Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:05 (2326095): wrapper (7.7.26015): starting
16:06:05 (2326095): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 16:06:05] Arguments: --nthreads 12
[2025-07-22 16:06:05] Threads: 12
[2025-07-22 16:06:05] Checking for CVMFS
[2025-07-22 16:06:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 16:06:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 16:06:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 16:06:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 16:06:06] 2.11.5.0 6905 30579 221908 148637 3 232 27067708 45568000 13710 130560 0 244369064 99.748 187044458 29388 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-22 16:06:06] CVMFS is ok
[2025-07-22 16:06:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 16:06:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 16:06:06] Further information can be found at the LHC@home message board.
[2025-07-22 16:06:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 16:06:06] Checking for apptainer binary...
[2025-07-22 16:06:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 16:06:06] Running /usr/bin/apptainer --version
[2025-07-22 16:06:07] apptainer version 1.4.1-1.el9
[2025-07-22 16:06:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 16:06:07] wns0079.triumf.lcg
[2025-07-22 16:06:07] apptainer works
[2025-07-22 16:06:07] Set ATHENA_PROC_NUMBER=12
[2025-07-22 16:06:07] Set ATHENA_CORE_NUMBER=12
[2025-07-22 16:06:07] Starting ATLAS job with PandaID=6742555699
[2025-07-22 16:06:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 16:12:33]  *** The last 200 lines of the pilot log: ***
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | WARNING  | wrong length of table data, x=[1753225743.0], y=[765.0] (must be same and length>=4)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | could have reported an average CPU frequency of 2538 MHz (4 samples)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | ..............................
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . Timing measurements:
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . get job = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . initial setup = 11 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . payload setup = 38 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . stage-in = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . payload execution = 57 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . stage-out = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . log creation = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | ..............................
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555699/pilotlog.txt
[2025-07-22 16:12:34] 2025-07-22 23:11:58,613 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 16:12:34] - Log from pilotlog.txt -
[2025-07-22 16:12:34] 2025-07-22 23:11:58,600 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742555699/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | INFO     | extracted standard info from prmon json
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | WARNING  | wrong length of table data, x=[1753225743.0], y=[765.0] (must be same and length>=4)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | could have reported an average CPU frequency of 2538 MHz (4 samples)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | ..............................
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . Timing measurements:
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . get job = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . initial setup = 11 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . payload setup = 38 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . stage-in = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . payload execution = 57 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . stage-out = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . log creation = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | ..............................
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555699/pilotlog.txt
[2025-07-22 16:12:34] 2025-07-22 23:11:58,613 | WARNING  | 
[2025-07-22 16:12:34] [begin log extracts]
[2025-07-22 16:12:34] - Log from pilotlog.txt -
[2025-07-22 16:12:34] 2025-07-22 23:11:58,600 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742555699/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | INFO     | extracted standard info from prmon json
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:12:34] 2025-07-22 23:11:58,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | WARNING  | wrong length of table data, x=[1753225743.0], y=[765.0] (must be same and length>=4)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | could have reported an average CPU frequency of 2538 MHz (4 samples)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | ..............................
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . Timing measurements:
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . get job = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . initial setup = 11 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . payload setup = 38 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . stage-in = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . payload execution = 57 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . stage-out = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | . log creation = 0 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | ..............................
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:12:34] 2025-07-22 23:11:58,602 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555699/pilotlog.txt
[2025-07-22 16:12:34] [end log extracts]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,613 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,614 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 16:12:34] 2025-07-22 23:11:58,667 | INFO     | 
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | job summary report
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | --------------------------------------------------
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | PanDA job id: 6742555699
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | task id: 45697541
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 16:09:26,598 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | pilot state: failed 
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | transexitcode: 65
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | exeerrorcode: 65
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | exitcode: 65
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | nevents: 0
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | neventsw: 0
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | pid: 2336299
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | pgrp: 2336299
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | corecount: 12
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | event service: False
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | sizes: {0: 2397277, 1: 2397333, 2: 2397361, 3: 2397588, 4: 2397588, 15: 2397616, 26: 2397772, 33: 2398062, 37: 2398118, 100: 2421280, 101: 2425572, 102: 2425880, 2
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | --------------------------------------------------
[2025-07-22 16:12:34] 2025-07-22 23:11:58,668 | INFO     | 
[2025-07-22 16:12:34] 2025-07-22 23:11:58,669 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | job 6742555699 has completed (purged errors)
[2025-07-22 16:12:34] 2025-07-22 23:11:58,683 | INFO     | overall cleanup function is called
[2025-07-22 16:12:34] 2025-07-22 23:11:59,690 | INFO     | --- collectZombieJob: --- 10, [2336299]
[2025-07-22 16:12:34] 2025-07-22 23:11:59,690 | INFO     | zombie collector waiting for pid 2336299
[2025-07-22 16:12:34] 2025-07-22 23:11:59,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 16:12:34] 2025-07-22 23:11:59,690 | INFO     | collected zombie processes
[2025-07-22 16:12:34] 2025-07-22 23:11:59,690 | INFO     | will attempt to kill all subprocesses of pid=2336299
[2025-07-22 16:12:34] 2025-07-22 23:12:00,252 | INFO     | process IDs to be killed: [2336299] (in reverse order)
[2025-07-22 16:12:34] 2025-07-22 23:12:00,482 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 16:12:34] 2025-07-22 23:12:00,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 16:12:34] 2025-07-22 23:12:00,493 | INFO     | did not find any defunct processes belonging to 2336299
[2025-07-22 16:12:34] 2025-07-22 23:12:00,522 | INFO     | did not find any defunct processes belonging to 2336299
[2025-07-22 16:12:34] 2025-07-22 23:12:00,522 | INFO     | ready for new job
[2025-07-22 16:12:34] 2025-07-22 23:12:00,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 16:12:34] 2025-07-22 23:12:00,542 | INFO     | ***************************************
[2025-07-22 16:12:34] 2025-07-22 23:12:00,542 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 16:12:34] 2025-07-22 23:12:00,542 | INFO     | ***************************************
[2025-07-22 16:12:34] 2025-07-22 23:12:00,542 | INFO     | 
[2025-07-22 16:12:34] 2025-07-22 23:12:00,544 | INFO     | architecture information:
[2025-07-22 16:12:34] 2025-07-22 23:12:00,544 | INFO     | executing command: cat /etc/os-release
[2025-07-22 16:12:34] 2025-07-22 23:12:00,645 | INFO     | cat /etc/os-release:
[2025-07-22 16:12:34] NAME="CentOS Linux"
[2025-07-22 16:12:34] VERSION="7 (Core)"
[2025-07-22 16:12:34] ID="centos"
[2025-07-22 16:12:34] ID_LIKE="rhel fedora"
[2025-07-22 16:12:34] VERSION_ID="7"
[2025-07-22 16:12:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 16:12:34] ANSI_COLOR="0;31"
[2025-07-22 16:12:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 16:12:34] HOME_URL="https://www.centos.org/"
[2025-07-22 16:12:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 16:12:34] 
[2025-07-22 16:12:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 16:12:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 16:12:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 16:12:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 16:12:34] 
[2025-07-22 16:12:34] 2025-07-22 23:12:00,645 | INFO     | ***************************************
[2025-07-22 16:12:34] 2025-07-22 23:12:01,149 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 16:12:34] 2025-07-22 23:12:01,294 | INFO     | sufficient remaining disk space (2096709500928 B)
[2025-07-22 16:12:34] 2025-07-22 23:12:01,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 16:12:34] 2025-07-22 23:12:01,295 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 16:12:34] 2025-07-22 23:12:01,295 | INFO     | update_server=False
[2025-07-22 16:12:34] 2025-07-22 23:12:01,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 16:12:34] 2025-07-22 23:12:01,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 16:12:34] 2025-07-22 23:12:01,306 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 16:12:34] 2025-07-22 23:12:01,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 16:12:34] 2025-07-22 23:12:01,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 16:12:34] 2025-07-22 23:12:01,306 | INFO     | will abort loop
[2025-07-22 16:12:34] 2025-07-22 23:12:01,412 | INFO     | all data control threads have been joined
[2025-07-22 16:12:34] 2025-07-22 23:12:02,244 | INFO     | all payload control threads have been joined
[2025-07-22 16:12:34] 2025-07-22 23:12:02,301 | INFO     | [job] retrieve thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:02,312 | INFO     | [job] job monitor thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:02,418 | INFO     | [data] control thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:02,547 | INFO     | all job control threads have been joined
[2025-07-22 16:12:34] 2025-07-22 23:12:02,574 | INFO     | [payload] failed_post thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:02,728 | INFO     | [payload] validate_post thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,005 | INFO     | [data] copytool_in thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,189 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,189 | INFO     | [job] validate thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,250 | INFO     | [payload] control thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,312 | INFO     | [data] copytool_out thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,373 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,553 | INFO     | [job] control thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,560 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:03,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 16:12:34] 2025-07-22 23:12:04,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 16:12:34] 2025-07-22 23:12:04,690 | INFO     | [job] queue monitor thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:08,273 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 16:12:34] 2025-07-22 23:12:08,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494485706560)>', '<ExcThread(monitor, started 140493807675136)>']
[2025-07-22 16:12:34] 2025-07-22 23:12:13,887 | INFO     | all workflow threads have been joined
[2025-07-22 16:12:34] 2025-07-22 23:12:13,887 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 16:12:34] 2025-07-22 23:12:13,887 | INFO     | traces error code: 0
[2025-07-22 16:12:34] 2025-07-22 23:12:13,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 16:12:34] 2025-07-22 23:12:31,830 | INFO     | PID=2329683 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 16:12:34] 2025-07-22 23:12:31,830 | INFO     | .. there are 28 such processes running
[2025-07-22 16:12:34] 2025-07-22 23:12:31,830 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 16:12:34] 2025-07-22 23:12:31,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 16:12:34] 2025-07-22 23:12:31,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 16:12:34] 2025-07-22 23:12:31,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 16:12:34] 2025-07-22 23:12:31,831 | CRITICAL | thread 'MainThread' is not alive
[2025-07-22 16:12:34] 2025-07-22 23:12:31,831 | INFO     | [monitor] control thread has ended
[2025-07-22 16:12:34] 2025-07-22 23:12:32,421 [wrapper] ==== pilot stdout END ====
[2025-07-22 16:12:34] 2025-07-22 23:12:32,436 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 16:12:34] 2025-07-22 23:12:32,525 [wrapper] pilotpid: 2329683
[2025-07-22 16:12:34] 2025-07-22 23:12:32,541 [wrapper] Pilot exit status: 0
[2025-07-22 16:12:34] 2025-07-22 23:12:32,624 [wrapper] pandaids: 6742555699
[2025-07-22 16:12:34] 2025-07-22 23:12:32,959 [wrapper] cleanup supervisor_pilot 2329689 2329684
[2025-07-22 16:12:34] 2025-07-22 23:12:32,988 [wrapper] Test setup, not cleaning
[2025-07-22 16:12:34] 2025-07-22 23:12:33,002 [wrapper] apfmon messages muted
[2025-07-22 16:12:34] 2025-07-22 23:12:33,057 [wrapper] ==== wrapper stdout END ====
[2025-07-22 16:12:34] 2025-07-22 23:12:33,089 [wrapper] ==== wrapper stderr END ====
[2025-07-22 16:12:34]  *** Error codes and diagnostics ***
[2025-07-22 16:12:34]     "exeErrorCode": 65,
[2025-07-22 16:12:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 16:12:34]     "pilotErrorCode": 1305,
[2025-07-22 16:12:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 16:12:34]  *** Listing of results directory ***
[2025-07-22 16:12:34] total 341968
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc    530466 Jul 22 12:19 pilot3.tar.gz
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc      5112 Jul 22 12:40 queuedata.json
[2025-07-22 16:12:34] -rwx------. 1 boinc boinc     36292 Jul 22 12:45 runpilot2-wrapper.sh
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc       100 Jul 22 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 16:12:34] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 16:06 run_atlas
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc       105 Jul 22 16:06 job.xml
[2025-07-22 16:12:34] -rw-r--r--. 2 boinc boinc 346092333 Jul 22 16:06 EVNT.45697539._000109.pool.root.1
[2025-07-22 16:12:34] -rw-r--r--. 2 boinc boinc     15095 Jul 22 16:06 start_atlas.sh
[2025-07-22 16:12:34] drwxrwx--x. 2 boinc boinc      4096 Jul 22 16:06 shared
[2025-07-22 16:12:34] -rw-r--r--. 2 boinc boinc    542904 Jul 22 16:06 input.tar.gz
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc      6596 Jul 22 16:06 init_data.xml
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc         0 Jul 22 16:06 boinc_lockfile
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc      2593 Jul 22 16:06 pandaJob.out
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc    977736 Jul 22 16:06 agis_schedconf.cvmfs.json
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc   1593031 Jul 22 16:06 agis_ddmendpoints.agis.ALL.json
[2025-07-22 16:12:34] drwx------. 4 boinc boinc      4096 Jul 22 16:07 pilot3
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc       524 Jul 22 16:09 boinc_task_state.xml
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc       959 Jul 22 16:09 memory_monitor_summary.json
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc     21837 Jul 22 16:09 log.45697541._003551.job.log.tgz.1
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc        95 Jul 22 16:11 pilot_heartbeat.json
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc      8385 Jul 22 16:11 heartbeat.json
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc      8192 Jul 22 16:12 boinc_mmap_file
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc       893 Jul 22 16:12 pilotlog.txt
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc        22 Jul 22 16:12 wrapper_checkpoint.txt
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc     83213 Jul 22 16:12 log.45697541._003551.job.log.1
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc       188 Jul 22 16:12 output.list
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc       620 Jul 22 16:12 runtime_log
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc    122880 Jul 22 16:12 result.tar.gz
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc      8485 Jul 22 16:12 runtime_log.err
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc       645 Jul 22 16:12 LcZKDmH6Xy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK4JLDmlWMAsn.diag
[2025-07-22 16:12:34] -rw-r--r--. 1 boinc boinc     21871 Jul 22 16:12 stderr.txt
[2025-07-22 16:12:34] No HITS result produced
[2025-07-22 16:12:34]  *** Contents of shared directory: ***
[2025-07-22 16:12:34] total 338656
[2025-07-22 16:12:34] -rw-r--r--. 2 boinc boinc 346092333 Jul 22 16:06 ATLAS.root_0
[2025-07-22 16:12:34] -rw-r--r--. 2 boinc boinc     15095 Jul 22 16:06 start_atlas.sh
[2025-07-22 16:12:34] -rw-r--r--. 2 boinc boinc    542904 Jul 22 16:06 input.tar.gz
[2025-07-22 16:12:34] -rw-------. 1 boinc boinc    122880 Jul 22 16:12 result.tar.gz
16:12:36 (2326095): run_atlas exited; CPU time 30.285184
16:12:36 (2326095): called boinc_finish(0)

</stderr_txt>
]]>

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