Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:21:55 (2227135): wrapper (7.7.26015): starting
06:21:55 (2227135): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 06:21:55] Arguments: --nthreads 12
[2025-07-23 06:21:55] Threads: 12
[2025-07-23 06:21:55] Checking for CVMFS
[2025-07-23 06:21:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 06:21:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 06:21:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 06:21:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 06:21:55] 2.13.1.0 8995 26619 244748 148646 2 196 36330519 46080001 7499 130560 0 242999592 99.904 62343359 23747 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 06:21:55] CVMFS is ok
[2025-07-23 06:21:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 06:21:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 06:21:55] Further information can be found at the LHC@home message board.
[2025-07-23 06:21:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 06:21:55] Checking for apptainer binary...
[2025-07-23 06:21:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 06:21:55] Running /usr/bin/apptainer --version
[2025-07-23 06:21:56] apptainer version 1.4.1-1.el9
[2025-07-23 06:21:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 06:21:56] mff2103.farm.particle.cz
[2025-07-23 06:21:56] apptainer works
[2025-07-23 06:21:56] Set ATHENA_PROC_NUMBER=12
[2025-07-23 06:21:56] Set ATHENA_CORE_NUMBER=12
[2025-07-23 06:21:56] Starting ATLAS job with PandaID=6742271359
[2025-07-23 06:21:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 07:46:33]  *** The last 200 lines of the pilot log: ***
[2025-07-23 07:46:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 07:46:33]  replicas=None
[2025-07-23 07:46:33]  scope=mc23_13p6TeV
[2025-07-23 07:46:33]  status=None
[2025-07-23 07:46:33]  status_code=0
[2025-07-23 07:46:33]  storage_token=
[2025-07-23 07:46:33]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-6742271359/log.45697532._005141.job.log.tgz.1
[2025-07-23 07:46:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/50/log.45697532._005141.job.log.tgz.1
[2025-07-23 07:46:33]  workdir=None
[2025-07-23 07:46:33] ]
[2025-07-23 07:46:33] 2025-07-23 05:45:50,276 | INFO     | transferring file log.45697532._005141.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-6742271359/log.45697532._005141.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 07:46:33] 2025-07-23 05:45:50,277 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-6742271359/log.45697532._005141.job.log.tgz.1 /scratch/.boinc/slots/5/log.45697532._005141.j
[2025-07-23 07:46:33] 2025-07-23 05:45:50,302 | INFO     | adding to output.list: log.45697532._005141.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/50/log.45697532._005141.job.log.tg
[2025-07-23 07:46:33] 2025-07-23 05:45:50,303 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 07:46:33] 2025-07-23 05:45:50,303 | INFO     | summary of transferred files:
[2025-07-23 07:46:33] 2025-07-23 05:45:50,303 | INFO     |  -- lfn=log.45697532._005141.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 07:46:33] 2025-07-23 05:45:50,303 | INFO     | stage-out finished correctly
[2025-07-23 07:46:33] 2025-07-23 05:45:51,623 | INFO     | monitor loop #357: job 0:6742271359 is in state 'finished'
[2025-07-23 07:46:33] 2025-07-23 05:45:51,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 07:46:33] 2025-07-23 05:45:53,317 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 07:46:33] 2025-07-23 05:45:54,127 | INFO     | monitor loop #358: job 0:6742271359 is in state 'finished'
[2025-07-23 07:46:33] 2025-07-23 05:45:54,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 07:46:33] 2025-07-23 05:45:54,329 | INFO     | PID=2231138 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 07:46:33] 2025-07-23 05:45:54,329 | INFO     | .. there are 10 such processes running
[2025-07-23 07:46:33] 2025-07-23 05:45:55,473 | INFO     | job 6742271359 has state=finished
[2025-07-23 07:46:33] 2025-07-23 05:45:55,474 | INFO     | preparing for final server update for job 6742271359 in state='finished'
[2025-07-23 07:46:33] 2025-07-23 05:45:55,474 | INFO     | this job has now completed (state=finished)
[2025-07-23 07:46:33] 2025-07-23 05:45:55,474 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 07:46:33] 2025-07-23 05:45:55,474 | INFO     | log transfer has been attempted: DONE
[2025-07-23 07:46:33] 2025-07-23 05:45:55,474 | INFO     | job 6742271359 has finished - writing final server update
[2025-07-23 07:46:33] 2025-07-23 05:45:55,475 | INFO     | total number of processed events: 400 (read)
[2025-07-23 07:46:33] 2025-07-23 05:45:55,475 | INFO     | executing command: lscpu
[2025-07-23 07:46:33] 2025-07-23 05:45:55,555 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 07:46:33] 2025-07-23 05:45:56,630 | INFO     | monitor loop #359: job 0:6742271359 is in state 'finished'
[2025-07-23 07:46:33] 2025-07-23 05:45:56,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 07:46:33] 2025-07-23 05:45:59,133 | INFO     | monitor loop #360: job 0:6742271359 is in state 'finished'
[2025-07-23 07:46:33] 2025-07-23 05:45:59,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,353 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 07:46:33] 2025-07-23 05:46:00,367 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2763.655302083332
[2025-07-23 07:46:33] 2025-07-23 05:46:00,385 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6742271359/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,386 | INFO     | extracted standard info from prmon json
[2025-07-23 07:46:33] 2025-07-23 05:46:00,386 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 07:46:33] 2025-07-23 05:46:00,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 07:46:33] 2025-07-23 05:46:00,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 07:46:33] 2025-07-23 05:46:00,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 07:46:33] 2025-07-23 05:46:00,388 | INFO     | fitting pss+swap vs Time
[2025-07-23 07:46:33] 2025-07-23 05:46:00,389 | INFO     | sum of square deviations: 130793150.0
[2025-07-23 07:46:33] 2025-07-23 05:46:00,389 | INFO     | sum of deviations: -3783644377.000003
[2025-07-23 07:46:33] 2025-07-23 05:46:00,389 | INFO     | mean x: 1753247120.0
[2025-07-23 07:46:33] 2025-07-23 05:46:00,389 | INFO     | mean y: 2826335.1066666665
[2025-07-23 07:46:33] 2025-07-23 05:46:00,389 | INFO     | -- intersect: 50721565099.938385
[2025-07-23 07:46:33] 2025-07-23 05:46:00,389 | INFO     | intersect: 50721565099.938385
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | chi2: 0.05003729801598049
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | -- intersect: 50721565099.938385
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | current memory leak: -28.93 B/s (using 75 data points, chi2=0.05)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | could have reported an average CPU frequency of 2752 MHz (6 samples)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | ..............................
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | . Timing measurements:
[2025-07-23 07:46:33] 2025-07-23 05:46:00,390 | INFO     | . get job = 0 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | . initial setup = 1 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | . payload setup = 8 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | . stage-in = 0 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | . payload execution = 4992 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | . stage-out = 0 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | . log creation = 0 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,391 | INFO     | ..............................
[2025-07-23 07:46:33] 2025-07-23 05:46:00,487 | INFO     | 
[2025-07-23 07:46:33] 2025-07-23 05:46:00,487 | INFO     | job summary report
[2025-07-23 07:46:33] 2025-07-23 05:46:00,487 | INFO     | --------------------------------------------------
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | PanDA job id: 6742271359
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | task id: 45697532
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | errors: (none)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | pilot state: finished 
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | transexitcode: 0
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | exeerrorcode: 0
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | exeerrordiag: 
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | exitcode: 0
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | exitmsg: OK
[2025-07-23 07:46:33] 2025-07-23 05:46:00,488 | INFO     | cpuconsumptiontime: 53394 s
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | nevents: 400
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | neventsw: 0
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | pid: 2238233
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | pgrp: 2238233
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | corecount: 12
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | event service: False
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | sizes: {0: 2397366, 1: 2397565, 6: 2397827, 11: 2397855, 5005: 2424118, 5007: 2433118, 5010: 2433302, 5017: 2433496}
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | --------------------------------------------------
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | 
[2025-07-23 07:46:33] 2025-07-23 05:46:00,489 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-07-23 07:46:33] 2025-07-23 05:46:00,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 07:46:33] 2025-07-23 05:46:00,520 | INFO     | job 6742271359 has completed (purged errors)
[2025-07-23 07:46:33] 2025-07-23 05:46:00,520 | INFO     | overall cleanup function is called
[2025-07-23 07:46:33] 2025-07-23 05:46:01,530 | INFO     | --- collectZombieJob: --- 10, [2238233]
[2025-07-23 07:46:33] 2025-07-23 05:46:01,530 | INFO     | zombie collector waiting for pid 2238233
[2025-07-23 07:46:33] 2025-07-23 05:46:01,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 07:46:33] 2025-07-23 05:46:01,530 | INFO     | collected zombie processes
[2025-07-23 07:46:33] 2025-07-23 05:46:01,531 | INFO     | will attempt to kill all subprocesses of pid=2238233
[2025-07-23 07:46:33] 2025-07-23 05:46:01,898 | INFO     | process IDs to be killed: [2238233] (in reverse order)
[2025-07-23 07:46:33] 2025-07-23 05:46:02,020 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 07:46:33] 2025-07-23 05:46:02,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 07:46:33] 2025-07-23 05:46:02,033 | INFO     | did not find any defunct processes belonging to 2238233
[2025-07-23 07:46:33] 2025-07-23 05:46:02,042 | INFO     | did not find any defunct processes belonging to 2238233
[2025-07-23 07:46:33] 2025-07-23 05:46:02,043 | INFO     | ready for new job
[2025-07-23 07:46:33] 2025-07-23 05:46:02,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 07:46:33] 2025-07-23 05:46:02,044 | INFO     | ***************************************
[2025-07-23 07:46:33] 2025-07-23 05:46:02,045 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 07:46:33] 2025-07-23 05:46:02,045 | INFO     | ***************************************
[2025-07-23 07:46:33] 2025-07-23 05:46:02,045 | INFO     | 
[2025-07-23 07:46:33] 2025-07-23 05:46:02,051 | INFO     | architecture information:
[2025-07-23 07:46:33] 2025-07-23 05:46:02,051 | INFO     | executing command: cat /etc/os-release
[2025-07-23 07:46:33] 2025-07-23 05:46:02,075 | INFO     | cat /etc/os-release:
[2025-07-23 07:46:33] NAME="CentOS Linux"
[2025-07-23 07:46:33] VERSION="7 (Core)"
[2025-07-23 07:46:33] ID="centos"
[2025-07-23 07:46:33] ID_LIKE="rhel fedora"
[2025-07-23 07:46:33] VERSION_ID="7"
[2025-07-23 07:46:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 07:46:33] ANSI_COLOR="0;31"
[2025-07-23 07:46:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 07:46:33] HOME_URL="https://www.centos.org/"
[2025-07-23 07:46:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 07:46:33] 
[2025-07-23 07:46:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 07:46:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 07:46:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 07:46:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 07:46:33] 
[2025-07-23 07:46:33] 2025-07-23 05:46:02,075 | INFO     | ***************************************
[2025-07-23 07:46:33] 2025-07-23 05:46:02,579 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-07-23 07:46:33] 2025-07-23 05:46:02,602 | INFO     | sufficient remaining disk space (1675060314112 B)
[2025-07-23 07:46:33] 2025-07-23 05:46:02,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 07:46:33] 2025-07-23 05:46:02,602 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 07:46:33] 2025-07-23 05:46:02,602 | INFO     | update_server=False
[2025-07-23 07:46:33] 2025-07-23 05:46:02,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 07:46:33] 2025-07-23 05:46:02,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 07:46:33] 2025-07-23 05:46:02,643 | INFO     | aborting loop
[2025-07-23 07:46:33] 2025-07-23 05:46:03,020 | INFO     | all job control threads have been joined
[2025-07-23 07:46:33] 2025-07-23 05:46:03,218 | INFO     | all payload control threads have been joined
[2025-07-23 07:46:33] 2025-07-23 05:46:03,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 07:46:33] 2025-07-23 05:46:03,593 | INFO     | all data control threads have been joined
[2025-07-23 07:46:33] 2025-07-23 05:46:03,607 | INFO     | [job] retrieve thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:03,648 | INFO     | [job] job monitor thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:03,696 | INFO     | [data] copytool_in thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:03,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 07:46:33] 2025-07-23 05:46:03,925 | INFO     | [job] validate thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,014 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,026 | INFO     | [job] control thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,224 | INFO     | [payload] control thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,329 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,433 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,458 | INFO     | [payload] failed_post thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,599 | INFO     | [data] control thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:04,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:05,131 | INFO     | [payload] validate_post thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:05,428 | INFO     | [data] copytool_out thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:05,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 07:46:33] 2025-07-23 05:46:06,502 | INFO     | [job] queue monitor thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:07,926 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 07:46:33] 2025-07-23 05:46:09,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607467325248)>', '<ExcThread(monitor, started 140607112582912)>']
[2025-07-23 07:46:33] 2025-07-23 05:46:14,954 | INFO     | all workflow threads have been joined
[2025-07-23 07:46:33] 2025-07-23 05:46:14,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 07:46:33] 2025-07-23 05:46:14,955 | INFO     | traces error code: 0
[2025-07-23 07:46:33] 2025-07-23 05:46:14,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 07:46:33] 2025-07-23 05:46:32,853 | INFO     | PID=2231138 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 07:46:33] 2025-07-23 05:46:32,853 | INFO     | .. there are 10 such processes running
[2025-07-23 07:46:33] 2025-07-23 05:46:32,854 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 07:46:33] 2025-07-23 05:46:32,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 07:46:33] 2025-07-23 05:46:32,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 07:46:33] 2025-07-23 05:46:32,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 07:46:33] 2025-07-23 05:46:32,854 | INFO     | [monitor] control thread has ended
[2025-07-23 07:46:33] 2025-07-23 05:46:33,024 [wrapper] ==== pilot stdout END ====
[2025-07-23 07:46:33] 2025-07-23 05:46:33,028 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 07:46:33] 2025-07-23 05:46:33,032 [wrapper] pilotpid: 2231138
[2025-07-23 07:46:33] 2025-07-23 05:46:33,035 [wrapper] Pilot exit status: 0
[2025-07-23 07:46:33] 2025-07-23 05:46:33,049 [wrapper] pandaids: 6742271359
[2025-07-23 07:46:33] 2025-07-23 05:46:33,130 [wrapper] cleanup supervisor_pilot 2410269 2231139
[2025-07-23 07:46:33] 2025-07-23 05:46:33,135 [wrapper] Test setup, not cleaning
[2025-07-23 07:46:33] 2025-07-23 05:46:33,138 [wrapper] apfmon messages muted
[2025-07-23 07:46:33] 2025-07-23 05:46:33,141 [wrapper] ==== wrapper stdout END ====
[2025-07-23 07:46:33] 2025-07-23 05:46:33,145 [wrapper] ==== wrapper stderr END ====
[2025-07-23 07:46:33]  *** Error codes and diagnostics ***
[2025-07-23 07:46:33]     "exeErrorCode": 0,
[2025-07-23 07:46:33]     "exeErrorDiag": "",
[2025-07-23 07:46:33]     "pilotErrorCode": 0,
[2025-07-23 07:46:33]     "pilotErrorDiag": "",
[2025-07-23 07:46:33]  *** Listing of results directory ***
[2025-07-23 07:46:33] total 599400
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc    530466 Jul 22 13:14 pilot3.tar.gz
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc      5112 Jul 22 14:00 queuedata.json
[2025-07-23 07:46:33] -rwx------ 1 boinc boinc     36292 Jul 22 14:04 runpilot2-wrapper.sh
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc       100 Jul 23 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 07:46:33] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 06:21 run_atlas
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc       105 Jul 23 06:21 job.xml
[2025-07-23 07:46:33] -rw-r--r-- 2 boinc boinc 333721542 Jul 23 06:21 EVNT.45697530._000203.pool.root.1
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc      6664 Jul 23 06:21 init_data.xml
[2025-07-23 07:46:33] drwxrwx--x 2 boinc boinc      4096 Jul 23 06:21 shared
[2025-07-23 07:46:33] -rw-r--r-- 2 boinc boinc    542904 Jul 23 06:21 input.tar.gz
[2025-07-23 07:46:33] -rw-r--r-- 2 boinc boinc     15095 Jul 23 06:21 start_atlas.sh
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc         0 Jul 23 06:21 boinc_lockfile
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc      2614 Jul 23 06:21 pandaJob.out
[2025-07-23 07:46:33] -rw------- 1 boinc boinc    977736 Jul 23 06:22 agis_schedconf.cvmfs.json
[2025-07-23 07:46:33] -rw------- 1 boinc boinc   1593031 Jul 23 06:22 agis_ddmendpoints.agis.ALL.json
[2025-07-23 07:46:33] drwx------ 4 boinc boinc      4096 Jul 23 06:22 pilot3
[2025-07-23 07:46:33] -rw------- 1 boinc boinc 274462813 Jul 23 07:45 HITS.45697532._005141.pool.root.1
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc       530 Jul 23 07:45 boinc_task_state.xml
[2025-07-23 07:46:33] -rw------- 1 boinc boinc      1023 Jul 23 07:45 memory_monitor_summary.json
[2025-07-23 07:46:33] -rw------- 1 boinc boinc        95 Jul 23 07:45 pilot_heartbeat.json
[2025-07-23 07:46:33] -rw------- 1 boinc boinc    381698 Jul 23 07:45 log.45697532._005141.job.log.tgz.1
[2025-07-23 07:46:33] -rw------- 1 boinc boinc      7773 Jul 23 07:46 heartbeat.json
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc      8192 Jul 23 07:46 boinc_mmap_file
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc        27 Jul 23 07:46 wrapper_checkpoint.txt
[2025-07-23 07:46:33] -rw------- 1 boinc boinc       823 Jul 23 07:46 pilotlog.txt
[2025-07-23 07:46:33] -rw------- 1 boinc boinc    483854 Jul 23 07:46 log.45697532._005141.job.log.1
[2025-07-23 07:46:33] -rw------- 1 boinc boinc       357 Jul 23 07:46 output.list
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc       620 Jul 23 07:46 runtime_log
[2025-07-23 07:46:33] -rw------- 1 boinc boinc    880640 Jul 23 07:46 result.tar.gz
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc      8721 Jul 23 07:46 runtime_log.err
[2025-07-23 07:46:33] -rw------- 1 boinc boinc       663 Jul 23 07:46 18sKDmVuQy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHKJLDmK4sAzn.diag
[2025-07-23 07:46:33] -rw-r--r-- 1 boinc boinc     22045 Jul 23 07:46 stderr.txt
[2025-07-23 07:46:33] HITS file was successfully produced:
[2025-07-23 07:46:33] -rw------- 1 boinc boinc 274462813 Jul 23 07:45 shared/HITS.pool.root.1
[2025-07-23 07:46:33]  *** Contents of shared directory: ***
[2025-07-23 07:46:33] total 595348
[2025-07-23 07:46:33] -rw-r--r-- 2 boinc boinc 333721542 Jul 23 06:21 ATLAS.root_0
[2025-07-23 07:46:33] -rw-r--r-- 2 boinc boinc    542904 Jul 23 06:21 input.tar.gz
[2025-07-23 07:46:33] -rw-r--r-- 2 boinc boinc     15095 Jul 23 06:21 start_atlas.sh
[2025-07-23 07:46:33] -rw------- 1 boinc boinc 274462813 Jul 23 07:45 HITS.pool.root.1
[2025-07-23 07:46:33] -rw------- 1 boinc boinc    880640 Jul 23 07:46 result.tar.gz
07:46:34 (2227135): run_atlas exited; CPU time 53479.178077
07:46:34 (2227135): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN