Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:40 (26001): wrapper (7.7.26015): starting
12:34:40 (26001): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 12:34:40] Arguments: --nthreads 8
[2025-07-23 12:34:40] Threads: 8
[2025-07-23 12:34:40] Checking for CVMFS
[2025-07-23 12:34:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 12:34:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 12:34:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 12:34:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 12:34:43] 2.11.2.0 11346 29677 108868 148655 1 263 13221044 25165825 2663 130560 0 25686510 99.886 7776785 4897 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 12:34:43] CVMFS is ok
[2025-07-23 12:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 12:34:43] Checking for apptainer binary...
[2025-07-23 12:34:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 12:34:43] Running /usr/bin/apptainer --version
[2025-07-23 12:34:43] apptainer version 1.3.2-1.el7
[2025-07-23 12:34:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 13:06:07] cg-vwn408.simple-grid.lan
[2025-07-23 13:06:07] apptainer works
[2025-07-23 13:06:07] Set ATHENA_PROC_NUMBER=8
[2025-07-23 13:06:07] Set ATHENA_CORE_NUMBER=8
[2025-07-23 13:06:07] Starting ATLAS job with PandaID=6741760447
[2025-07-23 13:06:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 21:04:52]  *** The last 200 lines of the pilot log: ***
[2025-07-23 21:04:52] 2025-07-23 17:27:28,563 | INFO     | monitor loop #1611: job 0:6741760447 is in state 'finished'
[2025-07-23 21:04:52] 2025-07-23 17:27:28,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 21:04:52] 2025-07-23 17:27:29,592 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-23 21:04:52] 2025-07-23 17:27:29,594 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6741760447/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,595 | INFO     | extracted standard info from prmon json
[2025-07-23 21:04:52] 2025-07-23 17:27:29,595 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 21:04:52] 2025-07-23 17:27:29,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 21:04:52] 2025-07-23 17:27:29,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 21:04:52] 2025-07-23 17:27:29,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 21:04:52] 2025-07-23 17:27:29,619 | INFO     | fitting pss+swap vs Time
[2025-07-23 21:04:52] 2025-07-23 17:27:29,620 | INFO     | sum of square deviations: 14831839022.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,625 | INFO     | sum of deviations: 11092303928.00002
[2025-07-23 21:04:52] 2025-07-23 17:27:29,625 | INFO     | mean x: 1753280491.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,625 | INFO     | mean y: 2542085.785123967
[2025-07-23 21:04:52] 2025-07-23 17:27:29,625 | INFO     | -- intersect: -1308685742.9661245
[2025-07-23 21:04:52] 2025-07-23 17:27:29,626 | INFO     | intersect: -1308685742.9661245
[2025-07-23 21:04:52] 2025-07-23 17:27:29,626 | INFO     | chi2: 6.519869865390382
[2025-07-23 21:04:52] 2025-07-23 17:27:29,627 | INFO     | sum of square deviations: 14227353269.5
[2025-07-23 21:04:52] 2025-07-23 17:27:29,631 | INFO     | sum of deviations: 60838232331.000015
[2025-07-23 21:04:52] 2025-07-23 17:27:29,631 | INFO     | mean x: 1753280338.5
[2025-07-23 21:04:52] 2025-07-23 17:27:29,632 | INFO     | mean y: 2554530.4022346367
[2025-07-23 21:04:52] 2025-07-23 17:27:29,632 | INFO     | -- intersect: -7494727258.734501
[2025-07-23 21:04:52] 2025-07-23 17:27:29,632 | INFO     | intersect: -7494727258.734501
[2025-07-23 21:04:52] 2025-07-23 17:27:29,632 | INFO     | chi2: 4.969448715737816
[2025-07-23 21:04:52] 2025-07-23 17:27:29,633 | INFO     | current chi2=4.969448715737816 (change=23.779940116331343 %)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,633 | INFO     | right removable region: 357
[2025-07-23 21:04:52] 2025-07-23 17:27:29,633 | INFO     | sum of square deviations: 14227353269.5
[2025-07-23 21:04:52] 2025-07-23 17:27:29,638 | INFO     | sum of deviations: -113382765887.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,638 | INFO     | mean x: 1753280643.5
[2025-07-23 21:04:52] 2025-07-23 17:27:29,645 | INFO     | mean y: 2573454.1731843576
[2025-07-23 21:04:52] 2025-07-23 17:27:29,646 | INFO     | -- intersect: 13975081549.711283
[2025-07-23 21:04:52] 2025-07-23 17:27:29,646 | INFO     | intersect: 13975081549.711283
[2025-07-23 21:04:52] 2025-07-23 17:27:29,646 | INFO     | chi2: 2.310414514777541
[2025-07-23 21:04:52] 2025-07-23 17:27:29,646 | INFO     | current chi2=2.310414514777541 (change=64.56348727078155 %)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,647 | INFO     | sum of square deviations: 13639518992.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,651 | INFO     | sum of deviations: -142341608939.00006
[2025-07-23 21:04:52] 2025-07-23 17:27:29,651 | INFO     | mean x: 1753280796.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,651 | INFO     | mean y: 2580925.311614731
[2025-07-23 21:04:52] 2025-07-23 17:27:29,651 | INFO     | -- intersect: 18299766447.09345
[2025-07-23 21:04:52] 2025-07-23 17:27:29,651 | INFO     | intersect: 18299766447.09345
[2025-07-23 21:04:52] 2025-07-23 17:27:29,652 | INFO     | chi2: 1.928500027023348
[2025-07-23 21:04:52] 2025-07-23 17:27:29,652 | INFO     | current chi2=1.928500027023348 (change=16.5301284817701 %)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,652 | INFO     | left removable region: 20
[2025-07-23 21:04:52] 2025-07-23 17:27:29,653 | INFO     | sum of square deviations: 11867638328.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,656 | INFO     | sum of deviations: -85695874400.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,656 | INFO     | mean x: 1753280918.0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,657 | INFO     | mean y: 2592602.8427299703
[2025-07-23 21:04:52] 2025-07-23 17:27:29,657 | INFO     | -- intersect: 12662983590.85875
[2025-07-23 21:04:52] 2025-07-23 17:27:29,657 | INFO     | intersect: 12662983590.85875
[2025-07-23 21:04:52] 2025-07-23 17:27:29,657 | INFO     | chi2: 0.26212370488784936
[2025-07-23 21:04:52] 2025-07-23 17:27:29,657 | INFO     | -- intersect: 12662983590.85875
[2025-07-23 21:04:52] 2025-07-23 17:27:29,658 | INFO     | current memory leak: -7.22 B/s (using 337 data points, chi2=0.26)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,664 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | ..............................
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . Timing measurements:
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . get job = 0 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . initial setup = 9 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . payload setup = 141 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . stage-in = 0 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . payload execution = 22245 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,665 | INFO     | . stage-out = 4 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,666 | INFO     | . log creation = 1 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,666 | INFO     | ..............................
[2025-07-23 21:04:52] 2025-07-23 17:27:29,794 | INFO     | 
[2025-07-23 21:04:52] 2025-07-23 17:27:29,794 | INFO     | job summary report
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | --------------------------------------------------
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | PanDA job id: 6741760447
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | task id: 45697472
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | errors: (none)
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | pilot state: finished 
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | transexitcode: 0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | exeerrorcode: 0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | exeerrordiag: 
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | exitcode: 0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,795 | INFO     | exitmsg: OK
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | cpuconsumptiontime: 82212 s
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | nevents: 400
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | neventsw: 0
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | pid: 5076
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | pgrp: 5076
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | corecount: 8
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | event service: False
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | sizes: {0: 2396653, 1: 2397338, 2: 2397537, 13: 2397537, 23: 2397593, 34: 2397621, 45: 2397777, 56: 2397805, 66: 2397833, 77: 2397861, 88: 2397917, 89: 2398487, 99
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | --------------------------------------------------
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | 
[2025-07-23 21:04:52] 2025-07-23 17:27:29,796 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 21:04:52] 2025-07-23 17:27:30,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 21:04:52] 2025-07-23 17:27:30,418 | INFO     | job 6741760447 has completed (purged errors)
[2025-07-23 21:04:52] 2025-07-23 17:27:30,418 | INFO     | overall cleanup function is called
[2025-07-23 21:04:52] 2025-07-23 17:27:31,427 | INFO     | --- collectZombieJob: --- 10, [5076]
[2025-07-23 21:04:52] 2025-07-23 17:27:31,427 | INFO     | zombie collector waiting for pid 5076
[2025-07-23 21:04:52] 2025-07-23 17:27:31,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 21:04:52] 2025-07-23 17:27:31,428 | INFO     | collected zombie processes
[2025-07-23 21:04:52] 2025-07-23 17:27:31,428 | INFO     | will attempt to kill all subprocesses of pid=5076
[2025-07-23 21:04:52] 2025-07-23 17:27:31,547 | INFO     | process IDs to be killed: [5076] (in reverse order)
[2025-07-23 21:04:52] 2025-07-23 17:27:32,077 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 21:04:52] 2025-07-23 17:27:32,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 21:04:52] 2025-07-23 17:27:32,080 | INFO     | did not find any defunct processes belonging to 5076
[2025-07-23 21:04:52] 2025-07-23 17:27:32,084 | INFO     | did not find any defunct processes belonging to 5076
[2025-07-23 21:04:52] 2025-07-23 17:27:32,084 | INFO     | ready for new job
[2025-07-23 21:04:52] 2025-07-23 17:27:32,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 21:04:52] 2025-07-23 17:27:32,087 | INFO     | ***************************************
[2025-07-23 21:04:52] 2025-07-23 17:27:32,087 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 21:04:52] 2025-07-23 17:27:32,087 | INFO     | ***************************************
[2025-07-23 21:04:52] 2025-07-23 17:27:32,087 | INFO     | 
[2025-07-23 21:04:52] 2025-07-23 17:27:32,088 | INFO     | pilot is running in a VM
[2025-07-23 21:04:52] 2025-07-23 17:27:32,088 | INFO     | architecture information:
[2025-07-23 21:04:52] 2025-07-23 17:27:32,098 | INFO     | executing command: cat /etc/os-release
[2025-07-23 21:04:52] 2025-07-23 17:27:32,367 | INFO     | cat /etc/os-release:
[2025-07-23 21:04:52] NAME="CentOS Linux"
[2025-07-23 21:04:52] VERSION="7 (Core)"
[2025-07-23 21:04:52] ID="centos"
[2025-07-23 21:04:52] ID_LIKE="rhel fedora"
[2025-07-23 21:04:52] VERSION_ID="7"
[2025-07-23 21:04:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 21:04:52] ANSI_COLOR="0;31"
[2025-07-23 21:04:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 21:04:52] HOME_URL="https://www.centos.org/"
[2025-07-23 21:04:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 21:04:52] 
[2025-07-23 21:04:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 21:04:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 21:04:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 21:04:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 21:04:52] 
[2025-07-23 21:04:52] 2025-07-23 17:27:32,367 | INFO     | ***************************************
[2025-07-23 21:04:52] 2025-07-23 17:27:32,870 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-23 21:04:52] 2025-07-23 17:27:33,044 | INFO     | sufficient remaining disk space (496788045824 B)
[2025-07-23 21:04:52] 2025-07-23 17:27:33,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 21:04:52] 2025-07-23 17:27:33,045 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 21:04:52] 2025-07-23 17:27:33,045 | INFO     | update_server=False
[2025-07-23 21:04:52] 2025-07-23 17:27:33,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 21:04:52] 2025-07-23 17:27:33,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 21:04:52] 2025-07-23 17:27:33,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 21:04:52] 2025-07-23 17:27:33,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 21:04:52] 2025-07-23 17:27:33,047 | INFO     | aborting loop
[2025-07-23 21:04:52] 2025-07-23 17:27:33,126 | INFO     | all job control threads have been joined
[2025-07-23 21:04:52] 2025-07-23 17:27:33,508 | INFO     | all payload control threads have been joined
[2025-07-23 21:04:52] 2025-07-23 17:27:33,654 | INFO     | all data control threads have been joined
[2025-07-23 21:04:52] 2025-07-23 17:27:34,053 | INFO     | [job] retrieve thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,056 | INFO     | [job] job monitor thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,132 | INFO     | [job] control thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,254 | INFO     | [payload] validate_post thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,336 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,436 | INFO     | [payload] failed_post thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,466 | INFO     | [data] copytool_in thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,514 | INFO     | [payload] control thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,535 | INFO     | [job] validate thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,660 | INFO     | [data] control thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 21:04:52] 2025-07-23 17:27:34,835 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:34,906 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:35,055 | INFO     | [data] copytool_out thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:35,813 | INFO     | [job] queue monitor thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:37,053 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 21:04:52] 2025-07-23 17:27:37,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575455156032)>', '<ExcThread(monitor, started 140574724179712)>']
[2025-07-23 21:04:52] 2025-07-23 17:27:42,497 | INFO     | all workflow threads have been joined
[2025-07-23 21:04:52] 2025-07-23 17:27:42,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 21:04:52] 2025-07-23 17:27:42,498 | INFO     | traces error code: 0
[2025-07-23 21:04:52] 2025-07-23 17:27:42,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 21:04:52] 2025-07-23 17:28:02,942 | INFO     | PID=30870 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 21:04:52] 2025-07-23 17:28:02,942 | INFO     | .. there are 9 such processes running
[2025-07-23 21:04:52] 2025-07-23 17:28:02,943 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 21:04:52] 2025-07-23 17:28:02,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 21:04:52] 2025-07-23 17:28:02,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 21:04:52] 2025-07-23 17:28:02,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 21:04:52] 2025-07-23 17:28:02,943 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 21:04:52] 2025-07-23 17:28:02,944 | INFO     | [monitor] control thread has ended
[2025-07-23 21:04:52] 2025-07-23 17:28:03,303 [wrapper] ==== pilot stdout END ====
[2025-07-23 21:04:52] 2025-07-23 17:28:03,414 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 21:04:52] 2025-07-23 17:28:03,509 [wrapper] pilotpid: 30870
[2025-07-23 21:04:52] 2025-07-23 17:28:03,567 [wrapper] Pilot exit status: 0
[2025-07-23 21:04:52] 2025-07-23 17:28:04,044 [wrapper] pandaids: 6741760447
[2025-07-23 21:04:52] 2025-07-23 17:28:05,013 [wrapper] cleanup supervisor_pilot 27528 30871
[2025-07-23 21:04:52] 2025-07-23 17:28:05,115 [wrapper] Test setup, not cleaning
[2025-07-23 21:04:52] 2025-07-23 17:28:05,206 [wrapper] apfmon messages muted
[2025-07-23 21:04:52] 2025-07-23 17:28:05,304 [wrapper] ==== wrapper stdout END ====
[2025-07-23 21:04:52] 2025-07-23 17:28:05,410 [wrapper] ==== wrapper stderr END ====
[2025-07-23 21:04:52]  *** Error codes and diagnostics ***
[2025-07-23 21:04:52]     "exeErrorCode": 0,
[2025-07-23 21:04:52]     "exeErrorDiag": "",
[2025-07-23 21:04:52]     "pilotErrorCode": 0,
[2025-07-23 21:04:52]     "pilotErrorDiag": "",
[2025-07-23 21:04:52]  *** Listing of results directory ***
[2025-07-23 21:04:52] total 603276
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc    530466 Jul 22 10:26 pilot3.tar.gz
[2025-07-23 21:04:52] -rwx------. 1 boinc boinc     36292 Jul 22 10:33 runpilot2-wrapper.sh
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc      5112 Jul 22 10:33 queuedata.json
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc       100 Jul 23 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 21:04:52] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 12:34 run_atlas
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc       105 Jul 23 12:34 job.xml
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc      6391 Jul 23 12:34 init_data.xml
[2025-07-23 21:04:52] -rw-r--r--. 2 boinc boinc 329755298 Jul 23 12:34 EVNT.45697470._000055.pool.root.1
[2025-07-23 21:04:52] -rw-r--r--. 2 boinc boinc     15095 Jul 23 12:34 start_atlas.sh
[2025-07-23 21:04:52] drwxrwx--x. 2 boinc boinc        68 Jul 23 12:34 shared
[2025-07-23 21:04:52] -rw-r--r--. 2 boinc boinc    542897 Jul 23 12:34 input.tar.gz
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc         0 Jul 23 12:34 boinc_lockfile
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc      2610 Jul 23 13:06 pandaJob.out
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc    978437 Jul 23 13:09 agis_schedconf.cvmfs.json
[2025-07-23 21:04:52] drwx------. 4 boinc boinc      4096 Jul 23 13:09 pilot3
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc 279385053 Jul 23 19:24 HITS.45697472._001366.pool.root.1
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc       531 Jul 23 19:24 boinc_task_state.xml
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc      1018 Jul 23 19:25 memory_monitor_summary.json
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc   1593041 Jul 23 19:25 agis_ddmendpoints.agis.ALL.json
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc    460428 Jul 23 19:25 log.45697472._001366.job.log.tgz.1
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc      7777 Jul 23 19:27 heartbeat.json
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc        95 Jul 23 19:28 pilot_heartbeat.json
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc       890 Jul 23 19:28 pilotlog.txt
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc   1913502 Jul 23 19:28 log.45697472._001366.job.log.1
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc       357 Jul 23 19:28 output.list
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc       620 Jul 23 19:28 runtime_log
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc   2396160 Jul 23 19:28 result.tar.gz
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc       658 Jul 23 19:28 YoqLDmQcNy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXguKDmSokWTm.diag
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc      8660 Jul 23 19:28 runtime_log.err
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc      8192 Jul 23 21:04 boinc_mmap_file
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc        28 Jul 23 21:04 wrapper_checkpoint.txt
[2025-07-23 21:04:52] -rw-r--r--. 1 boinc boinc     20801 Jul 23 21:04 stderr.txt
[2025-07-23 21:04:52] HITS file was successfully produced:
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc 279385053 Jul 23 19:24 shared/HITS.pool.root.1
[2025-07-23 21:04:52]  *** Contents of shared directory: ***
[2025-07-23 21:04:52] total 597756
[2025-07-23 21:04:52] -rw-r--r--. 2 boinc boinc 329755298 Jul 23 12:34 ATLAS.root_0
[2025-07-23 21:04:52] -rw-r--r--. 2 boinc boinc     15095 Jul 23 12:34 start_atlas.sh
[2025-07-23 21:04:52] -rw-r--r--. 2 boinc boinc    542897 Jul 23 12:34 input.tar.gz
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc 279385053 Jul 23 19:24 HITS.pool.root.1
[2025-07-23 21:04:52] -rw-------. 1 boinc boinc   2396160 Jul 23 19:28 result.tar.gz
21:04:54 (26001): run_atlas exited; CPU time 82520.030996
21:04:54 (26001): called boinc_finish(0)

</stderr_txt>
]]>

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