Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:02 (2307091): wrapper (7.7.26015): starting
15:59:02 (2307091): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 15:59:02] Arguments: --nthreads 12
[2025-07-22 15:59:02] Threads: 12
[2025-07-22 15:59:02] Checking for CVMFS
[2025-07-22 15:59:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 15:59:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 15:59:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 15:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 15:59:03] 2.11.5.0 6905 30572 221624 148637 2 67 27062625 45568001 13710 130560 0 244320653 99.748 187044453 29388 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-22 15:59:03] CVMFS is ok
[2025-07-22 15:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 15:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 15:59:03] Further information can be found at the LHC@home message board.
[2025-07-22 15:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 15:59:03] Checking for apptainer binary...
[2025-07-22 15:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 15:59:03] Running /usr/bin/apptainer --version
[2025-07-22 15:59:03] apptainer version 1.4.1-1.el9
[2025-07-22 15:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 15:59:03] wns0079.triumf.lcg
[2025-07-22 15:59:03] apptainer works
[2025-07-22 15:59:03] Set ATHENA_PROC_NUMBER=12
[2025-07-22 15:59:03] Set ATHENA_CORE_NUMBER=12
[2025-07-22 15:59:03] Starting ATLAS job with PandaID=6742555578
[2025-07-22 15:59:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 16:06:00]  *** The last 200 lines of the pilot log: ***
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | WARNING  | wrong length of table data, x=[1753225329.0, 1753225390.0], y=[1484.0, 1054.0] (must be same and length>=4)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | could have reported an average CPU frequency of 2473 MHz (4 samples)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | ..............................
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . Timing measurements:
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . get job = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . initial setup = 10 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . payload setup = 39 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . stage-in = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . payload execution = 93 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . stage-out = 1 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . log creation = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | ..............................
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555578/pilotlog.txt
[2025-07-22 16:06:00] 2025-07-22 23:05:23,340 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 16:06:00] - Log from pilotlog.txt -
[2025-07-22 16:06:00] 2025-07-22 23:05:23,327 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742555578/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | INFO     | extracted standard info from prmon json
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | WARNING  | wrong length of table data, x=[1753225329.0, 1753225390.0], y=[1484.0, 1054.0] (must be same and length>=4)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | could have reported an average CPU frequency of 2473 MHz (4 samples)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | ..............................
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . Timing measurements:
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . get job = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . initial setup = 10 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . payload setup = 39 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . stage-in = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . payload execution = 93 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . stage-out = 1 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . log creation = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | ..............................
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555578/pilotlog.txt
[2025-07-22 16:06:00] 2025-07-22 23:05:23,340 | WARNING  | 
[2025-07-22 16:06:00] [begin log extracts]
[2025-07-22 16:06:00] - Log from pilotlog.txt -
[2025-07-22 16:06:00] 2025-07-22 23:05:23,327 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742555578/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | INFO     | extracted standard info from prmon json
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 16:06:00] 2025-07-22 23:05:23,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | WARNING  | wrong length of table data, x=[1753225329.0, 1753225390.0], y=[1484.0, 1054.0] (must be same and length>=4)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | could have reported an average CPU frequency of 2473 MHz (4 samples)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | ..............................
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . Timing measurements:
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . get job = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . initial setup = 10 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . payload setup = 39 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . stage-in = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . payload execution = 93 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . stage-out = 1 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | . log creation = 0 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | ..............................
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 16:06:00] 2025-07-22 23:05:23,329 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742555578/pilotlog.txt
[2025-07-22 16:06:00] [end log extracts]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,341 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,341 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | 
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | job summary report
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | --------------------------------------------------
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | PanDA job id: 6742555578
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | task id: 45697541
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 16:03:02,889 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | pilot state: failed 
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | transexitcode: 65
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | exeerrorcode: 65
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | exitcode: 65
[2025-07-22 16:06:00] 2025-07-22 23:05:23,397 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | nevents: 0
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | neventsw: 0
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | pid: 2317578
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | pgrp: 2317578
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | corecount: 12
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | event service: False
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | sizes: {0: 2397334, 1: 2397334, 2: 2397561, 13: 2397561, 24: 2397617, 27: 2397907, 35: 2398063, 138: 2421331, 140: 2425623, 142: 2425651, 267: 2425817}
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | --------------------------------------------------
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | 
[2025-07-22 16:06:00] 2025-07-22 23:05:23,398 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | job 6742555578 has completed (purged errors)
[2025-07-22 16:06:00] 2025-07-22 23:05:23,432 | INFO     | overall cleanup function is called
[2025-07-22 16:06:00] 2025-07-22 23:05:24,439 | INFO     | --- collectZombieJob: --- 10, [2317578]
[2025-07-22 16:06:00] 2025-07-22 23:05:24,439 | INFO     | zombie collector waiting for pid 2317578
[2025-07-22 16:06:00] 2025-07-22 23:05:24,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 16:06:00] 2025-07-22 23:05:24,439 | INFO     | collected zombie processes
[2025-07-22 16:06:00] 2025-07-22 23:05:24,439 | INFO     | will attempt to kill all subprocesses of pid=2317578
[2025-07-22 16:06:00] 2025-07-22 23:05:26,361 | INFO     | process IDs to be killed: [2317578] (in reverse order)
[2025-07-22 16:06:00] 2025-07-22 23:05:27,078 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 16:06:00] 2025-07-22 23:05:27,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 16:06:00] 2025-07-22 23:05:27,109 | INFO     | did not find any defunct processes belonging to 2317578
[2025-07-22 16:06:00] 2025-07-22 23:05:27,199 | INFO     | did not find any defunct processes belonging to 2317578
[2025-07-22 16:06:00] 2025-07-22 23:05:27,200 | INFO     | ready for new job
[2025-07-22 16:06:00] 2025-07-22 23:05:27,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 16:06:00] 2025-07-22 23:05:27,201 | INFO     | ***************************************
[2025-07-22 16:06:00] 2025-07-22 23:05:27,201 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 16:06:00] 2025-07-22 23:05:27,201 | INFO     | ***************************************
[2025-07-22 16:06:00] 2025-07-22 23:05:27,201 | INFO     | 
[2025-07-22 16:06:00] 2025-07-22 23:05:27,246 | INFO     | architecture information:
[2025-07-22 16:06:00] 2025-07-22 23:05:27,257 | INFO     | executing command: cat /etc/os-release
[2025-07-22 16:06:00] 2025-07-22 23:05:27,320 | INFO     | cat /etc/os-release:
[2025-07-22 16:06:00] NAME="CentOS Linux"
[2025-07-22 16:06:00] VERSION="7 (Core)"
[2025-07-22 16:06:00] ID="centos"
[2025-07-22 16:06:00] ID_LIKE="rhel fedora"
[2025-07-22 16:06:00] VERSION_ID="7"
[2025-07-22 16:06:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 16:06:00] ANSI_COLOR="0;31"
[2025-07-22 16:06:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 16:06:00] HOME_URL="https://www.centos.org/"
[2025-07-22 16:06:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 16:06:00] 
[2025-07-22 16:06:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 16:06:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 16:06:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 16:06:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 16:06:00] 
[2025-07-22 16:06:00] 2025-07-22 23:05:27,320 | INFO     | ***************************************
[2025-07-22 16:06:00] 2025-07-22 23:05:27,824 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 16:06:00] 2025-07-22 23:05:27,887 | INFO     | sufficient remaining disk space (2098687115264 B)
[2025-07-22 16:06:00] 2025-07-22 23:05:27,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 16:06:00] 2025-07-22 23:05:27,888 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 16:06:00] 2025-07-22 23:05:27,888 | INFO     | update_server=False
[2025-07-22 16:06:00] 2025-07-22 23:05:27,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 16:06:00] 2025-07-22 23:05:27,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 16:06:00] 2025-07-22 23:05:27,888 | INFO     | aborting loop
[2025-07-22 16:06:00] 2025-07-22 23:05:27,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 16:06:00] 2025-07-22 23:05:28,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 16:06:00] 2025-07-22 23:05:28,894 | INFO     | [job] job monitor thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:28,894 | INFO     | [job] retrieve thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:28,902 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:28,926 | INFO     | all data control threads have been joined
[2025-07-22 16:06:00] 2025-07-22 23:05:29,026 | INFO     | [payload] validate_post thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,110 | INFO     | all payload control threads have been joined
[2025-07-22 16:06:00] 2025-07-22 23:05:29,115 | INFO     | [job] validate thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,124 | INFO     | all job control threads have been joined
[2025-07-22 16:06:00] 2025-07-22 23:05:29,235 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,235 | INFO     | [data] copytool_in thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,408 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,464 | INFO     | [job] queue monitor thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,895 | INFO     | [data] copytool_out thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,928 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:29,932 | INFO     | [data] control thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:30,116 | INFO     | [payload] control thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:30,130 | INFO     | [job] control thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:30,368 | INFO     | [payload] failed_post thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:30,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 16:06:00] 2025-07-22 23:05:34,718 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 16:06:00] 2025-07-22 23:05:36,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496443766592)>', '<ExcThread(monitor, started 140495762224896)>']
[2025-07-22 16:06:00] 2025-07-22 23:05:41,198 | INFO     | all workflow threads have been joined
[2025-07-22 16:06:00] 2025-07-22 23:05:41,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 16:06:00] 2025-07-22 23:05:41,198 | INFO     | traces error code: 0
[2025-07-22 16:06:00] 2025-07-22 23:05:41,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | INFO     | PID=2310983 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | INFO     | .. there are 28 such processes running
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 16:06:00] 2025-07-22 23:05:58,260 | INFO     | [monitor] control thread has ended
[2025-07-22 16:06:00] 2025-07-22 23:05:59,310 [wrapper] ==== pilot stdout END ====
[2025-07-22 16:06:00] 2025-07-22 23:05:59,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 16:06:00] 2025-07-22 23:05:59,416 [wrapper] pilotpid: 2310983
[2025-07-22 16:06:00] 2025-07-22 23:05:59,461 [wrapper] Pilot exit status: 0
[2025-07-22 16:06:00] 2025-07-22 23:05:59,587 [wrapper] pandaids: 6742555578
[2025-07-22 16:06:00] 2025-07-22 23:05:59,855 [wrapper] cleanup supervisor_pilot 2310989 2310984
[2025-07-22 16:06:00] 2025-07-22 23:05:59,891 [wrapper] Test setup, not cleaning
[2025-07-22 16:06:00] 2025-07-22 23:05:59,912 [wrapper] apfmon messages muted
[2025-07-22 16:06:00] 2025-07-22 23:05:59,950 [wrapper] ==== wrapper stdout END ====
[2025-07-22 16:06:00] 2025-07-22 23:05:59,992 [wrapper] ==== wrapper stderr END ====
[2025-07-22 16:06:00]  *** Error codes and diagnostics ***
[2025-07-22 16:06:00]     "exeErrorCode": 65,
[2025-07-22 16:06:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 16:06:00]     "pilotErrorCode": 1305,
[2025-07-22 16:06:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 16:06:00]  *** Listing of results directory ***
[2025-07-22 16:06:00] total 336080
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc    530466 Jul 22 12:19 pilot3.tar.gz
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc      5112 Jul 22 12:35 queuedata.json
[2025-07-22 16:06:00] -rwx------. 1 boinc boinc     36292 Jul 22 12:40 runpilot2-wrapper.sh
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc       100 Jul 22 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 16:06:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 15:59 run_atlas
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc       105 Jul 22 15:59 job.xml
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc      6596 Jul 22 15:59 init_data.xml
[2025-07-22 16:06:00] -rw-r--r--. 2 boinc boinc 340068197 Jul 22 15:59 EVNT.45697539._000104.pool.root.1
[2025-07-22 16:06:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 15:59 start_atlas.sh
[2025-07-22 16:06:00] drwxrwx--x. 2 boinc boinc      4096 Jul 22 15:59 shared
[2025-07-22 16:06:00] -rw-r--r--. 2 boinc boinc    542896 Jul 22 15:59 input.tar.gz
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc         0 Jul 22 15:59 boinc_lockfile
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc      2594 Jul 22 15:59 pandaJob.out
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc    977736 Jul 22 16:00 agis_schedconf.cvmfs.json
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc   1593031 Jul 22 16:00 agis_ddmendpoints.agis.ALL.json
[2025-07-22 16:06:00] drwx------. 4 boinc boinc      4096 Jul 22 16:00 pilot3
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc       525 Jul 22 16:03 boinc_task_state.xml
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc       974 Jul 22 16:03 memory_monitor_summary.json
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc     21993 Jul 22 16:03 log.45697541._003430.job.log.tgz.1
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc        95 Jul 22 16:05 pilot_heartbeat.json
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc      8397 Jul 22 16:05 heartbeat.json
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc        23 Jul 22 16:05 wrapper_checkpoint.txt
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc       823 Jul 22 16:05 pilotlog.txt
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc     82547 Jul 22 16:05 log.45697541._003430.job.log.1
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc       188 Jul 22 16:06 output.list
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc       620 Jul 22 16:06 runtime_log
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc    122880 Jul 22 16:06 result.tar.gz
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc      8485 Jul 22 16:06 runtime_log.err
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc       647 Jul 22 16:06 aM1LDma1Xy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb3JLDmqEcZHo.diag
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc      8192 Jul 22 16:06 boinc_mmap_file
[2025-07-22 16:06:00] -rw-r--r--. 1 boinc boinc     21913 Jul 22 16:06 stderr.txt
[2025-07-22 16:06:00] No HITS result produced
[2025-07-22 16:06:00]  *** Contents of shared directory: ***
[2025-07-22 16:06:00] total 332768
[2025-07-22 16:06:00] -rw-r--r--. 2 boinc boinc 340068197 Jul 22 15:59 ATLAS.root_0
[2025-07-22 16:06:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 15:59 start_atlas.sh
[2025-07-22 16:06:00] -rw-r--r--. 2 boinc boinc    542896 Jul 22 15:59 input.tar.gz
[2025-07-22 16:06:00] -rw-------. 1 boinc boinc    122880 Jul 22 16:06 result.tar.gz
16:06:01 (2307091): run_atlas exited; CPU time 30.572624
16:06:01 (2307091): called boinc_finish(0)

</stderr_txt>
]]>

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