Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:57 (3512713): wrapper (7.7.26015): starting
16:35:57 (3512713): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 16:35:57] Arguments: --nthreads 12
[2025-07-22 16:35:57] Threads: 12
[2025-07-22 16:35:57] Checking for CVMFS
[2025-07-22 16:35:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 16:35:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 16:35:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 16:35:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 16:35:58] 2.11.5.0 6480 30612 208708 148638 2 337 32498689 45568000 15150 130560 0 231750385 99.779 149483839 27312 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 16:35:58] CVMFS is ok
[2025-07-22 16:35:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 16:35:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 16:35:58] Further information can be found at the LHC@home message board.
[2025-07-22 16:35:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 16:35:58] Checking for apptainer binary...
[2025-07-22 16:35:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 16:35:58] Running /usr/bin/apptainer --version
[2025-07-22 16:35:58] apptainer version 1.4.1-1.el9
[2025-07-22 16:35:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 16:35:59] wns0056.triumf.lcg
[2025-07-22 16:35:59] apptainer works
[2025-07-22 16:35:59] Set ATHENA_PROC_NUMBER=12
[2025-07-22 16:35:59] Set ATHENA_CORE_NUMBER=12
[2025-07-22 16:35:59] Starting ATLAS job with PandaID=6742555698
[2025-07-22 16:35:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 16:40:26]  *** The last 200 lines of the pilot log: ***
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | WARNING  | wrong length of table data, x=[1753227432.0], y=[1477.0] (must be same and length>=4)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | could have reported an average CPU frequency of 2594 MHz (4 samples)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | ..............................
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . Timing measurements:
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . get job = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . initial setup = 3 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . payload setup = 10 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . stage-in = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . payload execution = 48 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . stage-out = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . log creation = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | ..............................
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555698/pilotlog.txt
[2025-07-22 16:40:26] 2025-07-22 23:39:52,762 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 16:40:26] - Log from pilotlog.txt -
[2025-07-22 16:40:26] 2025-07-22 23:39:52,675 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742555698/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,702 | INFO     | extracted standard info from prmon json
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | WARNING  | wrong length of table data, x=[1753227432.0], y=[1477.0] (must be same and length>=4)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | could have reported an average CPU frequency of 2594 MHz (4 samples)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | ..............................
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . Timing measurements:
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . get job = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . initial setup = 3 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . payload setup = 10 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . stage-in = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . payload execution = 48 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . stage-out = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . log creation = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | ..............................
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555698/pilotlog.txt
[2025-07-22 16:40:26] 2025-07-22 23:39:52,763 | WARNING  | 
[2025-07-22 16:40:26] [begin log extracts]
[2025-07-22 16:40:26] - Log from pilotlog.txt -
[2025-07-22 16:40:26] 2025-07-22 23:39:52,675 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742555698/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,702 | INFO     | extracted standard info from prmon json
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:40:26] 2025-07-22 23:39:52,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | WARNING  | wrong length of table data, x=[1753227432.0], y=[1477.0] (must be same and length>=4)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | could have reported an average CPU frequency of 2594 MHz (4 samples)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | ..............................
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . Timing measurements:
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . get job = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . initial setup = 3 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . payload setup = 10 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . stage-in = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . payload execution = 48 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . stage-out = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,704 | INFO     | . log creation = 0 s
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | ..............................
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:40:26] 2025-07-22 23:39:52,705 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555698/pilotlog.txt
[2025-07-22 16:40:26] [end log extracts]
[2025-07-22 16:40:26] 2025-07-22 23:39:52,763 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 16:40:26] 2025-07-22 23:39:52,764 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 16:40:26] 2025-07-22 23:39:53,049 | INFO     | 
[2025-07-22 16:40:26] 2025-07-22 23:39:53,049 | INFO     | job summary report
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | --------------------------------------------------
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | PanDA job id: 6742555698
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | task id: 45697541
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 16:37:37,127 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | pilot state: failed 
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | transexitcode: 65
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | exeerrorcode: 65
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | exitcode: 65
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | cpuconsumptiontime: 16 s
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | nevents: 0
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | neventsw: 0
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | pid: 3523683
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | pgrp: 3523683
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | corecount: 12
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | event service: False
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | sizes: {0: 2397333, 1: 2397361, 2: 2397560, 8: 2397822, 13: 2397850, 63: 2421260, 64: 2425552, 66: 2425608, 191: 2425774}
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | --------------------------------------------------
[2025-07-22 16:40:26] 2025-07-22 23:39:53,050 | INFO     | 
[2025-07-22 16:40:26] 2025-07-22 23:39:53,051 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | job 6742555698 has completed (purged errors)
[2025-07-22 16:40:26] 2025-07-22 23:39:53,069 | INFO     | overall cleanup function is called
[2025-07-22 16:40:26] 2025-07-22 23:39:54,076 | INFO     | --- collectZombieJob: --- 10, [3523683]
[2025-07-22 16:40:26] 2025-07-22 23:39:54,076 | INFO     | zombie collector waiting for pid 3523683
[2025-07-22 16:40:26] 2025-07-22 23:39:54,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 16:40:26] 2025-07-22 23:39:54,076 | INFO     | collected zombie processes
[2025-07-22 16:40:26] 2025-07-22 23:39:54,077 | INFO     | will attempt to kill all subprocesses of pid=3523683
[2025-07-22 16:40:26] 2025-07-22 23:39:54,743 | INFO     | process IDs to be killed: [3523683] (in reverse order)
[2025-07-22 16:40:26] 2025-07-22 23:39:54,814 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 16:40:26] 2025-07-22 23:39:54,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 16:40:26] 2025-07-22 23:39:54,848 | INFO     | did not find any defunct processes belonging to 3523683
[2025-07-22 16:40:26] 2025-07-22 23:39:54,899 | INFO     | did not find any defunct processes belonging to 3523683
[2025-07-22 16:40:26] 2025-07-22 23:39:54,900 | INFO     | ready for new job
[2025-07-22 16:40:26] 2025-07-22 23:39:54,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 16:40:26] 2025-07-22 23:39:54,902 | INFO     | ***************************************
[2025-07-22 16:40:26] 2025-07-22 23:39:54,902 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 16:40:26] 2025-07-22 23:39:54,902 | INFO     | ***************************************
[2025-07-22 16:40:26] 2025-07-22 23:39:54,902 | INFO     | 
[2025-07-22 16:40:26] 2025-07-22 23:39:54,934 | INFO     | architecture information:
[2025-07-22 16:40:26] 2025-07-22 23:39:54,938 | INFO     | executing command: cat /etc/os-release
[2025-07-22 16:40:26] 2025-07-22 23:39:54,995 | INFO     | cat /etc/os-release:
[2025-07-22 16:40:26] NAME="CentOS Linux"
[2025-07-22 16:40:26] VERSION="7 (Core)"
[2025-07-22 16:40:26] ID="centos"
[2025-07-22 16:40:26] ID_LIKE="rhel fedora"
[2025-07-22 16:40:26] VERSION_ID="7"
[2025-07-22 16:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 16:40:26] ANSI_COLOR="0;31"
[2025-07-22 16:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 16:40:26] HOME_URL="https://www.centos.org/"
[2025-07-22 16:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 16:40:26] 
[2025-07-22 16:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 16:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 16:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 16:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 16:40:26] 
[2025-07-22 16:40:26] 2025-07-22 23:39:54,995 | INFO     | ***************************************
[2025-07-22 16:40:26] 2025-07-22 23:39:55,497 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 16:40:26] 2025-07-22 23:39:55,523 | INFO     | sufficient remaining disk space (1966487896064 B)
[2025-07-22 16:40:26] 2025-07-22 23:39:55,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 16:40:26] 2025-07-22 23:39:55,524 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 16:40:26] 2025-07-22 23:39:55,524 | INFO     | update_server=False
[2025-07-22 16:40:26] 2025-07-22 23:39:55,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 16:40:26] 2025-07-22 23:39:55,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 16:40:26] 2025-07-22 23:39:55,672 | INFO     | aborting loop
[2025-07-22 16:40:26] 2025-07-22 23:39:55,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 16:40:26] 2025-07-22 23:39:55,957 | INFO     | all data control threads have been joined
[2025-07-22 16:40:26] 2025-07-22 23:39:56,529 | INFO     | [job] retrieve thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:56,677 | INFO     | [job] job monitor thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:56,723 | INFO     | all payload control threads have been joined
[2025-07-22 16:40:26] 2025-07-22 23:39:56,753 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:56,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 16:40:26] 2025-07-22 23:39:56,925 | INFO     | all job control threads have been joined
[2025-07-22 16:40:26] 2025-07-22 23:39:56,963 | INFO     | [data] control thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,100 | INFO     | [data] copytool_in thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,605 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,729 | INFO     | [payload] control thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,867 | INFO     | [payload] failed_post thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,909 | INFO     | [payload] validate_post thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,931 | INFO     | [job] control thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,945 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,974 | INFO     | [job] validate thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:57,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:58,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 16:40:26] 2025-07-22 23:39:58,881 | INFO     | [data] copytool_out thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:59,082 | INFO     | [job] queue monitor thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:39:59,876 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 16:40:26] 2025-07-22 23:40:01,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607646959424)>', '<ExcThread(monitor, started 140606877718272)>']
[2025-07-22 16:40:26] 2025-07-22 23:40:06,193 | INFO     | all workflow threads have been joined
[2025-07-22 16:40:26] 2025-07-22 23:40:06,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 16:40:26] 2025-07-22 23:40:06,194 | INFO     | traces error code: 0
[2025-07-22 16:40:26] 2025-07-22 23:40:06,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 16:40:26] 2025-07-22 23:40:26,522 | INFO     | PID=3516289 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 16:40:26] 2025-07-22 23:40:26,522 | INFO     | .. there are 28 such processes running
[2025-07-22 16:40:26] 2025-07-22 23:40:26,523 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 16:40:26] 2025-07-22 23:40:26,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 16:40:26] 2025-07-22 23:40:26,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 16:40:26] 2025-07-22 23:40:26,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 16:40:26] 2025-07-22 23:40:26,523 | INFO     | [monitor] control thread has ended
[2025-07-22 16:40:26] 2025-07-22 23:40:26,812 [wrapper] ==== pilot stdout END ====
[2025-07-22 16:40:26] 2025-07-22 23:40:26,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 16:40:26] 2025-07-22 23:40:26,815 [wrapper] pilotpid: 3516289
[2025-07-22 16:40:26] 2025-07-22 23:40:26,817 [wrapper] Pilot exit status: 0
[2025-07-22 16:40:26] 2025-07-22 23:40:26,825 [wrapper] pandaids: 6742555698
[2025-07-22 16:40:26] 2025-07-22 23:40:26,867 [wrapper] cleanup supervisor_pilot 3516295 3516290
[2025-07-22 16:40:26] 2025-07-22 23:40:26,870 [wrapper] Test setup, not cleaning
[2025-07-22 16:40:26] 2025-07-22 23:40:26,871 [wrapper] apfmon messages muted
[2025-07-22 16:40:26] 2025-07-22 23:40:26,873 [wrapper] ==== wrapper stdout END ====
[2025-07-22 16:40:26] 2025-07-22 23:40:26,876 [wrapper] ==== wrapper stderr END ====
[2025-07-22 16:40:26]  *** Error codes and diagnostics ***
[2025-07-22 16:40:26]     "exeErrorCode": 65,
[2025-07-22 16:40:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 16:40:26]     "pilotErrorCode": 1305,
[2025-07-22 16:40:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 16:40:26]  *** Listing of results directory ***
[2025-07-22 16:40:26] total 341964
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc    530466 Jul 22 12:19 pilot3.tar.gz
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc      5112 Jul 22 12:40 queuedata.json
[2025-07-22 16:40:26] -rwx------. 1 boinc boinc     36292 Jul 22 12:45 runpilot2-wrapper.sh
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc       100 Jul 22 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 16:40:26] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 16:35 run_atlas
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc       105 Jul 22 16:35 job.xml
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc      6596 Jul 22 16:35 init_data.xml
[2025-07-22 16:40:26] -rw-r--r--. 2 boinc boinc 346092333 Jul 22 16:35 EVNT.45697539._000109.pool.root.1
[2025-07-22 16:40:26] -rw-r--r--. 2 boinc boinc     15095 Jul 22 16:35 start_atlas.sh
[2025-07-22 16:40:26] drwxrwx--x. 2 boinc boinc      4096 Jul 22 16:35 shared
[2025-07-22 16:40:26] -rw-r--r--. 2 boinc boinc    542905 Jul 22 16:35 input.tar.gz
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc         0 Jul 22 16:35 boinc_lockfile
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc      2593 Jul 22 16:35 pandaJob.out
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc    977736 Jul 22 16:36 agis_schedconf.cvmfs.json
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc   1593031 Jul 22 16:36 agis_ddmendpoints.agis.ALL.json
[2025-07-22 16:40:26] drwx------. 4 boinc boinc      4096 Jul 22 16:36 pilot3
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc       954 Jul 22 16:37 memory_monitor_summary.json
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc     21372 Jul 22 16:37 log.45697541._003550.job.log.tgz.1
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc      8410 Jul 22 16:39 heartbeat.json
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc        22 Jul 22 16:40 wrapper_checkpoint.txt
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc      8192 Jul 22 16:40 boinc_mmap_file
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc       524 Jul 22 16:40 boinc_task_state.xml
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc       823 Jul 22 16:40 pilotlog.txt
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc        95 Jul 22 16:40 pilot_heartbeat.json
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc     78782 Jul 22 16:40 log.45697541._003550.job.log.1
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc       188 Jul 22 16:40 output.list
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc       620 Jul 22 16:40 runtime_log
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc    122880 Jul 22 16:40 result.tar.gz
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc      8485 Jul 22 16:40 runtime_log.err
[2025-07-22 16:40:26] -rw-------. 1 boinc boinc       643 Jul 22 16:40 BQYKDmH6Xy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ4JLDmfOOP8m.diag
[2025-07-22 16:40:26] -rw-r--r--. 1 boinc boinc     21815 Jul 22 16:40 stderr.txt
[2025-07-22 16:40:26] No HITS result produced
[2025-07-22 16:40:26]  *** Contents of shared directory: ***
[2025-07-22 16:40:27] total 338656
[2025-07-22 16:40:27] -rw-r--r--. 2 boinc boinc 346092333 Jul 22 16:35 ATLAS.root_0
[2025-07-22 16:40:27] -rw-r--r--. 2 boinc boinc     15095 Jul 22 16:35 start_atlas.sh
[2025-07-22 16:40:27] -rw-r--r--. 2 boinc boinc    542905 Jul 22 16:35 input.tar.gz
[2025-07-22 16:40:27] -rw-------. 1 boinc boinc    122880 Jul 22 16:40 result.tar.gz
16:40:28 (3512713): run_atlas exited; CPU time 24.280222
16:40:28 (3512713): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN