Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:53 (26207): wrapper (7.7.26015): starting
05:58:53 (26207): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 05:58:53] Arguments: --nthreads 8
[2025-07-23 05:58:53] Threads: 8
[2025-07-23 05:58:53] Checking for CVMFS
[2025-07-23 05:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 05:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 05:58:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 06:15:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 06:15:43] 2.11.2.0 20781 103247 138876 148644 3 52 16052123 25165824 2653 130560 0 77771102 99.858 49016239 3574 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 06:15:43] CVMFS is ok
[2025-07-23 06:15:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 06:15:43] Checking for apptainer binary...
[2025-07-23 06:15:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 06:15:43] Running /usr/bin/apptainer --version
[2025-07-23 06:15:43] apptainer version 1.3.2-1.el7
[2025-07-23 06:15:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 06:15:51] cg-vwn441.simple-grid.lan
[2025-07-23 06:15:51] apptainer works
[2025-07-23 06:15:51] Set ATHENA_PROC_NUMBER=8
[2025-07-23 06:15:51] Set ATHENA_CORE_NUMBER=8
[2025-07-23 06:15:51] Starting ATLAS job with PandaID=6742061098
[2025-07-23 06:15:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 12:16:18]  *** The last 200 lines of the pilot log: ***
[2025-07-23 12:16:18] 2025-07-23 10:00:35,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 12:16:18] 2025-07-23 10:00:35,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 12:16:18] 2025-07-23 10:00:35,718 | INFO     | fitting pss+swap vs Time
[2025-07-23 12:16:18] 2025-07-23 10:00:35,719 | INFO     | sum of square deviations: 11762304260.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,723 | INFO     | sum of deviations: -56443116694.999985
[2025-07-23 12:16:18] 2025-07-23 10:00:35,723 | INFO     | mean x: 1753254496.5
[2025-07-23 12:16:18] 2025-07-23 10:00:35,723 | INFO     | mean y: 2566834.529761905
[2025-07-23 12:16:18] 2025-07-23 10:00:35,723 | INFO     | -- intersect: 8415811888.775871
[2025-07-23 12:16:18] 2025-07-23 10:00:35,723 | INFO     | intersect: 8415811888.775871
[2025-07-23 12:16:18] 2025-07-23 10:00:35,724 | INFO     | chi2: 2.6966113568913377
[2025-07-23 12:16:18] 2025-07-23 10:00:35,724 | INFO     | sum of square deviations: 11244973630.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,728 | INFO     | sum of deviations: -32119350041.999996
[2025-07-23 12:16:18] 2025-07-23 10:00:35,728 | INFO     | mean x: 1753254344.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,728 | INFO     | mean y: 2573920.4320241692
[2025-07-23 12:16:18] 2025-07-23 10:00:35,728 | INFO     | -- intersect: 5010446045.392541
[2025-07-23 12:16:18] 2025-07-23 10:00:35,728 | INFO     | intersect: 5010446045.392541
[2025-07-23 12:16:18] 2025-07-23 10:00:35,729 | INFO     | chi2: 1.8545316053717642
[2025-07-23 12:16:18] 2025-07-23 10:00:35,729 | INFO     | current chi2=1.8545316053717642 (change=31.22733090059836 %)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,730 | INFO     | sum of square deviations: 10743038637.5
[2025-07-23 12:16:18] 2025-07-23 10:00:35,733 | INFO     | sum of deviations: -31802408956.499992
[2025-07-23 12:16:18] 2025-07-23 10:00:35,733 | INFO     | mean x: 1753254191.5
[2025-07-23 12:16:18] 2025-07-23 10:00:35,733 | INFO     | mean y: 2574016.726993865
[2025-07-23 12:16:18] 2025-07-23 10:00:35,733 | INFO     | -- intersect: 5192698401.847521
[2025-07-23 12:16:18] 2025-07-23 10:00:35,733 | INFO     | intersect: 5192698401.847521
[2025-07-23 12:16:18] 2025-07-23 10:00:35,734 | INFO     | chi2: 1.853223097292761
[2025-07-23 12:16:18] 2025-07-23 10:00:35,734 | INFO     | current chi2=1.853223097292761 (change=0.07055733508196922 %)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,734 | INFO     | right removable region: 325
[2025-07-23 12:16:18] 2025-07-23 10:00:35,735 | INFO     | sum of square deviations: 11244973630.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,738 | INFO     | sum of deviations: -112837136381.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,738 | INFO     | mean x: 1753254649.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,738 | INFO     | mean y: 2583356.3625377645
[2025-07-23 12:16:18] 2025-07-23 10:00:35,738 | INFO     | -- intersect: 17595531143.45622
[2025-07-23 12:16:18] 2025-07-23 10:00:35,738 | INFO     | intersect: 17595531143.45622
[2025-07-23 12:16:18] 2025-07-23 10:00:35,739 | INFO     | chi2: 1.147573474702988
[2025-07-23 12:16:18] 2025-07-23 10:00:35,739 | INFO     | current chi2=1.147573474702988 (change=57.44386851407781 %)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,740 | INFO     | sum of square deviations: 10743038637.5
[2025-07-23 12:16:18] 2025-07-23 10:00:35,743 | INFO     | sum of deviations: -111879190093.5
[2025-07-23 12:16:18] 2025-07-23 10:00:35,743 | INFO     | mean x: 1753254801.5
[2025-07-23 12:16:18] 2025-07-23 10:00:35,743 | INFO     | mean y: 2583047.8496932513
[2025-07-23 12:16:18] 2025-07-23 10:00:35,744 | INFO     | -- intersect: 18261172059.5901
[2025-07-23 12:16:18] 2025-07-23 10:00:35,744 | INFO     | intersect: 18261172059.5901
[2025-07-23 12:16:18] 2025-07-23 10:00:35,744 | INFO     | chi2: 1.128615193159802
[2025-07-23 12:16:18] 2025-07-23 10:00:35,744 | INFO     | current chi2=1.128615193159802 (change=1.6520320451021788 %)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,744 | INFO     | left removable region: 20
[2025-07-23 12:16:18] 2025-07-23 10:00:35,745 | INFO     | sum of square deviations: 8797783560.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,748 | INFO     | sum of deviations: -69213857522.00003
[2025-07-23 12:16:18] 2025-07-23 10:00:35,748 | INFO     | mean x: 1753254771.0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,748 | INFO     | mean y: 2585270.406557377
[2025-07-23 12:16:18] 2025-07-23 10:00:35,748 | INFO     | -- intersect: 13795778191.347294
[2025-07-23 12:16:18] 2025-07-23 10:00:35,748 | INFO     | intersect: 13795778191.347294
[2025-07-23 12:16:18] 2025-07-23 10:00:35,749 | INFO     | chi2: 0.2511884719680645
[2025-07-23 12:16:18] 2025-07-23 10:00:35,749 | INFO     | -- intersect: 13795778191.347294
[2025-07-23 12:16:18] 2025-07-23 10:00:35,749 | INFO     | current memory leak: -7.87 B/s (using 305 data points, chi2=0.25)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,750 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,750 | INFO     | ..............................
[2025-07-23 12:16:18] 2025-07-23 10:00:35,750 | INFO     | . Timing measurements:
[2025-07-23 12:16:18] 2025-07-23 10:00:35,750 | INFO     | . get job = 0 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,750 | INFO     | . initial setup = 2 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,750 | INFO     | . payload setup = 10 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,751 | INFO     | . stage-in = 0 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,751 | INFO     | . payload execution = 20475 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,751 | INFO     | . stage-out = 3 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,751 | INFO     | . log creation = 1 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,751 | INFO     | ..............................
[2025-07-23 12:16:18] 2025-07-23 10:00:35,873 | INFO     | 
[2025-07-23 12:16:18] 2025-07-23 10:00:35,873 | INFO     | job summary report
[2025-07-23 12:16:18] 2025-07-23 10:00:35,873 | INFO     | --------------------------------------------------
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | PanDA job id: 6742061098
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | task id: 45697523
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | errors: (none)
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | pilot state: finished 
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | transexitcode: 0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | exeerrorcode: 0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | exeerrordiag: 
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | exitcode: 0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,874 | INFO     | exitmsg: OK
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | cpuconsumptiontime: 77032 s
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | nevents: 400
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | neventsw: 0
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | pid: 4893
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | pgrp: 4893
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | corecount: 8
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | event service: False
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | sizes: {0: 2397381, 1: 2397580, 9: 2397842, 11: 2397870, 20489: 2430526, 20490: 2430525, 20494: 2440079, 20587: 2440217}
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | --------------------------------------------------
[2025-07-23 12:16:18] 2025-07-23 10:00:35,875 | INFO     | 
[2025-07-23 12:16:18] 2025-07-23 10:00:35,876 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-23 12:16:18] 2025-07-23 10:00:36,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 12:16:18] 2025-07-23 10:00:36,357 | INFO     | job 6742061098 has completed (purged errors)
[2025-07-23 12:16:18] 2025-07-23 10:00:36,357 | INFO     | overall cleanup function is called
[2025-07-23 12:16:18] 2025-07-23 10:00:37,366 | INFO     | --- collectZombieJob: --- 10, [4893]
[2025-07-23 12:16:18] 2025-07-23 10:00:37,366 | INFO     | zombie collector waiting for pid 4893
[2025-07-23 12:16:18] 2025-07-23 10:00:37,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 12:16:18] 2025-07-23 10:00:37,366 | INFO     | collected zombie processes
[2025-07-23 12:16:18] 2025-07-23 10:00:37,366 | INFO     | will attempt to kill all subprocesses of pid=4893
[2025-07-23 12:16:18] 2025-07-23 10:00:37,487 | INFO     | process IDs to be killed: [4893] (in reverse order)
[2025-07-23 12:16:18] 2025-07-23 10:00:38,020 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 12:16:18] 2025-07-23 10:00:38,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 12:16:18] 2025-07-23 10:00:38,023 | INFO     | did not find any defunct processes belonging to 4893
[2025-07-23 12:16:18] 2025-07-23 10:00:38,026 | INFO     | did not find any defunct processes belonging to 4893
[2025-07-23 12:16:18] 2025-07-23 10:00:38,026 | INFO     | ready for new job
[2025-07-23 12:16:18] 2025-07-23 10:00:38,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 12:16:18] 2025-07-23 10:00:38,029 | INFO     | ***************************************
[2025-07-23 12:16:18] 2025-07-23 10:00:38,029 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 12:16:18] 2025-07-23 10:00:38,029 | INFO     | ***************************************
[2025-07-23 12:16:18] 2025-07-23 10:00:38,029 | INFO     | 
[2025-07-23 12:16:18] 2025-07-23 10:00:38,030 | INFO     | pilot is running in a VM
[2025-07-23 12:16:18] 2025-07-23 10:00:38,030 | INFO     | architecture information:
[2025-07-23 12:16:18] 2025-07-23 10:00:38,030 | INFO     | executing command: cat /etc/os-release
[2025-07-23 12:16:18] 2025-07-23 10:00:38,197 | INFO     | cat /etc/os-release:
[2025-07-23 12:16:18] NAME="CentOS Linux"
[2025-07-23 12:16:18] VERSION="7 (Core)"
[2025-07-23 12:16:18] ID="centos"
[2025-07-23 12:16:18] ID_LIKE="rhel fedora"
[2025-07-23 12:16:18] VERSION_ID="7"
[2025-07-23 12:16:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 12:16:18] ANSI_COLOR="0;31"
[2025-07-23 12:16:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 12:16:18] HOME_URL="https://www.centos.org/"
[2025-07-23 12:16:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 12:16:18] 
[2025-07-23 12:16:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 12:16:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 12:16:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 12:16:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 12:16:18] 
[2025-07-23 12:16:18] 2025-07-23 10:00:38,197 | INFO     | ***************************************
[2025-07-23 12:16:18] 2025-07-23 10:00:38,701 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-23 12:16:18] 2025-07-23 10:00:38,959 | INFO     | sufficient remaining disk space (497494786048 B)
[2025-07-23 12:16:18] 2025-07-23 10:00:38,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 12:16:18] 2025-07-23 10:00:38,960 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 12:16:18] 2025-07-23 10:00:38,960 | INFO     | update_server=False
[2025-07-23 12:16:18] 2025-07-23 10:00:38,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 12:16:18] 2025-07-23 10:00:38,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:16:18] 2025-07-23 10:00:38,961 | INFO     | aborting loop
[2025-07-23 12:16:18] 2025-07-23 10:00:38,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 12:16:18] 2025-07-23 10:00:39,346 | INFO     | all data control threads have been joined
[2025-07-23 12:16:18] 2025-07-23 10:00:39,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 12:16:18] 2025-07-23 10:00:39,719 | INFO     | all payload control threads have been joined
[2025-07-23 12:16:18] 2025-07-23 10:00:39,965 | INFO     | [job] retrieve thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:39,970 | INFO     | [job] job monitor thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,002 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,102 | INFO     | [payload] failed_post thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,165 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,352 | INFO     | [data] control thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,465 | INFO     | all job control threads have been joined
[2025-07-23 12:16:18] 2025-07-23 10:00:40,605 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,680 | INFO     | [payload] validate_post thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,725 | INFO     | [payload] control thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:40,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:16:18] 2025-07-23 10:00:40,973 | INFO     | [data] copytool_out thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:41,124 | INFO     | [data] copytool_in thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:41,126 | INFO     | [job] validate thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:41,471 | INFO     | [job] control thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:41,893 | INFO     | [job] queue monitor thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:43,373 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 12:16:18] 2025-07-23 10:00:43,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192227604288)>', '<ExcThread(monitor, started 140191918434048)>']
[2025-07-23 12:16:18] 2025-07-23 10:00:48,839 | INFO     | all workflow threads have been joined
[2025-07-23 12:16:18] 2025-07-23 10:00:48,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 12:16:18] 2025-07-23 10:00:48,839 | INFO     | traces error code: 0
[2025-07-23 12:16:18] 2025-07-23 10:00:48,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 12:16:18] 2025-07-23 10:01:08,831 | INFO     | PID=30696 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 12:16:18] 2025-07-23 10:01:08,831 | INFO     | .. there are 9 such processes running
[2025-07-23 12:16:18] 2025-07-23 10:01:08,831 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 12:16:18] 2025-07-23 10:01:08,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 12:16:18] 2025-07-23 10:01:08,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 12:16:18] 2025-07-23 10:01:08,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 12:16:18] 2025-07-23 10:01:08,832 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 12:16:18] 2025-07-23 10:01:08,832 | INFO     | [monitor] control thread has ended
[2025-07-23 12:16:18] 2025-07-23 10:01:09,018 [wrapper] ==== pilot stdout END ====
[2025-07-23 12:16:18] 2025-07-23 10:01:09,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 12:16:18] 2025-07-23 10:01:09,212 [wrapper] pilotpid: 30696
[2025-07-23 12:16:18] 2025-07-23 10:01:09,318 [wrapper] Pilot exit status: 0
[2025-07-23 12:16:18] 2025-07-23 10:01:09,811 [wrapper] pandaids: 6742061098
[2025-07-23 12:16:18] 2025-07-23 10:01:10,668 [wrapper] cleanup supervisor_pilot  4979 30697
[2025-07-23 12:16:18] 2025-07-23 10:01:10,782 [wrapper] Test setup, not cleaning
[2025-07-23 12:16:18] 2025-07-23 10:01:10,869 [wrapper] apfmon messages muted
[2025-07-23 12:16:18] 2025-07-23 10:01:10,963 [wrapper] ==== wrapper stdout END ====
[2025-07-23 12:16:18] 2025-07-23 10:01:11,053 [wrapper] ==== wrapper stderr END ====
[2025-07-23 12:16:18]  *** Error codes and diagnostics ***
[2025-07-23 12:16:18]     "exeErrorCode": 0,
[2025-07-23 12:16:18]     "exeErrorDiag": "",
[2025-07-23 12:16:18]     "pilotErrorCode": 0,
[2025-07-23 12:16:18]     "pilotErrorDiag": "",
[2025-07-23 12:16:18]  *** Listing of results directory ***
[2025-07-23 12:16:18] total 572112
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc    530466 Jul 22 09:08 pilot3.tar.gz
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc      5112 Jul 22 09:15 queuedata.json
[2025-07-23 12:16:18] -rwx------. 1 boinc boinc     36292 Jul 22 09:15 runpilot2-wrapper.sh
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc       100 Jul 23 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 12:16:18] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 05:58 run_atlas
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc       105 Jul 23 05:58 job.xml
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc      6391 Jul 23 05:58 init_data.xml
[2025-07-23 12:16:18] -rw-r--r--. 2 boinc boinc 316202209 Jul 23 05:58 EVNT.45697521._000197.pool.root.1
[2025-07-23 12:16:18] -rw-r--r--. 2 boinc boinc     15095 Jul 23 05:58 start_atlas.sh
[2025-07-23 12:16:18] drwxrwx--x. 2 boinc boinc        68 Jul 23 05:58 shared
[2025-07-23 12:16:18] -rw-r--r--. 2 boinc boinc    542906 Jul 23 05:58 input.tar.gz
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc         0 Jul 23 05:58 boinc_lockfile
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc      2634 Jul 23 06:15 pandaJob.out
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc    977736 Jul 23 06:17 agis_schedconf.cvmfs.json
[2025-07-23 12:16:18] drwx------. 4 boinc boinc      4096 Jul 23 06:17 pilot3
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc 261361479 Jul 23 11:57 HITS.45697523._004956.pool.root.1
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc       531 Jul 23 11:57 boinc_task_state.xml
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc      1019 Jul 23 11:58 memory_monitor_summary.json
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc   1593041 Jul 23 11:59 agis_ddmendpoints.agis.ALL.json
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc    451034 Jul 23 11:59 log.45697523._004956.job.log.tgz.1
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc        95 Jul 23 12:00 pilot_heartbeat.json
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc      7774 Jul 23 12:00 heartbeat.json
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc       890 Jul 23 12:01 pilotlog.txt
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc   1758668 Jul 23 12:01 log.45697523._004956.job.log.1
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc       357 Jul 23 12:01 output.list
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc       620 Jul 23 12:01 runtime_log
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc   2232320 Jul 23 12:01 result.tar.gz
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc      8660 Jul 23 12:01 runtime_log.err
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc       658 Jul 23 12:01 qxPODmEPMy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxmILDm5bc9Pn.diag
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc      8192 Jul 23 12:16 boinc_mmap_file
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc        28 Jul 23 12:16 wrapper_checkpoint.txt
[2025-07-23 12:16:18] -rw-r--r--. 1 boinc boinc     20556 Jul 23 12:16 stderr.txt
[2025-07-23 12:16:18] HITS file was successfully produced:
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc 261361479 Jul 23 11:57 shared/HITS.pool.root.1
[2025-07-23 12:16:18]  *** Contents of shared directory: ***
[2025-07-23 12:16:18] total 566756
[2025-07-23 12:16:18] -rw-r--r--. 2 boinc boinc 316202209 Jul 23 05:58 ATLAS.root_0
[2025-07-23 12:16:18] -rw-r--r--. 2 boinc boinc     15095 Jul 23 05:58 start_atlas.sh
[2025-07-23 12:16:18] -rw-r--r--. 2 boinc boinc    542906 Jul 23 05:58 input.tar.gz
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc 261361479 Jul 23 11:57 HITS.pool.root.1
[2025-07-23 12:16:18] -rw-------. 1 boinc boinc   2232320 Jul 23 12:01 result.tar.gz
12:16:20 (26207): run_atlas exited; CPU time 77287.648928
12:16:20 (26207): called boinc_finish(0)

</stderr_txt>
]]>

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