Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:56:59 (1964499): wrapper (7.7.26015): starting
16:56:59 (1964499): wrapper: running run_atlas (--nthreads 10)
[2025-07-22 16:56:59] Arguments: --nthreads 10
[2025-07-22 16:56:59] Threads: 10
[2025-07-22 16:56:59] Checking for CVMFS
[2025-07-22 16:56:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 16:56:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 16:56:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 16:57:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 16:57:00] 2.13.0.0 1101976 11691 297704 148633 0 526 24334442 32935937 10373 16776704 0 38724867 99.558 51453069 24123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-22 16:57:00] CVMFS is ok
[2025-07-22 16:57:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 16:57:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 16:57:00] Further information can be found at the LHC@home message board.
[2025-07-22 16:57:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 16:57:00] Checking for apptainer binary...
[2025-07-22 16:57:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 16:57:00] Running /usr/bin/apptainer --version
[2025-07-22 16:57:00] apptainer version 1.4.1-1.el9
[2025-07-22 16:57:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 16:57:00] c-5-2.aglt2.org
[2025-07-22 16:57:00] apptainer works
[2025-07-22 16:57:00] Set ATHENA_PROC_NUMBER=10
[2025-07-22 16:57:00] Set ATHENA_CORE_NUMBER=10
[2025-07-22 16:57:00] Starting ATLAS job with PandaID=6741783075
[2025-07-22 16:57:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 22:39:54]  *** The last 200 lines of the pilot log: ***
[2025-07-22 22:39:54] 2025-07-23 02:39:17,475 | INFO     | PID=1968193 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-22 22:39:54] 2025-07-23 02:39:17,475 | INFO     | .. there are 17 such processes running
[2025-07-22 22:39:54] 2025-07-23 02:39:18,246 | INFO     | monitor loop #1256: job 0:6741783075 is in state 'finished'
[2025-07-22 22:39:54] 2025-07-23 02:39:18,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,502 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 22:39:54] 2025-07-23 02:39:20,520 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2780.1586750000006
[2025-07-22 22:39:54] 2025-07-23 02:39:20,527 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741783075/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,528 | INFO     | extracted standard info from prmon json
[2025-07-22 22:39:54] 2025-07-23 02:39:20,528 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 22:39:54] 2025-07-23 02:39:20,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 22:39:54] 2025-07-23 02:39:20,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 22:39:54] 2025-07-23 02:39:20,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 22:39:54] 2025-07-23 02:39:20,535 | INFO     | fitting pss+swap vs Time
[2025-07-22 22:39:54] 2025-07-23 02:39:20,536 | INFO     | sum of square deviations: 11762521492.809452
[2025-07-22 22:39:54] 2025-07-23 02:39:20,539 | INFO     | sum of deviations: 56926165155.30954
[2025-07-22 22:39:54] 2025-07-23 02:39:20,539 | INFO     | mean x: 1753228072.7738094
[2025-07-22 22:39:54] 2025-07-23 02:39:20,539 | INFO     | mean y: 2279213.648809524
[2025-07-22 22:39:54] 2025-07-23 02:39:20,540 | INFO     | -- intersect: -8482683035.870434
[2025-07-22 22:39:54] 2025-07-23 02:39:20,540 | INFO     | intersect: -8482683035.870434
[2025-07-22 22:39:54] 2025-07-23 02:39:20,540 | INFO     | chi2: 1.6014637065377262
[2025-07-22 22:39:54] 2025-07-23 02:39:20,541 | INFO     | sum of square deviations: 11245218922.42891
[2025-07-22 22:39:54] 2025-07-23 02:39:20,544 | INFO     | sum of deviations: 58250459638.47748
[2025-07-22 22:39:54] 2025-07-23 02:39:20,544 | INFO     | mean x: 1753227920.2779455
[2025-07-22 22:39:54] 2025-07-23 02:39:20,544 | INFO     | mean y: 2279608.407854985
[2025-07-22 22:39:54] 2025-07-23 02:39:20,544 | INFO     | -- intersect: -9079476194.808071
[2025-07-22 22:39:54] 2025-07-23 02:39:20,544 | INFO     | intersect: -9079476194.808071
[2025-07-22 22:39:54] 2025-07-23 02:39:20,545 | INFO     | chi2: 1.5942770871631229
[2025-07-22 22:39:54] 2025-07-23 02:39:20,545 | INFO     | current chi2=1.5942770871631229 (change=0.4487531840568752 %)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,545 | INFO     | right removable region: 330
[2025-07-22 22:39:54] 2025-07-23 02:39:20,546 | INFO     | sum of square deviations: 11245162802.42891
[2025-07-22 22:39:54] 2025-07-23 02:39:20,548 | INFO     | sum of deviations: 10379798134.027195
[2025-07-22 22:39:54] 2025-07-23 02:39:20,549 | INFO     | mean x: 1753228225.2779455
[2025-07-22 22:39:54] 2025-07-23 02:39:20,549 | INFO     | mean y: 2292850.510574018
[2025-07-22 22:39:54] 2025-07-23 02:39:20,549 | INFO     | -- intersect: -1616016762.342083
[2025-07-22 22:39:54] 2025-07-23 02:39:20,549 | INFO     | intersect: -1616016762.342083
[2025-07-22 22:39:54] 2025-07-23 02:39:20,550 | INFO     | chi2: 0.27626660454380564
[2025-07-22 22:39:54] 2025-07-23 02:39:20,550 | INFO     | current chi2=0.27626660454380564 (change=82.74911860843363 %)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,550 | INFO     | sum of square deviations: 10743199749.536827
[2025-07-22 22:39:54] 2025-07-23 02:39:20,553 | INFO     | sum of deviations: 11731356852.60737
[2025-07-22 22:39:54] 2025-07-23 02:39:20,553 | INFO     | mean x: 1753228377.7822087
[2025-07-22 22:39:54] 2025-07-23 02:39:20,553 | INFO     | mean y: 2292420.656441718
[2025-07-22 22:39:54] 2025-07-23 02:39:20,553 | INFO     | -- intersect: -1912197510.033692
[2025-07-22 22:39:54] 2025-07-23 02:39:20,554 | INFO     | intersect: -1912197510.033692
[2025-07-22 22:39:54] 2025-07-23 02:39:20,554 | INFO     | chi2: 0.24814575144528417
[2025-07-22 22:39:54] 2025-07-23 02:39:20,554 | INFO     | current chi2=0.24814575144528417 (change=10.178882512765869 %)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,554 | INFO     | left removable region: 20
[2025-07-22 22:39:54] 2025-07-23 02:39:20,555 | INFO     | sum of square deviations: 9237774037.37098
[2025-07-22 22:39:54] 2025-07-23 02:39:20,557 | INFO     | sum of deviations: 23050227719.000023
[2025-07-22 22:39:54] 2025-07-23 02:39:20,558 | INFO     | mean x: 1753228499.7903225
[2025-07-22 22:39:54] 2025-07-23 02:39:20,558 | INFO     | mean y: 2289395.4
[2025-07-22 22:39:54] 2025-07-23 02:39:20,558 | INFO     | -- intersect: -4372391777.804887
[2025-07-22 22:39:54] 2025-07-23 02:39:20,558 | INFO     | intersect: -4372391777.804887
[2025-07-22 22:39:54] 2025-07-23 02:39:20,558 | INFO     | chi2: 0.1519193450472663
[2025-07-22 22:39:54] 2025-07-23 02:39:20,559 | INFO     | -- intersect: -4372391777.804887
[2025-07-22 22:39:54] 2025-07-23 02:39:20,559 | INFO     | current memory leak: 2.50 B/s (using 310 data points, chi2=0.15)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,559 | INFO     | could have reported an average CPU frequency of 2638 MHz (15 samples)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | ..............................
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . Timing measurements:
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . get job = 0 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . initial setup = 2 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . payload setup = 5 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . stage-in = 0 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . payload execution = 20494 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . stage-out = 3 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,560 | INFO     | . log creation = 0 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,561 | INFO     | ..............................
[2025-07-22 22:39:54] 2025-07-23 02:39:20,669 | INFO     | 
[2025-07-22 22:39:54] 2025-07-23 02:39:20,669 | INFO     | job summary report
[2025-07-22 22:39:54] 2025-07-23 02:39:20,669 | INFO     | --------------------------------------------------
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | PanDA job id: 6741783075
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | task id: 45697490
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | errors: (none)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | pilot state: finished 
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | transexitcode: 0
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | exeerrorcode: 0
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | exeerrordiag: 
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | exitcode: 0
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | exitmsg: OK
[2025-07-22 22:39:54] 2025-07-23 02:39:20,670 | INFO     | cpuconsumptiontime: 74584 s
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | nevents: 400
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | neventsw: 0
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | pid: 1975502
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | pgrp: 1975502
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | corecount: 10
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | event service: False
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | sizes: {0: 2397327, 1: 2397526, 4: 2397788, 12: 2397816, 20504: 2431270, 20508: 2440268, 20511: 2440452, 20515: 2440646}
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | --------------------------------------------------
[2025-07-22 22:39:54] 2025-07-23 02:39:20,671 | INFO     | 
[2025-07-22 22:39:54] 2025-07-23 02:39:20,672 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 22:39:54] 2025-07-23 02:39:20,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 22:39:54] 2025-07-23 02:39:20,695 | INFO     | job 6741783075 has completed (purged errors)
[2025-07-22 22:39:54] 2025-07-23 02:39:20,695 | INFO     | overall cleanup function is called
[2025-07-22 22:39:54] 2025-07-23 02:39:21,703 | INFO     | --- collectZombieJob: --- 10, [1975502]
[2025-07-22 22:39:54] 2025-07-23 02:39:21,703 | INFO     | zombie collector waiting for pid 1975502
[2025-07-22 22:39:54] 2025-07-23 02:39:21,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 22:39:54] 2025-07-23 02:39:21,703 | INFO     | collected zombie processes
[2025-07-22 22:39:54] 2025-07-23 02:39:21,704 | INFO     | will attempt to kill all subprocesses of pid=1975502
[2025-07-22 22:39:54] 2025-07-23 02:39:21,972 | INFO     | process IDs to be killed: [1975502] (in reverse order)
[2025-07-22 22:39:54] 2025-07-23 02:39:22,053 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 22:39:54] 2025-07-23 02:39:22,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 22:39:54] 2025-07-23 02:39:22,060 | INFO     | did not find any defunct processes belonging to 1975502
[2025-07-22 22:39:54] 2025-07-23 02:39:22,067 | INFO     | did not find any defunct processes belonging to 1975502
[2025-07-22 22:39:54] 2025-07-23 02:39:22,068 | INFO     | ready for new job
[2025-07-22 22:39:54] 2025-07-23 02:39:22,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 22:39:54] 2025-07-23 02:39:22,069 | INFO     | ***************************************
[2025-07-22 22:39:54] 2025-07-23 02:39:22,070 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 22:39:54] 2025-07-23 02:39:22,070 | INFO     | ***************************************
[2025-07-22 22:39:54] 2025-07-23 02:39:22,070 | INFO     | 
[2025-07-22 22:39:54] 2025-07-23 02:39:22,085 | INFO     | architecture information:
[2025-07-22 22:39:54] 2025-07-23 02:39:22,085 | INFO     | executing command: cat /etc/os-release
[2025-07-22 22:39:54] 2025-07-23 02:39:22,097 | INFO     | cat /etc/os-release:
[2025-07-22 22:39:54] NAME="CentOS Linux"
[2025-07-22 22:39:54] VERSION="7 (Core)"
[2025-07-22 22:39:54] ID="centos"
[2025-07-22 22:39:54] ID_LIKE="rhel fedora"
[2025-07-22 22:39:54] VERSION_ID="7"
[2025-07-22 22:39:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 22:39:54] ANSI_COLOR="0;31"
[2025-07-22 22:39:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 22:39:54] HOME_URL="https://www.centos.org/"
[2025-07-22 22:39:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 22:39:54] 
[2025-07-22 22:39:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 22:39:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 22:39:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 22:39:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 22:39:54] 
[2025-07-22 22:39:54] 2025-07-23 02:39:22,097 | INFO     | ***************************************
[2025-07-22 22:39:54] 2025-07-23 02:39:22,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 22:39:54] 2025-07-23 02:39:22,615 | INFO     | sufficient remaining disk space (76206309376 B)
[2025-07-22 22:39:54] 2025-07-23 02:39:22,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 22:39:54] 2025-07-23 02:39:22,616 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 22:39:54] 2025-07-23 02:39:22,616 | INFO     | update_server=False
[2025-07-22 22:39:54] 2025-07-23 02:39:22,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 22:39:54] 2025-07-23 02:39:22,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 22:39:54] 2025-07-23 02:39:22,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 22:39:54] 2025-07-23 02:39:22,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 22:39:54] 2025-07-23 02:39:22,617 | INFO     | aborting loop
[2025-07-22 22:39:54] 2025-07-23 02:39:22,726 | INFO     | all payload control threads have been joined
[2025-07-22 22:39:54] 2025-07-23 02:39:22,826 | INFO     | all job control threads have been joined
[2025-07-22 22:39:54] 2025-07-23 02:39:23,128 | INFO     | all data control threads have been joined
[2025-07-22 22:39:54] 2025-07-23 02:39:23,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 22:39:54] 2025-07-23 02:39:23,618 | INFO     | [job] retrieve thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:23,622 | INFO     | [job] job monitor thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:23,622 | INFO     | [job] queue monitor thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:23,731 | INFO     | [payload] control thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:23,771 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:23,831 | INFO     | [job] control thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,133 | INFO     | [data] control thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,191 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,638 | INFO     | [payload] failed_post thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,774 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,787 | INFO     | [payload] validate_post thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,795 | INFO     | [job] validate thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:24,867 | INFO     | [data] copytool_in thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:25,423 | INFO     | [data] copytool_out thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:26,623 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 22:39:54] 2025-07-23 02:39:27,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140580762343232)>', '<ExcThread(monitor, started 140580050958080)>']
[2025-07-22 22:39:54] 2025-07-23 02:39:32,385 | INFO     | all workflow threads have been joined
[2025-07-22 22:39:54] 2025-07-23 02:39:32,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 22:39:54] 2025-07-23 02:39:32,386 | INFO     | traces error code: 0
[2025-07-22 22:39:54] 2025-07-23 02:39:32,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 22:39:54] 2025-07-23 02:39:53,907 | INFO     | PID=1968193 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 22:39:54] 2025-07-23 02:39:53,908 | INFO     | .. there are 17 such processes running
[2025-07-22 22:39:54] 2025-07-23 02:39:53,909 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 22:39:54] 2025-07-23 02:39:53,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 22:39:54] 2025-07-23 02:39:53,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 22:39:54] 2025-07-23 02:39:53,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 22:39:54] 2025-07-23 02:39:53,909 | INFO     | [monitor] control thread has ended
[2025-07-22 22:39:54] 2025-07-23 02:39:54,070 [wrapper] ==== pilot stdout END ====
[2025-07-22 22:39:54] 2025-07-23 02:39:54,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 22:39:54] 2025-07-23 02:39:54,075 [wrapper] pilotpid: 1968193
[2025-07-22 22:39:54] 2025-07-23 02:39:54,078 [wrapper] Pilot exit status: 0
[2025-07-22 22:39:54] 2025-07-23 02:39:54,088 [wrapper] pandaids: 6741783075
[2025-07-22 22:39:54] 2025-07-23 02:39:54,145 [wrapper] cleanup supervisor_pilot 2552548 1968194
[2025-07-22 22:39:54] 2025-07-23 02:39:54,148 [wrapper] Test setup, not cleaning
[2025-07-22 22:39:54] 2025-07-23 02:39:54,151 [wrapper] apfmon messages muted
[2025-07-22 22:39:54] 2025-07-23 02:39:54,153 [wrapper] ==== wrapper stdout END ====
[2025-07-22 22:39:54] 2025-07-23 02:39:54,156 [wrapper] ==== wrapper stderr END ====
[2025-07-22 22:39:54]  *** Error codes and diagnostics ***
[2025-07-22 22:39:54]     "exeErrorCode": 0,
[2025-07-22 22:39:54]     "exeErrorDiag": "",
[2025-07-22 22:39:54]     "pilotErrorCode": 0,
[2025-07-22 22:39:54]     "pilotErrorDiag": "",
[2025-07-22 22:39:54]  *** Listing of results directory ***
[2025-07-22 22:39:54] total 642092
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 09:16 pilot3.tar.gz
[2025-07-22 22:39:54] -rwx------. 1 boincer umatlas     36292 Jul 22 10:00 runpilot2-wrapper.sh
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 10:00 queuedata.json
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas       100 Jul 22 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 22:39:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 16:56 run_atlas
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas       105 Jul 22 16:56 job.xml
[2025-07-22 22:39:54] -rw-r--r--. 2 boincer umatlas 342880672 Jul 22 16:56 EVNT.45697488._000038.pool.root.1
[2025-07-22 22:39:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 16:56 start_atlas.sh
[2025-07-22 22:39:54] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 16:56 shared
[2025-07-22 22:39:54] -rw-r--r--. 2 boincer umatlas    542898 Jul 22 16:56 input.tar.gz
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas         0 Jul 22 16:56 boinc_lockfile
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas      2587 Jul 22 16:57 pandaJob.out
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas    977720 Jul 22 16:57 agis_schedconf.cvmfs.json
[2025-07-22 22:39:54] drwx------. 4 boincer umatlas      4096 Jul 22 16:57 pilot3
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas      6656 Jul 22 22:31 init_data.xml
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas 306428152 Jul 22 22:38 HITS.45697490._000817.pool.root.1
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas       532 Jul 22 22:38 boinc_task_state.xml
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas      1056 Jul 22 22:39 memory_monitor_summary.json
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas   1593031 Jul 22 22:39 agis_ddmendpoints.agis.ALL.json
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas    488615 Jul 22 22:39 log.45697490._000817.job.log.tgz.1
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas        95 Jul 22 22:39 pilot_heartbeat.json
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas      7817 Jul 22 22:39 heartbeat.json
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas        28 Jul 22 22:39 wrapper_checkpoint.txt
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 22:39 boinc_mmap_file
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas       823 Jul 22 22:39 pilotlog.txt
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas   1670405 Jul 22 22:39 log.45697490._000817.job.log.1
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas       357 Jul 22 22:39 output.list
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas       620 Jul 22 22:39 runtime_log
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas   2181120 Jul 22 22:39 result.tar.gz
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas      8648 Jul 22 22:39 runtime_log.err
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas       655 Jul 22 22:39 lopNDmtiSy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8VJLDmKzcznm.diag
[2025-07-22 22:39:54] -rw-r--r--. 1 boincer umatlas     21313 Jul 22 22:39 stderr.txt
[2025-07-22 22:39:54] HITS file was successfully produced:
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas 306428152 Jul 22 22:38 shared/HITS.pool.root.1
[2025-07-22 22:39:54]  *** Contents of shared directory: ***
[2025-07-22 22:39:54] total 636780
[2025-07-22 22:39:54] -rw-r--r--. 2 boincer umatlas 342880672 Jul 22 16:56 ATLAS.root_0
[2025-07-22 22:39:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 16:56 start_atlas.sh
[2025-07-22 22:39:54] -rw-r--r--. 2 boincer umatlas    542898 Jul 22 16:56 input.tar.gz
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas 306428152 Jul 22 22:38 HITS.pool.root.1
[2025-07-22 22:39:54] -rw-------. 1 boincer umatlas   2181120 Jul 22 22:39 result.tar.gz
22:39:56 (1964499): run_atlas exited; CPU time 75211.691403
22:39:56 (1964499): called boinc_finish(0)

</stderr_txt>
]]>

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