Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:59:25 (819321): wrapper (7.7.26015): starting
17:59:25 (819321): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 17:59:25] Arguments: --nthreads 8
[2025-07-22 17:59:25] Threads: 8
[2025-07-22 17:59:25] Checking for CVMFS
[2025-07-22 17:59:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 17:59:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 17:59:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 17:59:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 17:59:25] 2.13.1.0 116762 1764 184276 148635 3 188 32673408 40960000 12066 16776704 0 22599473 99.999 63312 39718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 17:59:25] CVMFS is ok
[2025-07-22 17:59:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 17:59:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 17:59:25] Further information can be found at the LHC@home message board.
[2025-07-22 17:59:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 17:59:25] Checking for apptainer binary...
[2025-07-22 17:59:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 17:59:25] Running /usr/bin/apptainer --version
[2025-07-22 17:59:25] apptainer version 1.4.1-1.el9
[2025-07-22 17:59:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 17:59:25] c-208-39.aglt2.org
[2025-07-22 17:59:25] apptainer works
[2025-07-22 17:59:25] Set ATHENA_PROC_NUMBER=8
[2025-07-22 17:59:25] Set ATHENA_CORE_NUMBER=8
[2025-07-22 17:59:25] Starting ATLAS job with PandaID=6741853341
[2025-07-22 17:59:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 19:20:07]  *** The last 200 lines of the pilot log: ***
[2025-07-22 19:20:07]  replicas=None
[2025-07-22 19:20:07]  scope=mc23_13p6TeV
[2025-07-22 19:20:07]  status=None
[2025-07-22 19:20:07]  status_code=0
[2025-07-22 19:20:07]  storage_token=
[2025-07-22 19:20:07]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6741853341/log.45697490._001530.job.log.tgz.1
[2025-07-22 19:20:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/5f/log.45697490._001530.job.log.tgz.1
[2025-07-22 19:20:07]  workdir=None
[2025-07-22 19:20:07] ]
[2025-07-22 19:20:07] 2025-07-22 23:19:26,946 | INFO     | transferring file log.45697490._001530.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6741853341/log.45697490._001530.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-22 19:20:07] 2025-07-22 23:19:26,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6741853341/log.45697490._001530.job.log.tgz.1 /tmp/boinchome/slots/10/log.45697490._001530.j
[2025-07-22 19:20:07] 2025-07-22 23:19:26,963 | INFO     | adding to output.list: log.45697490._001530.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/5f/log.45697490._001530.job.log.tg
[2025-07-22 19:20:07] 2025-07-22 23:19:26,964 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-22 19:20:07] 2025-07-22 23:19:26,964 | INFO     | summary of transferred files:
[2025-07-22 19:20:07] 2025-07-22 23:19:26,964 | INFO     |  -- lfn=log.45697490._001530.job.log.tgz.1, status_code=0, status=transferred
[2025-07-22 19:20:07] 2025-07-22 23:19:26,964 | INFO     | stage-out finished correctly
[2025-07-22 19:20:07] 2025-07-22 23:19:29,065 | INFO     | monitor loop #347: job 0:6741853341 is in state 'finished'
[2025-07-22 19:20:07] 2025-07-22 23:19:29,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 19:20:07] 2025-07-22 23:19:30,449 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-22 19:20:07] 2025-07-22 23:19:30,501 | INFO     | job 6741853341 has state=finished
[2025-07-22 19:20:07] 2025-07-22 23:19:30,501 | INFO     | preparing for final server update for job 6741853341 in state='finished'
[2025-07-22 19:20:07] 2025-07-22 23:19:30,501 | INFO     | this job has now completed (state=finished)
[2025-07-22 19:20:07] 2025-07-22 23:19:30,501 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 19:20:07] 2025-07-22 23:19:30,501 | INFO     | log transfer has been attempted: DONE
[2025-07-22 19:20:07] 2025-07-22 23:19:30,502 | INFO     | job 6741853341 has finished - writing final server update
[2025-07-22 19:20:07] 2025-07-22 23:19:30,502 | INFO     | total number of processed events: 400 (read)
[2025-07-22 19:20:07] 2025-07-22 23:19:30,502 | INFO     | executing command: lscpu
[2025-07-22 19:20:07] 2025-07-22 23:19:30,555 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 19:20:07] 2025-07-22 23:19:31,568 | INFO     | monitor loop #348: job 0:6741853341 is in state 'finished'
[2025-07-22 19:20:07] 2025-07-22 23:19:31,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 19:20:07] 2025-07-22 23:19:32,773 | INFO     | PID=828741 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 19:20:07] 2025-07-22 23:19:32,773 | INFO     | .. there are 16 such processes running
[2025-07-22 19:20:07] 2025-07-22 23:19:34,072 | INFO     | monitor loop #349: job 0:6741853341 is in state 'finished'
[2025-07-22 19:20:07] 2025-07-22 23:19:34,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,178 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-22 19:20:07] 2025-07-22 23:19:34,182 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3744.2155000000025
[2025-07-22 19:20:07] 2025-07-22 23:19:34,195 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6741853341/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,195 | INFO     | extracted standard info from prmon json
[2025-07-22 19:20:07] 2025-07-22 23:19:34,195 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 19:20:07] 2025-07-22 23:19:34,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 19:20:07] 2025-07-22 23:19:34,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 19:20:07] 2025-07-22 23:19:34,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | fitting pss+swap vs Time
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | sum of square deviations: 115715658.0
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | sum of deviations: 591012316.4999999
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | mean x: 1753224069.5
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | mean y: 2577062.097222222
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | -- intersect: -8951932954.678139
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | intersect: -8951932954.678139
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | chi2: 0.00044185780424343046
[2025-07-22 19:20:07] 2025-07-22 23:19:34,197 | INFO     | -- intersect: -8951932954.678139
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | current memory leak: 5.11 B/s (using 72 data points, chi2=0.00)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | could have reported an average CPU frequency of 3753 MHz (6 samples)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | ..............................
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . Timing measurements:
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . get job = 0 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . initial setup = 2 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . payload setup = 5 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . stage-in = 0 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . payload execution = 4768 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . stage-out = 0 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | . log creation = 0 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,198 | INFO     | ..............................
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | 
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | job summary report
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | --------------------------------------------------
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | PanDA job id: 6741853341
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | task id: 45697490
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | errors: (none)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | pilot state: finished 
[2025-07-22 19:20:07] 2025-07-22 23:19:34,254 | INFO     | transexitcode: 0
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | exeerrorcode: 0
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | exeerrordiag: 
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | exitcode: 0
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | exitmsg: OK
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | cpuconsumptiontime: 35542 s
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | nevents: 400
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | neventsw: 0
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | pid: 841416
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | pgrp: 841416
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | corecount: 8
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | event service: False
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | sizes: {0: 2397503, 4: 2397765, 11: 2397793, 4777: 2424129, 4778: 2433129, 4782: 2433185, 4785: 2433507}
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | --------------------------------------------------
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | 
[2025-07-22 19:20:07] 2025-07-22 23:19:34,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-22 19:20:07] 2025-07-22 23:19:34,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,271 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 19:20:07] 2025-07-22 23:19:34,273 | INFO     | job 6741853341 has completed (purged errors)
[2025-07-22 19:20:07] 2025-07-22 23:19:34,273 | INFO     | overall cleanup function is called
[2025-07-22 19:20:07] 2025-07-22 23:19:35,280 | INFO     | --- collectZombieJob: --- 10, [841416]
[2025-07-22 19:20:07] 2025-07-22 23:19:35,281 | INFO     | zombie collector waiting for pid 841416
[2025-07-22 19:20:07] 2025-07-22 23:19:35,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 19:20:07] 2025-07-22 23:19:35,281 | INFO     | collected zombie processes
[2025-07-22 19:20:07] 2025-07-22 23:19:35,281 | INFO     | will attempt to kill all subprocesses of pid=841416
[2025-07-22 19:20:07] 2025-07-22 23:19:35,636 | INFO     | process IDs to be killed: [841416] (in reverse order)
[2025-07-22 19:20:07] 2025-07-22 23:19:35,750 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 19:20:07] 2025-07-22 23:19:35,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 19:20:07] 2025-07-22 23:19:35,766 | INFO     | did not find any defunct processes belonging to 841416
[2025-07-22 19:20:07] 2025-07-22 23:19:35,782 | INFO     | did not find any defunct processes belonging to 841416
[2025-07-22 19:20:07] 2025-07-22 23:19:35,782 | INFO     | ready for new job
[2025-07-22 19:20:07] 2025-07-22 23:19:35,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 19:20:07] 2025-07-22 23:19:35,783 | INFO     | ***************************************
[2025-07-22 19:20:07] 2025-07-22 23:19:35,783 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 19:20:07] 2025-07-22 23:19:35,783 | INFO     | ***************************************
[2025-07-22 19:20:07] 2025-07-22 23:19:35,783 | INFO     | 
[2025-07-22 19:20:07] 2025-07-22 23:19:35,787 | INFO     | architecture information:
[2025-07-22 19:20:07] 2025-07-22 23:19:35,788 | INFO     | executing command: cat /etc/os-release
[2025-07-22 19:20:07] 2025-07-22 23:19:35,803 | INFO     | cat /etc/os-release:
[2025-07-22 19:20:07] NAME="CentOS Linux"
[2025-07-22 19:20:07] VERSION="7 (Core)"
[2025-07-22 19:20:07] ID="centos"
[2025-07-22 19:20:07] ID_LIKE="rhel fedora"
[2025-07-22 19:20:07] VERSION_ID="7"
[2025-07-22 19:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 19:20:07] ANSI_COLOR="0;31"
[2025-07-22 19:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 19:20:07] HOME_URL="https://www.centos.org/"
[2025-07-22 19:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 19:20:07] 
[2025-07-22 19:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 19:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 19:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 19:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 19:20:07] 
[2025-07-22 19:20:07] 2025-07-22 23:19:35,804 | INFO     | ***************************************
[2025-07-22 19:20:07] 2025-07-22 23:19:36,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-22 19:20:07] 2025-07-22 23:19:36,320 | INFO     | sufficient remaining disk space (159589072896 B)
[2025-07-22 19:20:07] 2025-07-22 23:19:36,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 19:20:07] 2025-07-22 23:19:36,320 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 19:20:07] 2025-07-22 23:19:36,320 | INFO     | update_server=False
[2025-07-22 19:20:07] 2025-07-22 23:19:36,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 19:20:07] 2025-07-22 23:19:36,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 19:20:07] 2025-07-22 23:19:36,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 19:20:07] 2025-07-22 23:19:36,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 19:20:07] 2025-07-22 23:19:36,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 19:20:07] 2025-07-22 23:19:36,574 | INFO     | will abort loop
[2025-07-22 19:20:07] 2025-07-22 23:19:36,764 | INFO     | all payload control threads have been joined
[2025-07-22 19:20:07] 2025-07-22 23:19:36,849 | INFO     | all data control threads have been joined
[2025-07-22 19:20:07] 2025-07-22 23:19:37,325 | INFO     | [job] retrieve thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,365 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 19:20:07] 2025-07-22 23:19:37,541 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,580 | INFO     | [job] job monitor thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,686 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,768 | INFO     | [payload] control thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,854 | INFO     | [data] control thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:37,930 | INFO     | all job control threads have been joined
[2025-07-22 19:20:07] 2025-07-22 23:19:38,270 | INFO     | [payload] failed_post thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:38,375 | INFO     | [data] copytool_in thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:38,609 | INFO     | [payload] validate_post thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:38,774 | INFO     | [job] validate thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:38,934 | INFO     | [job] control thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:39,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 19:20:07] 2025-07-22 23:19:39,538 | INFO     | [data] copytool_out thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:40,270 | INFO     | [job] queue monitor thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:40,512 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:47,042 | INFO     | job.realtimelogging is not enabled
[2025-07-22 19:20:07] 2025-07-22 23:19:48,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 19:20:07] 2025-07-22 23:19:49,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140382858061632)>', '<ExcThread(monitor, started 140382499215104)>']
[2025-07-22 19:20:07] 2025-07-22 23:19:54,711 | INFO     | all workflow threads have been joined
[2025-07-22 19:20:07] 2025-07-22 23:19:54,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 19:20:07] 2025-07-22 23:19:54,711 | INFO     | traces error code: 0
[2025-07-22 19:20:07] 2025-07-22 23:19:54,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 19:20:07] 2025-07-22 23:20:07,277 | INFO     | PID=828741 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 19:20:07] 2025-07-22 23:20:07,277 | INFO     | .. there are 15 such processes running
[2025-07-22 19:20:07] 2025-07-22 23:20:07,278 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 19:20:07] 2025-07-22 23:20:07,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 19:20:07] 2025-07-22 23:20:07,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 19:20:07] 2025-07-22 23:20:07,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 19:20:07] 2025-07-22 23:20:07,278 | INFO     | [monitor] control thread has ended
[2025-07-22 19:20:07] 2025-07-22 23:20:07,361 [wrapper] ==== pilot stdout END ====
[2025-07-22 19:20:07] 2025-07-22 23:20:07,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 19:20:07] 2025-07-22 23:20:07,369 [wrapper] pilotpid: 828741
[2025-07-22 19:20:07] 2025-07-22 23:20:07,371 [wrapper] Pilot exit status: 0
[2025-07-22 19:20:07] 2025-07-22 23:20:07,381 [wrapper] pandaids: 6741853341
[2025-07-22 19:20:07] 2025-07-22 23:20:07,473 [wrapper] cleanup supervisor_pilot 1218608 828743
[2025-07-22 19:20:07] 2025-07-22 23:20:07,477 [wrapper] Test setup, not cleaning
[2025-07-22 19:20:07] 2025-07-22 23:20:07,479 [wrapper] apfmon messages muted
[2025-07-22 19:20:07] 2025-07-22 23:20:07,483 [wrapper] ==== wrapper stdout END ====
[2025-07-22 19:20:07] 2025-07-22 23:20:07,486 [wrapper] ==== wrapper stderr END ====
[2025-07-22 19:20:07]  *** Error codes and diagnostics ***
[2025-07-22 19:20:07]     "exeErrorCode": 0,
[2025-07-22 19:20:07]     "exeErrorDiag": "",
[2025-07-22 19:20:07]     "pilotErrorCode": 0,
[2025-07-22 19:20:07]     "pilotErrorDiag": "",
[2025-07-22 19:20:07]  *** Listing of results directory ***
[2025-07-22 19:20:07] total 642060
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 10:25 pilot3.tar.gz
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 11:05 queuedata.json
[2025-07-22 19:20:07] -rwx------. 1 boincer umatlas     36292 Jul 22 11:09 runpilot2-wrapper.sh
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas       100 Jul 22 17:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 19:20:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 17:59 run_atlas
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas       105 Jul 22 17:59 job.xml
[2025-07-22 19:20:07] -rw-r--r--. 2 boincer umatlas 347211936 Jul 22 17:59 EVNT.45697488._000081.pool.root.1
[2025-07-22 19:20:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 17:59 start_atlas.sh
[2025-07-22 19:20:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 17:59 shared
[2025-07-22 19:20:07] -rw-r--r--. 2 boincer umatlas    542898 Jul 22 17:59 input.tar.gz
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas         0 Jul 22 17:59 boinc_lockfile
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas      2589 Jul 22 17:59 pandaJob.out
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas    977736 Jul 22 17:59 agis_schedconf.cvmfs.json
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas   1593031 Jul 22 17:59 agis_ddmendpoints.agis.ALL.json
[2025-07-22 19:20:07] drwx------. 4 boincer umatlas      4096 Jul 22 17:59 pilot3
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas      7173 Jul 22 19:10 init_data.xml
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas       529 Jul 22 19:18 boinc_task_state.xml
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas 304847376 Jul 22 19:18 HITS.45697490._001530.pool.root.1
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas      1031 Jul 22 19:19 memory_monitor_summary.json
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas    296803 Jul 22 19:19 log.45697490._001530.job.log.tgz.1
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas      7762 Jul 22 19:19 heartbeat.json
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas        27 Jul 22 19:20 wrapper_checkpoint.txt
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas        95 Jul 22 19:20 pilot_heartbeat.json
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas       822 Jul 22 19:20 pilotlog.txt
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas    469345 Jul 22 19:20 log.45697490._001530.job.log.1
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 19:20 boinc_mmap_file
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas       357 Jul 22 19:20 output.list
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas       620 Jul 22 19:20 runtime_log
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas    788480 Jul 22 19:20 result.tar.gz
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas      8674 Jul 22 19:20 runtime_log.err
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas       652 Jul 22 19:20 IeOLDmCnTy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYfJLDmUY5nmn.diag
[2025-07-22 19:20:07] -rw-r--r--. 1 boincer umatlas     21918 Jul 22 19:20 stderr.txt
[2025-07-22 19:20:07] HITS file was successfully produced:
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas 304847376 Jul 22 19:18 shared/HITS.pool.root.1
[2025-07-22 19:20:07]  *** Contents of shared directory: ***
[2025-07-22 19:20:07] total 638108
[2025-07-22 19:20:07] -rw-r--r--. 2 boincer umatlas 347211936 Jul 22 17:59 ATLAS.root_0
[2025-07-22 19:20:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 17:59 start_atlas.sh
[2025-07-22 19:20:07] -rw-r--r--. 2 boincer umatlas    542898 Jul 22 17:59 input.tar.gz
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas 304847376 Jul 22 19:18 HITS.pool.root.1
[2025-07-22 19:20:07] -rw-------. 1 boincer umatlas    788480 Jul 22 19:20 result.tar.gz
19:20:08 (819321): run_atlas exited; CPU time 35650.277095
19:20:08 (819321): called boinc_finish(0)

</stderr_txt>
]]>

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