37:12] 2025-07-23 14:30:17,024 | INFO     | sum of deviations: 14003035316.000002
[2025-07-23 16:37:12] 2025-07-23 14:30:17,024 | INFO     | mean x: 1753269828.5
[2025-07-23 16:37:12] 2025-07-23 14:30:17,024 | INFO     | mean y: 2579336.1461988306
[2025-07-23 16:37:12] 2025-07-23 14:30:17,024 | INFO     | -- intersect: -1976749329.0192869
[2025-07-23 16:37:12] 2025-07-23 14:30:17,024 | INFO     | intersect: -1976749329.0192869
[2025-07-23 16:37:12] 2025-07-23 14:30:17,025 | INFO     | chi2: 0.0077018772409321945
[2025-07-23 16:37:12] 2025-07-23 14:30:17,025 | INFO     | -- intersect: -1976749329.0192869
[2025-07-23 16:37:12] 2025-07-23 14:30:17,025 | INFO     | current memory leak: 1.13 B/s (using 342 data points, chi2=0.01)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,026 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,026 | INFO     | ..............................
[2025-07-23 16:37:12] 2025-07-23 14:30:17,026 | INFO     | . Timing measurements:
[2025-07-23 16:37:12] 2025-07-23 14:30:17,026 | INFO     | . get job = 0 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,026 | INFO     | . initial setup = 1 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,027 | INFO     | . payload setup = 29 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,027 | INFO     | . stage-in = 0 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,027 | INFO     | . payload execution = 22730 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,027 | INFO     | . stage-out = 3 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,027 | INFO     | . log creation = 1 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,027 | INFO     | ..............................
[2025-07-23 16:37:12] 2025-07-23 14:30:17,182 | INFO     | 
[2025-07-23 16:37:12] 2025-07-23 14:30:17,182 | INFO     | job summary report
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | --------------------------------------------------
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | PanDA job id: 6742501219
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | task id: 45697541
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | errors: (none)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | pilot state: finished 
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | transexitcode: 0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | exeerrorcode: 0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | exeerrordiag: 
[2025-07-23 16:37:12] 2025-07-23 14:30:17,183 | INFO     | exitcode: 0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | exitmsg: OK
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | cpuconsumptiontime: 88582 s
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | nevents: 400
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | neventsw: 0
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | pid: 1010
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | pgrp: 1010
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | corecount: 8
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | event service: False
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | sizes: {0: 2397335, 1: 2397534, 10: 2397796, 12: 2397824, 22763: 2431489, 22764: 2431488, 22767: 2440670, 22768: 2440726, 22863: 2440920}
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | --------------------------------------------------
[2025-07-23 16:37:12] 2025-07-23 14:30:17,184 | INFO     | 
[2025-07-23 16:37:12] 2025-07-23 14:30:17,185 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 16:37:12] 2025-07-23 14:30:17,309 | INFO     | job 6742501219 has completed (purged errors)
[2025-07-23 16:37:12] 2025-07-23 14:30:17,309 | INFO     | overall cleanup function is called
[2025-07-23 16:37:12] 2025-07-23 14:30:18,321 | INFO     | --- collectZombieJob: --- 10, [1010]
[2025-07-23 16:37:12] 2025-07-23 14:30:18,321 | INFO     | zombie collector waiting for pid 1010
[2025-07-23 16:37:12] 2025-07-23 14:30:18,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 16:37:12] 2025-07-23 14:30:18,322 | INFO     | collected zombie processes
[2025-07-23 16:37:12] 2025-07-23 14:30:18,322 | INFO     | will attempt to kill all subprocesses of pid=1010
[2025-07-23 16:37:12] 2025-07-23 14:30:18,445 | INFO     | process IDs to be killed: [1010] (in reverse order)
[2025-07-23 16:37:12] 2025-07-23 14:30:19,223 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 16:37:12] 2025-07-23 14:30:19,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 16:37:12] 2025-07-23 14:30:19,226 | INFO     | did not find any defunct processes belonging to 1010
[2025-07-23 16:37:12] 2025-07-23 14:30:19,230 | INFO     | did not find any defunct processes belonging to 1010
[2025-07-23 16:37:12] 2025-07-23 14:30:19,230 | INFO     | ready for new job
[2025-07-23 16:37:12] 2025-07-23 14:30:19,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 16:37:12] 2025-07-23 14:30:19,232 | INFO     | ***************************************
[2025-07-23 16:37:12] 2025-07-23 14:30:19,233 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 16:37:12] 2025-07-23 14:30:19,233 | INFO     | ***************************************
[2025-07-23 16:37:12] 2025-07-23 14:30:19,233 | INFO     | 
[2025-07-23 16:37:12] 2025-07-23 14:30:19,233 | INFO     | pilot is running in a VM
[2025-07-23 16:37:12] 2025-07-23 14:30:19,234 | INFO     | architecture information:
[2025-07-23 16:37:12] 2025-07-23 14:30:19,236 | INFO     | executing command: cat /etc/os-release
[2025-07-23 16:37:12] 2025-07-23 14:30:19,349 | INFO     | cat /etc/os-release:
[2025-07-23 16:37:12] NAME="CentOS Linux"
[2025-07-23 16:37:12] VERSION="7 (Core)"
[2025-07-23 16:37:12] ID="centos"
[2025-07-23 16:37:12] ID_LIKE="rhel fedora"
[2025-07-23 16:37:12] VERSION_ID="7"
[2025-07-23 16:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 16:37:12] ANSI_COLOR="0;31"
[2025-07-23 16:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 16:37:12] HOME_URL="https://www.centos.org/"
[2025-07-23 16:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 16:37:12] 
[2025-07-23 16:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 16:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 16:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 16:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 16:37:12] 
[2025-07-23 16:37:12] 2025-07-23 14:30:19,349 | INFO     | ***************************************
[2025-07-23 16:37:12] 2025-07-23 14:30:19,852 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-23 16:37:12] 2025-07-23 14:30:20,137 | INFO     | sufficient remaining disk space (496587767808 B)
[2025-07-23 16:37:12] 2025-07-23 14:30:20,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 16:37:12] 2025-07-23 14:30:20,137 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 16:37:12] 2025-07-23 14:30:20,137 | INFO     | update_server=False
[2025-07-23 16:37:12] 2025-07-23 14:30:20,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 16:37:12] 2025-07-23 14:30:20,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:37:12] 2025-07-23 14:30:20,138 | INFO     | aborting loop
[2025-07-23 16:37:12] 2025-07-23 14:30:20,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 16:37:12] 2025-07-23 14:30:20,606 | INFO     | all payload control threads have been joined
[2025-07-23 16:37:12] 2025-07-23 14:30:20,737 | INFO     | all data control threads have been joined
[2025-07-23 16:37:12] 2025-07-23 14:30:21,010 | INFO     | all job control threads have been joined
[2025-07-23 16:37:12] 2025-07-23 14:30:21,144 | INFO     | [job] job monitor thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:21,146 | INFO     | [job] retrieve thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:21,408 | INFO     | [payload] validate_post thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:21,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:21,612 | INFO     | [payload] control thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:21,743 | INFO     | [data] control thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:21,872 | INFO     | [job] validate thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,015 | INFO     | [job] control thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 16:37:12] 2025-07-23 14:30:22,149 | INFO     | [data] copytool_out thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,165 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:37:12] 2025-07-23 14:30:22,332 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,478 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,579 | INFO     | [data] copytool_in thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:22,710 | INFO     | [payload] failed_post thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:23,203 | INFO     | [job] queue monitor thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:26,123 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 16:37:12] 2025-07-23 14:30:26,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662020740928)>', '<ExcThread(monitor, started 140661428832000)>']
[2025-07-23 16:37:12] 2025-07-23 14:30:31,759 | INFO     | all workflow threads have been joined
[2025-07-23 16:37:12] 2025-07-23 14:30:31,759 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 16:37:12] 2025-07-23 14:30:31,760 | INFO     | traces error code: 0
[2025-07-23 16:37:12] 2025-07-23 14:30:31,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 16:37:12] 2025-07-23 14:30:50,354 | INFO     | PID=21404 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 16:37:12] 2025-07-23 14:30:50,354 | INFO     | .. there are 9 such processes running
[2025-07-23 16:37:12] 2025-07-23 14:30:50,355 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 16:37:12] 2025-07-23 14:30:50,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 16:37:12] 2025-07-23 14:30:50,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 16:37:12] 2025-07-23 14:30:50,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 16:37:12] 2025-07-23 14:30:50,355 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 16:37:12] 2025-07-23 14:30:50,355 | INFO     | [monitor] control thread has ended
[2025-07-23 16:37:12] 2025-07-23 14:30:50,659 [wrapper] ==== pilot stdout END ====
[2025-07-23 16:37:12] 2025-07-23 14:30:50,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 16:37:12] 2025-07-23 14:30:50,774 [wrapper] pilotpid: 21404
[2025-07-23 16:37:12] 2025-07-23 14:30:50,820 [wrapper] Pilot exit status: 0
[2025-07-23 16:37:12] 2025-07-23 14:30:51,188 [wrapper] pandaids: 6742501219
[2025-07-23 16:37:12] 2025-07-23 14:30:52,109 [wrapper] cleanup supervisor_pilot 31663 21405
[2025-07-23 16:37:12] 2025-07-23 14:30:52,154 [wrapper] Test setup, not cleaning
[2025-07-23 16:37:12] 2025-07-23 14:30:52,203 [wrapper] apfmon messages muted
[2025-07-23 16:37:12] 2025-07-23 14:30:52,264 [wrapper] ==== wrapper stdout END ====
[2025-07-23 16:37:12] 2025-07-23 14:30:52,334 [wrapper] ==== wrapper stderr END ====
[2025-07-23 16:37:12]  *** Error codes and diagnostics ***
[2025-07-23 16:37:12]     "exeErrorCode": 0,
[2025-07-23 16:37:12]     "exeErrorDiag": "",
[2025-07-23 16:37:12]     "pilotErrorCode": 0,
[2025-07-23 16:37:12]     "pilotErrorDiag": "",
[2025-07-23 16:37:12]  *** Listing of results directory ***
[2025-07-23 16:37:12] total 642352
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc    530466 Jul 22 18:21 pilot3.tar.gz
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc      5112 Jul 22 18:51 queuedata.json
[2025-07-23 16:37:12] -rwx------. 1 boinc boinc     36292 Jul 22 18:52 runpilot2-wrapper.sh
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc       100 Jul 23 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 16:37:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 10:08 run_atlas
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc       105 Jul 23 10:08 job.xml
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc      6391 Jul 23 10:08 init_data.xml
[2025-07-23 16:37:12] -rw-r--r--. 2 boinc boinc 342542347 Jul 23 10:08 EVNT.45697539._000220.pool.root.1
[2025-07-23 16:37:12] -rw-r--r--. 2 boinc boinc     15095 Jul 23 10:08 start_atlas.sh
[2025-07-23 16:37:12] drwxrwx--x. 2 boinc boinc        68 Jul 23 10:08 shared
[2025-07-23 16:37:12] -rw-r--r--. 2 boinc boinc    542902 Jul 23 10:08 input.tar.gz
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc         0 Jul 23 10:08 boinc_lockfile
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc      2593 Jul 23 10:08 pandaJob.out
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc    977736 Jul 23 10:08 agis_schedconf.cvmfs.json
[2025-07-23 16:37:12] drwx------. 4 boinc boinc      4096 Jul 23 10:08 pilot3
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc 306555641 Jul 23 16:27 HITS.45697541._002001.pool.root.1
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc       531 Jul 23 16:27 boinc_task_state.xml
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc      1032 Jul 23 16:28 memory_monitor_summary.json
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc   1593041 Jul 23 16:28 agis_ddmendpoints.agis.ALL.json
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc    461208 Jul 23 16:28 log.45697541._002001.job.log.tgz.1
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc        95 Jul 23 16:30 pilot_heartbeat.json
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc      7775 Jul 23 16:30 heartbeat.json
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc       890 Jul 23 16:30 pilotlog.txt
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc   1943922 Jul 23 16:30 log.45697541._002001.job.log.1
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc       357 Jul 23 16:30 output.list
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc       620 Jul 23 16:30 runtime_log
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc   2426880 Jul 23 16:30 result.tar.gz
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc       658 Jul 23 16:30 xGeMDmSPVy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBEvKDmBao5Xn.diag
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc      8660 Jul 23 16:30 runtime_log.err
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc      8192 Jul 23 16:37 boinc_mmap_file
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc        28 Jul 23 16:37 wrapper_checkpoint.txt
[2025-07-23 16:37:12] -rw-r--r--. 1 boinc boinc     20602 Jul 23 16:37 stderr.txt
[2025-07-23 16:37:12] HITS file was successfully produced:
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc 306555641 Jul 23 16:27 shared/HITS.pool.root.1
[2025-07-23 16:37:12]  *** Contents of shared directory: ***
[2025-07-23 16:37:12] total 636808
[2025-07-23 16:37:12] -rw-r--r--. 2 boinc boinc 342542347 Jul 23 10:08 ATLAS.root_0
[2025-07-23 16:37:12] -rw-r--r--. 2 boinc boinc     15095 Jul 23 10:08 start_atlas.sh
[2025-07-23 16:37:12] -rw-r--r--. 2 boinc boinc    542902 Jul 23 10:08 input.tar.gz
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc 306555641 Jul 23 16:27 HITS.pool.root.1
[2025-07-23 16:37:12] -rw-------. 1 boinc boinc   2426880 Jul 23 16:30 result.tar.gz
16:37:14 (17758): run_atlas exited; CPU time 88881.809281
16:37:14 (17758): called boinc_finish(0)

</stderr_txt>
]]>

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