Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:37:18 (3082605): wrapper (7.7.26015): starting
04:37:18 (3082605): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 04:37:18] Arguments: --nthreads 12
[2025-07-23 04:37:18] Threads: 12
[2025-07-23 04:37:18] Checking for CVMFS
[2025-07-23 04:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 04:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 04:37:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 04:37:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 04:37:19] 2.13.1.0 8846 26521 138120 148642 0 70 33101189 46080000 8888 130560 0 235478845 99.903 67642421 27037 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 04:37:19] CVMFS is ok
[2025-07-23 04:37:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 04:37:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 04:37:19] Further information can be found at the LHC@home message board.
[2025-07-23 04:37:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 04:37:19] Checking for apptainer binary...
[2025-07-23 04:37:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 04:37:19] Running /usr/bin/apptainer --version
[2025-07-23 04:37:19] apptainer version 1.4.1-1.el9
[2025-07-23 04:37:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 04:37:19] mff2101.farm.particle.cz
[2025-07-23 04:37:19] apptainer works
[2025-07-23 04:37:19] Set ATHENA_PROC_NUMBER=12
[2025-07-23 04:37:19] Set ATHENA_CORE_NUMBER=12
[2025-07-23 04:37:19] Starting ATLAS job with PandaID=6741762084
[2025-07-23 04:37:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 06:02:13]  *** The last 200 lines of the pilot log: ***
[2025-07-23 06:02:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 06:02:13]  replicas=None
[2025-07-23 06:02:13]  scope=mc23_13p6TeV
[2025-07-23 06:02:13]  status=None
[2025-07-23 06:02:13]  status_code=0
[2025-07-23 06:02:13]  storage_token=
[2025-07-23 06:02:13]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6741762084/log.45697472._002191.job.log.tgz.1
[2025-07-23 06:02:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/17/log.45697472._002191.job.log.tgz.1
[2025-07-23 06:02:13]  workdir=None
[2025-07-23 06:02:13] ]
[2025-07-23 06:02:13] 2025-07-23 04:01:33,423 | INFO     | transferring file log.45697472._002191.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6741762084/log.45697472._002191.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 06:02:13] 2025-07-23 04:01:33,424 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6741762084/log.45697472._002191.job.log.tgz.1 /scratch/.boinc/slots/1/log.45697472._002191.j
[2025-07-23 06:02:13] 2025-07-23 04:01:33,446 | INFO     | adding to output.list: log.45697472._002191.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/17/log.45697472._002191.job.log.tg
[2025-07-23 06:02:13] 2025-07-23 04:01:33,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 06:02:13] 2025-07-23 04:01:33,447 | INFO     | summary of transferred files:
[2025-07-23 06:02:13] 2025-07-23 04:01:33,447 | INFO     |  -- lfn=log.45697472._002191.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 06:02:13] 2025-07-23 04:01:33,448 | INFO     | stage-out finished correctly
[2025-07-23 06:02:13] 2025-07-23 04:01:33,842 | INFO     | number of running child processes to parent process 3093695: 1
[2025-07-23 06:02:13] 2025-07-23 04:01:33,842 | INFO     | maximum number of monitored processes: 6
[2025-07-23 06:02:13] 2025-07-23 04:01:34,904 | INFO     | PID=3086578 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 06:02:13] 2025-07-23 04:01:34,904 | INFO     | .. there are 13 such processes running
[2025-07-23 06:02:13] 2025-07-23 04:01:35,911 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 06:02:13] 2025-07-23 04:01:36,031 | INFO     | job 6741762084 has state=finished
[2025-07-23 06:02:13] 2025-07-23 04:01:36,031 | INFO     | preparing for final server update for job 6741762084 in state='finished'
[2025-07-23 06:02:13] 2025-07-23 04:01:36,031 | INFO     | this job has now completed (state=finished)
[2025-07-23 06:02:13] 2025-07-23 04:01:36,032 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 06:02:13] 2025-07-23 04:01:36,032 | INFO     | log transfer has been attempted: DONE
[2025-07-23 06:02:13] 2025-07-23 04:01:36,032 | INFO     | job 6741762084 has finished - writing final server update
[2025-07-23 06:02:13] 2025-07-23 04:01:36,032 | INFO     | total number of processed events: 400 (read)
[2025-07-23 06:02:13] 2025-07-23 04:01:36,033 | INFO     | executing command: lscpu
[2025-07-23 06:02:13] 2025-07-23 04:01:36,111 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 06:02:13] 2025-07-23 04:01:36,350 | INFO     | monitor loop #363: job 0:6741762084 is in state 'finished'
[2025-07-23 06:02:13] 2025-07-23 04:01:36,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 06:02:13] 2025-07-23 04:01:38,855 | INFO     | monitor loop #364: job 0:6741762084 is in state 'finished'
[2025-07-23 06:02:13] 2025-07-23 04:01:38,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,361 | INFO     | monitor loop #365: job 0:6741762084 is in state 'finished'
[2025-07-23 06:02:13] 2025-07-23 04:01:41,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,624 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 06:02:13] 2025-07-23 04:01:41,639 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2768.9021770833338
[2025-07-23 06:02:13] 2025-07-23 04:01:41,657 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6741762084/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,658 | INFO     | extracted standard info from prmon json
[2025-07-23 06:02:13] 2025-07-23 04:01:41,658 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 06:02:13] 2025-07-23 04:01:41,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 06:02:13] 2025-07-23 04:01:41,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 06:02:13] 2025-07-23 04:01:41,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 06:02:13] 2025-07-23 04:01:41,661 | INFO     | fitting pss+swap vs Time
[2025-07-23 06:02:13] 2025-07-23 04:01:41,661 | INFO     | sum of square deviations: 136095575.0
[2025-07-23 06:02:13] 2025-07-23 04:01:41,661 | INFO     | sum of deviations: -2993197867.5
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | mean x: 1753240875.5
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | mean y: 2802719.9342105263
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | -- intersect: 38562446189.31544
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | intersect: 38562446189.31544
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | chi2: 0.019332821986386153
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | -- intersect: 38562446189.31544
[2025-07-23 06:02:13] 2025-07-23 04:01:41,662 | INFO     | current memory leak: -21.99 B/s (using 76 data points, chi2=0.02)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | could have reported an average CPU frequency of 2746 MHz (6 samples)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | ..............................
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . Timing measurements:
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . get job = 0 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . initial setup = 1 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . payload setup = 7 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . stage-in = 0 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . payload execution = 5012 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,663 | INFO     | . stage-out = 1 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,664 | INFO     | . log creation = 0 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,664 | INFO     | ..............................
[2025-07-23 06:02:13] 2025-07-23 04:01:41,762 | INFO     | 
[2025-07-23 06:02:13] 2025-07-23 04:01:41,762 | INFO     | job summary report
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | --------------------------------------------------
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | PanDA job id: 6741762084
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | task id: 45697472
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | errors: (none)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | pilot state: finished 
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | transexitcode: 0
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | exeerrorcode: 0
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | exeerrordiag: 
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | exitcode: 0
[2025-07-23 06:02:13] 2025-07-23 04:01:41,763 | INFO     | exitmsg: OK
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | cpuconsumptiontime: 54216 s
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | nevents: 400
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | neventsw: 0
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | pid: 3093695
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | pgrp: 3093695
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | corecount: 12
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | event service: False
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | sizes: {0: 2396704, 1: 2397561, 7: 2397823, 12: 2397851, 5024: 2424085, 5026: 2433085, 5028: 2433269, 5034: 2433463}
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | --------------------------------------------------
[2025-07-23 06:02:13] 2025-07-23 04:01:41,764 | INFO     | 
[2025-07-23 06:02:13] 2025-07-23 04:01:41,765 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 06:02:13] 2025-07-23 04:01:41,793 | INFO     | job 6741762084 has completed (purged errors)
[2025-07-23 06:02:13] 2025-07-23 04:01:41,793 | INFO     | overall cleanup function is called
[2025-07-23 06:02:13] 2025-07-23 04:01:42,802 | INFO     | --- collectZombieJob: --- 10, [3093695]
[2025-07-23 06:02:13] 2025-07-23 04:01:42,802 | INFO     | zombie collector waiting for pid 3093695
[2025-07-23 06:02:13] 2025-07-23 04:01:42,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 06:02:13] 2025-07-23 04:01:42,802 | INFO     | collected zombie processes
[2025-07-23 06:02:13] 2025-07-23 04:01:42,802 | INFO     | will attempt to kill all subprocesses of pid=3093695
[2025-07-23 06:02:13] 2025-07-23 04:01:43,198 | INFO     | process IDs to be killed: [3093695] (in reverse order)
[2025-07-23 06:02:13] 2025-07-23 04:01:43,322 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 06:02:13] 2025-07-23 04:01:43,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 06:02:13] 2025-07-23 04:01:43,337 | INFO     | did not find any defunct processes belonging to 3093695
[2025-07-23 06:02:13] 2025-07-23 04:01:43,351 | INFO     | did not find any defunct processes belonging to 3093695
[2025-07-23 06:02:13] 2025-07-23 04:01:43,351 | INFO     | ready for new job
[2025-07-23 06:02:13] 2025-07-23 04:01:43,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 06:02:13] 2025-07-23 04:01:43,353 | INFO     | ***************************************
[2025-07-23 06:02:13] 2025-07-23 04:01:43,353 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 06:02:13] 2025-07-23 04:01:43,353 | INFO     | ***************************************
[2025-07-23 06:02:13] 2025-07-23 04:01:43,353 | INFO     | 
[2025-07-23 06:02:13] 2025-07-23 04:01:43,360 | INFO     | architecture information:
[2025-07-23 06:02:13] 2025-07-23 04:01:43,360 | INFO     | executing command: cat /etc/os-release
[2025-07-23 06:02:13] 2025-07-23 04:01:43,389 | INFO     | cat /etc/os-release:
[2025-07-23 06:02:13] NAME="CentOS Linux"
[2025-07-23 06:02:13] VERSION="7 (Core)"
[2025-07-23 06:02:13] ID="centos"
[2025-07-23 06:02:13] ID_LIKE="rhel fedora"
[2025-07-23 06:02:13] VERSION_ID="7"
[2025-07-23 06:02:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 06:02:13] ANSI_COLOR="0;31"
[2025-07-23 06:02:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 06:02:13] HOME_URL="https://www.centos.org/"
[2025-07-23 06:02:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 06:02:13] 
[2025-07-23 06:02:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 06:02:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 06:02:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 06:02:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 06:02:13] 
[2025-07-23 06:02:13] 2025-07-23 04:01:43,390 | INFO     | ***************************************
[2025-07-23 06:02:13] 2025-07-23 04:01:43,892 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-07-23 06:02:13] 2025-07-23 04:01:43,912 | INFO     | sufficient remaining disk space (1674551754752 B)
[2025-07-23 06:02:13] 2025-07-23 04:01:43,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 06:02:13] 2025-07-23 04:01:43,913 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 06:02:13] 2025-07-23 04:01:43,913 | INFO     | update_server=False
[2025-07-23 06:02:13] 2025-07-23 04:01:43,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 06:02:13] 2025-07-23 04:01:44,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 06:02:13] 2025-07-23 04:01:44,580 | INFO     | all data control threads have been joined
[2025-07-23 06:02:13] 2025-07-23 04:01:44,787 | INFO     | all payload control threads have been joined
[2025-07-23 06:02:13] 2025-07-23 04:01:44,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 06:02:13] 2025-07-23 04:01:44,873 | INFO     | aborting loop
[2025-07-23 06:02:13] 2025-07-23 04:01:44,916 | INFO     | [job] retrieve thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,151 | INFO     | [data] copytool_in thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,157 | INFO     | [job] validate thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,164 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,356 | INFO     | [payload] failed_post thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,551 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,579 | INFO     | all job control threads have been joined
[2025-07-23 06:02:13] 2025-07-23 04:01:45,583 | INFO     | [data] control thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,791 | INFO     | [payload] control thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,878 | INFO     | [job] job monitor thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:45,942 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:46,066 | INFO     | [data] copytool_out thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:46,078 | INFO     | [payload] validate_post thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:46,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 06:02:13] 2025-07-23 04:01:46,586 | INFO     | [job] control thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:46,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 06:02:13] 2025-07-23 04:01:47,775 | INFO     | [job] queue monitor thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:50,525 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 06:02:13] 2025-07-23 04:01:51,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685242943296)>', '<ExcThread(monitor, started 139684617385728)>']
[2025-07-23 06:02:13] 2025-07-23 04:01:56,811 | INFO     | all workflow threads have been joined
[2025-07-23 06:02:13] 2025-07-23 04:01:56,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 06:02:13] 2025-07-23 04:01:56,812 | INFO     | traces error code: 0
[2025-07-23 06:02:13] 2025-07-23 04:01:56,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 06:02:13] 2025-07-23 04:02:13,381 | INFO     | PID=3086578 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 06:02:13] 2025-07-23 04:02:13,382 | INFO     | .. there are 13 such processes running
[2025-07-23 06:02:13] 2025-07-23 04:02:13,382 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 06:02:13] 2025-07-23 04:02:13,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 06:02:13] 2025-07-23 04:02:13,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 06:02:13] 2025-07-23 04:02:13,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 06:02:13] 2025-07-23 04:02:13,383 | INFO     | [monitor] control thread has ended
[2025-07-23 06:02:13] 2025-07-23 04:02:13,520 [wrapper] ==== pilot stdout END ====
[2025-07-23 06:02:13] 2025-07-23 04:02:13,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 06:02:13] 2025-07-23 04:02:13,528 [wrapper] pilotpid: 3086578
[2025-07-23 06:02:13] 2025-07-23 04:02:13,532 [wrapper] Pilot exit status: 0
[2025-07-23 06:02:13] 2025-07-23 04:02:13,546 [wrapper] pandaids: 6741762084
[2025-07-23 06:02:13] 2025-07-23 04:02:13,633 [wrapper] cleanup supervisor_pilot 3308843 3086579
[2025-07-23 06:02:13] 2025-07-23 04:02:13,638 [wrapper] Test setup, not cleaning
[2025-07-23 06:02:13] 2025-07-23 04:02:13,641 [wrapper] apfmon messages muted
[2025-07-23 06:02:13] 2025-07-23 04:02:13,646 [wrapper] ==== wrapper stdout END ====
[2025-07-23 06:02:13] 2025-07-23 04:02:13,649 [wrapper] ==== wrapper stderr END ====
[2025-07-23 06:02:13]  *** Error codes and diagnostics ***
[2025-07-23 06:02:13]     "exeErrorCode": 0,
[2025-07-23 06:02:13]     "exeErrorDiag": "",
[2025-07-23 06:02:13]     "pilotErrorCode": 0,
[2025-07-23 06:02:13]     "pilotErrorDiag": "",
[2025-07-23 06:02:13]  *** Listing of results directory ***
[2025-07-23 06:02:13] total 606100
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc    530466 Jul 22 11:10 pilot3.tar.gz
[2025-07-23 06:02:13] -rwx------ 1 boinc boinc     36292 Jul 22 11:28 runpilot2-wrapper.sh
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc      5112 Jul 22 11:28 queuedata.json
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc       100 Jul 23 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 06:02:13] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 04:37 run_atlas
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc       105 Jul 23 04:37 job.xml
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc      6664 Jul 23 04:37 init_data.xml
[2025-07-23 06:02:13] -rw-r--r-- 2 boinc boinc 329813479 Jul 23 04:37 EVNT.45697470._000115.pool.root.1
[2025-07-23 06:02:13] -rw-r--r-- 2 boinc boinc     15095 Jul 23 04:37 start_atlas.sh
[2025-07-23 06:02:13] drwxrwx--x 2 boinc boinc      4096 Jul 23 04:37 shared
[2025-07-23 06:02:13] -rw-r--r-- 2 boinc boinc    542899 Jul 23 04:37 input.tar.gz
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc         0 Jul 23 04:37 boinc_lockfile
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc      2611 Jul 23 04:37 pandaJob.out
[2025-07-23 06:02:13] -rw------- 1 boinc boinc    977736 Jul 23 04:37 agis_schedconf.cvmfs.json
[2025-07-23 06:02:13] -rw------- 1 boinc boinc   1593031 Jul 23 04:37 agis_ddmendpoints.agis.ALL.json
[2025-07-23 06:02:13] drwx------ 4 boinc boinc      4096 Jul 23 04:37 pilot3
[2025-07-23 06:02:13] -rw------- 1 boinc boinc 285245368 Jul 23 06:00 HITS.45697472._002191.pool.root.1
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc       530 Jul 23 06:00 boinc_task_state.xml
[2025-07-23 06:02:13] -rw------- 1 boinc boinc      1035 Jul 23 06:01 memory_monitor_summary.json
[2025-07-23 06:02:13] -rw------- 1 boinc boinc    372021 Jul 23 06:01 log.45697472._002191.job.log.tgz.1
[2025-07-23 06:02:13] -rw------- 1 boinc boinc      7770 Jul 23 06:01 heartbeat.json
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc      8192 Jul 23 06:02 boinc_mmap_file
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc        27 Jul 23 06:02 wrapper_checkpoint.txt
[2025-07-23 06:02:13] -rw------- 1 boinc boinc        95 Jul 23 06:02 pilot_heartbeat.json
[2025-07-23 06:02:13] -rw------- 1 boinc boinc       823 Jul 23 06:02 pilotlog.txt
[2025-07-23 06:02:13] -rw------- 1 boinc boinc    486838 Jul 23 06:02 log.45697472._002191.job.log.1
[2025-07-23 06:02:13] -rw------- 1 boinc boinc       357 Jul 23 06:02 output.list
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc       620 Jul 23 06:02 runtime_log
[2025-07-23 06:02:13] -rw------- 1 boinc boinc    880640 Jul 23 06:02 result.tar.gz
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc      8721 Jul 23 06:02 runtime_log.err
[2025-07-23 06:02:13] -rw------- 1 boinc boinc       664 Jul 23 06:02 5CzLDm4TOy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFmuKDm3XQ2Ln.diag
[2025-07-23 06:02:13] -rw-r--r-- 1 boinc boinc     22003 Jul 23 06:02 stderr.txt
[2025-07-23 06:02:13] HITS file was successfully produced:
[2025-07-23 06:02:13] -rw------- 1 boinc boinc 285245368 Jul 23 06:00 shared/HITS.pool.root.1
[2025-07-23 06:02:13]  *** Contents of shared directory: ***
[2025-07-23 06:02:13] total 602060
[2025-07-23 06:02:13] -rw-r--r-- 2 boinc boinc 329813479 Jul 23 04:37 ATLAS.root_0
[2025-07-23 06:02:13] -rw-r--r-- 2 boinc boinc     15095 Jul 23 04:37 start_atlas.sh
[2025-07-23 06:02:13] -rw-r--r-- 2 boinc boinc    542899 Jul 23 04:37 input.tar.gz
[2025-07-23 06:02:13] -rw------- 1 boinc boinc 285245368 Jul 23 06:00 HITS.pool.root.1
[2025-07-23 06:02:13] -rw------- 1 boinc boinc    880640 Jul 23 06:02 result.tar.gz
06:02:15 (3082605): run_atlas exited; CPU time 54343.701455
06:02:15 (3082605): called boinc_finish(0)

</stderr_txt>
]]>

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