Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:18 (3057597): wrapper (7.7.26015): starting
00:10:18 (3057597): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 00:10:18] Arguments: --nthreads 4
[2025-07-25 00:10:18] Threads: 4
[2025-07-25 00:10:18] Checking for CVMFS
[2025-07-25 00:10:18] No cvmfs_config command found, will try listing directly
[2025-07-25 00:10:18] CVMFS is ok
[2025-07-25 00:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 00:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 00:10:18] Further information can be found at the LHC@home message board.
[2025-07-25 00:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 00:10:18] Checking for apptainer binary...
[2025-07-25 00:10:18] which: no apptainer in ((null))
[2025-07-25 00:10:18] apptainer is not installed, using version from CVMFS
[2025-07-25 00:10:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 00:10:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-25 00:10:18] apptainer works
[2025-07-25 00:10:18] Set ATHENA_PROC_NUMBER=4
[2025-07-25 00:10:18] Set ATHENA_CORE_NUMBER=4
[2025-07-25 00:10:18] Starting ATLAS job with PandaID=6741783651
[2025-07-25 00:10:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:46:21 (3508894): wrapper (7.7.26015): starting
02:46:21 (3508894): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 02:46:21] Arguments: --nthreads 4
[2025-07-25 02:46:21] Threads: 4
[2025-07-25 02:46:21] This job has been restarted, cleaning up previous attempt
[2025-07-25 02:46:21] Checking for CVMFS
[2025-07-25 02:46:21] No cvmfs_config command found, will try listing directly
[2025-07-25 02:46:21] CVMFS is ok
[2025-07-25 02:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 02:46:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 02:46:21] Further information can be found at the LHC@home message board.
[2025-07-25 02:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 02:46:21] Checking for apptainer binary...
[2025-07-25 02:46:21] which: no apptainer in ((null))
[2025-07-25 02:46:21] apptainer is not installed, using version from CVMFS
[2025-07-25 02:46:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 02:46:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-25 02:46:21] apptainer works
[2025-07-25 02:46:21] Set ATHENA_PROC_NUMBER=4
[2025-07-25 02:46:21] Set ATHENA_CORE_NUMBER=4
[2025-07-25 02:46:21] Starting ATLAS job with PandaID=6741783651
[2025-07-25 02:46:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 07:45:22]  *** The last 200 lines of the pilot log: ***
[2025-07-25 07:45:22] 2025-07-25 05:44:49,234 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 07:45:22] 2025-07-25 05:44:49,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 07:45:22] 2025-07-25 05:44:49,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 07:45:22] 2025-07-25 05:44:49,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 07:45:22] 2025-07-25 05:44:49,239 | INFO     | fitting pss+swap vs Time
[2025-07-25 07:45:22] 2025-07-25 05:44:49,240 | INFO     | sum of square deviations: 7799669962.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,242 | INFO     | sum of deviations: 13046312658.000006
[2025-07-25 07:45:22] 2025-07-25 05:44:49,242 | INFO     | mean x: 1753413322.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,243 | INFO     | mean y: 2372254.232081911
[2025-07-25 07:45:22] 2025-07-25 05:44:49,243 | INFO     | -- intersect: -2930518307.6717267
[2025-07-25 07:45:22] 2025-07-25 05:44:49,243 | INFO     | intersect: -2930518307.6717267
[2025-07-25 07:45:22] 2025-07-25 05:44:49,243 | INFO     | chi2: 1.3067991968944979
[2025-07-25 07:45:22] 2025-07-25 05:44:49,244 | INFO     | sum of square deviations: 7407141672.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,246 | INFO     | sum of deviations: 12548026380.500004
[2025-07-25 07:45:22] 2025-07-25 05:44:49,246 | INFO     | mean x: 1753413169.5
[2025-07-25 07:45:22] 2025-07-25 05:44:49,246 | INFO     | mean y: 2372060.628472222
[2025-07-25 07:45:22] 2025-07-25 05:44:49,246 | INFO     | -- intersect: -2967987584.3034177
[2025-07-25 07:45:22] 2025-07-25 05:44:49,246 | INFO     | intersect: -2967987584.3034177
[2025-07-25 07:45:22] 2025-07-25 05:44:49,247 | INFO     | chi2: 1.3069238422780953
[2025-07-25 07:45:22] 2025-07-25 05:44:49,247 | INFO     | current chi2=1.3069238422780953 (change=-0.00953822009484514 %)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,247 | INFO     | right removable region: 287
[2025-07-25 07:45:22] 2025-07-25 05:44:49,247 | INFO     | sum of square deviations: 7407141672.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,249 | INFO     | sum of deviations: -18410857374.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,250 | INFO     | mean x: 1753413474.5
[2025-07-25 07:45:22] 2025-07-25 05:44:49,250 | INFO     | mean y: 2384334.2569444445
[2025-07-25 07:45:22] 2025-07-25 05:44:49,250 | INFO     | -- intersect: 4360589810.290843
[2025-07-25 07:45:22] 2025-07-25 05:44:49,250 | INFO     | intersect: 4360589810.290843
[2025-07-25 07:45:22] 2025-07-25 05:44:49,250 | INFO     | chi2: 0.09672549512056913
[2025-07-25 07:45:22] 2025-07-25 05:44:49,250 | INFO     | current chi2=0.09672549512056913 (change=92.59828936607633 %)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,251 | INFO     | sum of square deviations: 7028008982.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,253 | INFO     | sum of deviations: -10356519548.999998
[2025-07-25 07:45:22] 2025-07-25 05:44:49,253 | INFO     | mean x: 1753413627.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,253 | INFO     | mean y: 2381091.7879858655
[2025-07-25 07:45:22] 2025-07-25 05:44:49,253 | INFO     | -- intersect: 2586222767.5766253
[2025-07-25 07:45:22] 2025-07-25 05:44:49,253 | INFO     | intersect: 2586222767.5766253
[2025-07-25 07:45:22] 2025-07-25 05:44:49,254 | INFO     | chi2: 0.0701332487858068
[2025-07-25 07:45:22] 2025-07-25 05:44:49,254 | INFO     | current chi2=0.0701332487858068 (change=27.49248923628137 %)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,254 | INFO     | sum of square deviations: 6662039329.5
[2025-07-25 07:45:22] 2025-07-25 05:44:49,256 | INFO     | sum of deviations: -4571286167.499999
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | mean x: 1753413779.5
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | mean y: 2378678.7517985613
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | -- intersect: 1205517201.3119488
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | intersect: 1205517201.3119488
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | chi2: 0.05647475821555088
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | current chi2=0.05647475821555088 (change=19.47505756074436 %)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,257 | INFO     | left removable region: 30
[2025-07-25 07:45:22] 2025-07-25 05:44:49,258 | INFO     | sum of square deviations: 5263458688.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,260 | INFO     | sum of deviations: 9266368419.00001
[2025-07-25 07:45:22] 2025-07-25 05:44:49,260 | INFO     | mean x: 1753414054.0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,260 | INFO     | mean y: 2372084.5642023347
[2025-07-25 07:45:22] 2025-07-25 05:44:49,260 | INFO     | -- intersect: -3084529813.6988544
[2025-07-25 07:45:22] 2025-07-25 05:44:49,260 | INFO     | intersect: -3084529813.6988544
[2025-07-25 07:45:22] 2025-07-25 05:44:49,260 | INFO     | chi2: 0.0004207641388511215
[2025-07-25 07:45:22] 2025-07-25 05:44:49,261 | INFO     | -- intersect: -3084529813.6988544
[2025-07-25 07:45:22] 2025-07-25 05:44:49,261 | INFO     | current memory leak: 1.76 B/s (using 257 data points, chi2=0.00)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,261 | INFO     | could have reported an average CPU frequency of 2603 MHz (13 samples)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,261 | INFO     | ..............................
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . Timing measurements:
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . get job = 0 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . initial setup = 1 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . payload setup = 6 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . stage-in = 0 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . payload execution = 17865 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . stage-out = 1 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | . log creation = 0 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,262 | INFO     | ..............................
[2025-07-25 07:45:22] 2025-07-25 05:44:49,814 | INFO     | 
[2025-07-25 07:45:22] 2025-07-25 05:44:49,814 | INFO     | job summary report
[2025-07-25 07:45:22] 2025-07-25 05:44:49,814 | INFO     | --------------------------------------------------
[2025-07-25 07:45:22] 2025-07-25 05:44:49,814 | INFO     | PanDA job id: 6741783651
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | task id: 45697490
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | errors: (none)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | pilot state: finished 
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | transexitcode: 0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | exeerrorcode: 0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | exeerrordiag: 
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | exitcode: 0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | exitmsg: OK
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | cpuconsumptiontime: 69019 s
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | nevents: 400
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | neventsw: 0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | pid: 3519488
[2025-07-25 07:45:22] 2025-07-25 05:44:49,815 | INFO     | pgrp: 3519488
[2025-07-25 07:45:22] 2025-07-25 05:44:49,816 | INFO     | corecount: 4
[2025-07-25 07:45:22] 2025-07-25 05:44:49,816 | INFO     | event service: False
[2025-07-25 07:45:22] 2025-07-25 05:44:49,816 | INFO     | sizes: {0: 2397520, 4: 2397782, 11: 2397810, 17875: 2430015, 17877: 2439091, 17884: 2439229}
[2025-07-25 07:45:22] 2025-07-25 05:44:49,816 | INFO     | --------------------------------------------------
[2025-07-25 07:45:22] 2025-07-25 05:44:49,816 | INFO     | 
[2025-07-25 07:45:22] 2025-07-25 05:44:49,816 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-07-25 07:45:22] 2025-07-25 05:44:49,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 07:45:22] 2025-07-25 05:44:49,837 | INFO     | job 6741783651 has completed (purged errors)
[2025-07-25 07:45:22] 2025-07-25 05:44:49,837 | INFO     | overall cleanup function is called
[2025-07-25 07:45:22] 2025-07-25 05:44:50,845 | INFO     | --- collectZombieJob: --- 10, [3519488]
[2025-07-25 07:45:22] 2025-07-25 05:44:50,845 | INFO     | zombie collector waiting for pid 3519488
[2025-07-25 07:45:22] 2025-07-25 05:44:50,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 07:45:22] 2025-07-25 05:44:50,845 | INFO     | collected zombie processes
[2025-07-25 07:45:22] 2025-07-25 05:44:50,845 | INFO     | will attempt to kill all subprocesses of pid=3519488
[2025-07-25 07:45:22] 2025-07-25 05:44:51,175 | INFO     | process IDs to be killed: [3519488] (in reverse order)
[2025-07-25 07:45:22] 2025-07-25 05:44:51,288 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 07:45:22] 2025-07-25 05:44:51,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 07:45:22] 2025-07-25 05:44:51,298 | INFO     | did not find any defunct processes belonging to 3519488
[2025-07-25 07:45:22] 2025-07-25 05:44:51,308 | INFO     | did not find any defunct processes belonging to 3519488
[2025-07-25 07:45:22] 2025-07-25 05:44:51,308 | INFO     | ready for new job
[2025-07-25 07:45:22] 2025-07-25 05:44:51,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 07:45:22] 2025-07-25 05:44:51,310 | INFO     | ***************************************
[2025-07-25 07:45:22] 2025-07-25 05:44:51,311 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 07:45:22] 2025-07-25 05:44:51,311 | INFO     | ***************************************
[2025-07-25 07:45:22] 2025-07-25 05:44:51,311 | INFO     | 
[2025-07-25 07:45:22] 2025-07-25 05:44:51,314 | INFO     | architecture information:
[2025-07-25 07:45:22] 2025-07-25 05:44:51,315 | INFO     | executing command: cat /etc/os-release
[2025-07-25 07:45:22] 2025-07-25 05:44:51,330 | INFO     | cat /etc/os-release:
[2025-07-25 07:45:22] NAME="CentOS Linux"
[2025-07-25 07:45:22] VERSION="7 (Core)"
[2025-07-25 07:45:22] ID="centos"
[2025-07-25 07:45:22] ID_LIKE="rhel fedora"
[2025-07-25 07:45:22] VERSION_ID="7"
[2025-07-25 07:45:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 07:45:22] ANSI_COLOR="0;31"
[2025-07-25 07:45:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 07:45:22] HOME_URL="https://www.centos.org/"
[2025-07-25 07:45:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 07:45:22] 
[2025-07-25 07:45:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 07:45:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 07:45:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 07:45:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 07:45:22] 
[2025-07-25 07:45:22] 2025-07-25 05:44:51,331 | INFO     | ***************************************
[2025-07-25 07:45:22] 2025-07-25 05:44:51,834 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-07-25 07:45:22] 2025-07-25 05:44:51,850 | INFO     | sufficient remaining disk space (644434886656 B)
[2025-07-25 07:45:22] 2025-07-25 05:44:51,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 07:45:22] 2025-07-25 05:44:51,850 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 07:45:22] 2025-07-25 05:44:51,851 | INFO     | update_server=False
[2025-07-25 07:45:22] 2025-07-25 05:44:51,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 07:45:22] 2025-07-25 05:44:51,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 07:45:22] 2025-07-25 05:44:51,851 | INFO     | aborting loop
[2025-07-25 07:45:22] 2025-07-25 05:44:52,124 | INFO     | all data control threads have been joined
[2025-07-25 07:45:22] 2025-07-25 05:44:52,533 | INFO     | all job control threads have been joined
[2025-07-25 07:45:22] 2025-07-25 05:44:52,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 07:45:22] 2025-07-25 05:44:52,731 | INFO     | all payload control threads have been joined
[2025-07-25 07:45:22] 2025-07-25 05:44:52,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 07:45:22] 2025-07-25 05:44:52,852 | INFO     | [job] job monitor thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:52,856 | INFO     | [job] retrieve thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,129 | INFO     | [data] control thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,538 | INFO     | [job] control thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,736 | INFO     | [payload] control thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,765 | INFO     | [payload] validate_post thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,835 | INFO     | [job] validate thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:53,934 | INFO     | [data] copytool_in thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:54,057 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:54,283 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:54,354 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:54,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 07:45:22] 2025-07-25 05:44:54,373 | INFO     | [payload] failed_post thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:54,701 | INFO     | [data] copytool_out thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:55,373 | INFO     | [job] queue monitor thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:56,790 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 07:45:22] 2025-07-25 05:44:58,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22754327103296)>', '<ExcThread(monitor, started 22754092873472)>']
[2025-07-25 07:45:22] 2025-07-25 05:45:03,732 | INFO     | all workflow threads have been joined
[2025-07-25 07:45:22] 2025-07-25 05:45:03,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 07:45:22] 2025-07-25 05:45:03,732 | INFO     | traces error code: 0
[2025-07-25 07:45:22] 2025-07-25 05:45:03,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 07:45:22] 2025-07-25 05:45:22,485 | INFO     | PID=3512564 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 07:45:22] 2025-07-25 05:45:22,485 | INFO     | .. there are 13 such processes running
[2025-07-25 07:45:22] 2025-07-25 05:45:22,485 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 07:45:22] 2025-07-25 05:45:22,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 07:45:22] 2025-07-25 05:45:22,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 07:45:22] 2025-07-25 05:45:22,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 07:45:22] 2025-07-25 05:45:22,486 | INFO     | [monitor] control thread has ended
[2025-07-25 07:45:22] 2025-07-25 05:45:22,617 [wrapper] ==== pilot stdout END ====
[2025-07-25 07:45:22] 2025-07-25 05:45:22,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 07:45:22] 2025-07-25 05:45:22,623 [wrapper] pilotpid: 3512564
[2025-07-25 07:45:22] 2025-07-25 05:45:22,626 [wrapper] Pilot exit status: 0
[2025-07-25 07:45:22] 2025-07-25 05:45:22,637 [wrapper] pandaids: 6741783651 6741783651
[2025-07-25 07:45:22] 2025-07-25 05:45:22,698 [wrapper] cleanup supervisor_pilot   45658 3512565
[2025-07-25 07:45:22] 2025-07-25 05:45:22,702 [wrapper] Test setup, not cleaning
[2025-07-25 07:45:22] 2025-07-25 05:45:22,705 [wrapper] apfmon messages muted
[2025-07-25 07:45:22] 2025-07-25 05:45:22,709 [wrapper] ==== wrapper stdout END ====
[2025-07-25 07:45:22] 2025-07-25 05:45:22,711 [wrapper] ==== wrapper stderr END ====
[2025-07-25 07:45:22]  *** Error codes and diagnostics ***
[2025-07-25 07:45:22]     "exeErrorCode": 0,
[2025-07-25 07:45:22]     "exeErrorDiag": "",
[2025-07-25 07:45:22]     "pilotErrorCode": 0,
[2025-07-25 07:45:22]     "pilotErrorDiag": "",
[2025-07-25 07:45:22]  *** Listing of results directory ***
[2025-07-25 07:45:22] total 980644
[2025-07-25 07:45:22] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc    530466 Jul 22 16:25 pilot3.tar.gz
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc      5112 Jul 22 16:35 queuedata.json
[2025-07-25 07:45:22] -rwx------ 1 boinc boinc     36292 Jul 22 16:38 runpilot2-wrapper.sh
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc       100 Jul 25 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 07:45:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 00:10 run_atlas
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc       105 Jul 25 00:10 job.xml
[2025-07-25 07:45:22] -rw-r--r-- 3 boinc boinc 344175811 Jul 25 00:10 EVNT.45697488._000050.pool.root.1
[2025-07-25 07:45:22] -rw-r--r-- 3 boinc boinc 344175811 Jul 25 00:10 ATLAS.root_0
[2025-07-25 07:45:22] -rw-r--r-- 2 boinc boinc     15095 Jul 25 00:10 start_atlas.sh
[2025-07-25 07:45:22] drwxrwx--x 2 boinc boinc      4096 Jul 25 00:10 shared
[2025-07-25 07:45:22] -rw-r--r-- 2 boinc boinc    542891 Jul 25 00:10 input.tar.gz
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc         0 Jul 25 00:10 boinc_lockfile
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc      2587 Jul 25 02:46 pandaJob.out
[2025-07-25 07:45:22] -rw------- 1 boinc boinc    979709 Jul 25 02:46 agis_schedconf.cvmfs.json
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc      6642 Jul 25 06:11 init_data.xml
[2025-07-25 07:45:22] -rw------- 1 boinc boinc 307844648 Jul 25 07:43 HITS.45697490._000967.pool.root.1
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc       531 Jul 25 07:44 boinc_task_state.xml
[2025-07-25 07:45:22] -rw------- 1 boinc boinc      1039 Jul 25 07:44 memory_monitor_summary.json
[2025-07-25 07:45:22] -rw------- 1 boinc boinc        97 Jul 25 07:44 pilot_heartbeat.json
[2025-07-25 07:45:22] -rw------- 1 boinc boinc   1593052 Jul 25 07:44 agis_ddmendpoints.agis.ALL.json
[2025-07-25 07:45:22] -rw------- 1 boinc boinc    381424 Jul 25 07:44 log.45697490._000967.job.log.tgz.1
[2025-07-25 07:45:22] -rw------- 1 boinc boinc      7824 Jul 25 07:44 heartbeat.json
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc        28 Jul 25 07:45 wrapper_checkpoint.txt
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc      8192 Jul 25 07:45 boinc_mmap_file
[2025-07-25 07:45:22] -rw------- 1 boinc boinc       823 Jul 25 07:45 pilotlog.txt
[2025-07-25 07:45:22] -rw------- 1 boinc boinc   1663028 Jul 25 07:45 log.45697490._000967.job.log.1
[2025-07-25 07:45:22] -rw------- 1 boinc boinc       357 Jul 25 07:45 output.list
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc       620 Jul 25 07:45 runtime_log
[2025-07-25 07:45:22] -rw------- 1 boinc boinc   2068480 Jul 25 07:45 result.tar.gz
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc      9104 Jul 25 07:45 runtime_log.err
[2025-07-25 07:45:22] -rw------- 1 boinc boinc       791 Jul 25 07:45 MnILDmtJTy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4XJLDmG7Olqn.diag
[2025-07-25 07:45:22] -rw-r--r-- 1 boinc boinc     22602 Jul 25 07:45 stderr.txt
[2025-07-25 07:45:22] HITS file was successfully produced:
[2025-07-25 07:45:22] -rw------- 1 boinc boinc 307844648 Jul 25 07:43 shared/HITS.pool.root.1
[2025-07-25 07:45:22]  *** Contents of shared directory: ***
[2025-07-25 07:45:22] total 639320
[2025-07-25 07:45:22] -rw-r--r-- 3 boinc boinc 344175811 Jul 25 00:10 ATLAS.root_0
[2025-07-25 07:45:22] -rw-r--r-- 2 boinc boinc     15095 Jul 25 00:10 start_atlas.sh
[2025-07-25 07:45:22] -rw-r--r-- 2 boinc boinc    542891 Jul 25 00:10 input.tar.gz
[2025-07-25 07:45:22] -rw------- 1 boinc boinc 307844648 Jul 25 07:43 HITS.pool.root.1
[2025-07-25 07:45:22] -rw------- 1 boinc boinc   2068480 Jul 25 07:45 result.tar.gz
07:45:24 (3508894): run_atlas exited; CPU time 69663.762189
07:45:24 (3508894): called boinc_finish(0)

</stderr_txt>
]]>

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