Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:23 (3719345): wrapper (7.7.26015): starting
12:49:23 (3719345): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 12:49:23] Arguments: --nthreads 8
[2025-07-22 12:49:23] Threads: 8
[2025-07-22 12:49:23] Checking for CVMFS
[2025-07-22 12:49:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 12:49:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 12:49:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 12:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 12:49:24] 2.11.3.0 3092632 469879 206844 148631 0 699 41952496 45568001 14577 130560 0 2472805567 99.768 1923537632 18649 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 12:49:24] CVMFS is ok
[2025-07-22 12:49:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 12:49:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 12:49:24] Further information can be found at the LHC@home message board.
[2025-07-22 12:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 12:49:24] Checking for apptainer binary...
[2025-07-22 12:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 12:49:24] Running /usr/bin/apptainer --version
[2025-07-22 12:49:24] apptainer version 1.3.3-1.el9
[2025-07-22 12:49:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 12:49:24] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0011.triumf.lcg
[2025-07-22 12:49:24] apptainer works
[2025-07-22 12:49:24] Set ATHENA_PROC_NUMBER=8
[2025-07-22 12:49:24] Set ATHENA_CORE_NUMBER=8
[2025-07-22 12:49:24] Starting ATLAS job with PandaID=6742500657
[2025-07-22 12:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 12:53:27]  *** The last 200 lines of the pilot log: ***
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | found no stored workdir sizes
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | wrong length of table data, x=[1753213823.0], y=[1617.0] (must be same and length>=4)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | ..............................
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . Timing measurements:
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . get job = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . initial setup = 3 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . payload setup = 11 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . stage-in = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . payload execution = 28 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . stage-out = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . log creation = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | ..............................
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742500657/pilotlog.txt
[2025-07-22 12:53:27] 2025-07-22 19:52:54,543 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 12:53:27] - Log from pilotlog.txt -
[2025-07-22 12:53:27] 2025-07-22 19:52:54,529 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:53:27] 2025-07-22 19:52:54,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | found no stored workdir sizes
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | wrong length of table data, x=[1753213823.0], y=[1617.0] (must be same and length>=4)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | ..............................
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . Timing measurements:
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . get job = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . initial setup = 3 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . payload setup = 11 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . stage-in = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . payload execution = 28 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . stage-out = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . log creation = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | ..............................
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742500657/pilotlog.txt
[2025-07-22 12:53:27] 2025-07-22 19:52:54,543 | WARNING  | 
[2025-07-22 12:53:27] [begin log extracts]
[2025-07-22 12:53:27] - Log from pilotlog.txt -
[2025-07-22 12:53:27] 2025-07-22 19:52:54,529 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:53:27] 2025-07-22 19:52:54,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | found no stored workdir sizes
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 12:53:27] 2025-07-22 19:52:54,530 | WARNING  | wrong length of table data, x=[1753213823.0], y=[1617.0] (must be same and length>=4)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | ..............................
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . Timing measurements:
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . get job = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . initial setup = 3 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . payload setup = 11 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . stage-in = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . payload execution = 28 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . stage-out = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,531 | INFO     | . log creation = 0 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | ..............................
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:53:27] 2025-07-22 19:52:54,532 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742500657/pilotlog.txt
[2025-07-22 12:53:27] [end log extracts]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,544 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,545 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 12:53:27] 2025-07-22 19:52:54,650 | INFO     | 
[2025-07-22 12:53:27] 2025-07-22 19:52:54,650 | INFO     | job summary report
[2025-07-22 12:53:27] 2025-07-22 19:52:54,650 | INFO     | --------------------------------------------------
[2025-07-22 12:53:27] 2025-07-22 19:52:54,650 | INFO     | PanDA job id: 6742500657
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | task id: 45697541
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 12:50:40,503 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | pilot state: failed 
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | transexitcode: 65
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | exeerrorcode: 65
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | exitcode: 65
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | nevents: 0
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | neventsw: 0
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | pid: 3729497
[2025-07-22 12:53:27] 2025-07-22 19:52:54,651 | INFO     | pgrp: 3729497
[2025-07-22 12:53:27] 2025-07-22 19:52:54,652 | INFO     | corecount: 8
[2025-07-22 12:53:27] 2025-07-22 19:52:54,652 | INFO     | event service: False
[2025-07-22 12:53:27] 2025-07-22 19:52:54,652 | INFO     | sizes: {0: 2397497, 1: 2397525, 7: 2397787, 11: 2397815, 43: 2421095, 44: 2425387, 45: 2425543, 168: 2425709}
[2025-07-22 12:53:27] 2025-07-22 19:52:54,652 | INFO     | --------------------------------------------------
[2025-07-22 12:53:27] 2025-07-22 19:52:54,652 | INFO     | 
[2025-07-22 12:53:27] 2025-07-22 19:52:54,652 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 12:53:27] 2025-07-22 19:52:54,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | job 6742500657 has completed (purged errors)
[2025-07-22 12:53:27] 2025-07-22 19:52:54,670 | INFO     | overall cleanup function is called
[2025-07-22 12:53:27] 2025-07-22 19:52:55,677 | INFO     | --- collectZombieJob: --- 10, [3729497]
[2025-07-22 12:53:27] 2025-07-22 19:52:55,677 | INFO     | zombie collector waiting for pid 3729497
[2025-07-22 12:53:27] 2025-07-22 19:52:55,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 12:53:27] 2025-07-22 19:52:55,677 | INFO     | collected zombie processes
[2025-07-22 12:53:27] 2025-07-22 19:52:55,678 | INFO     | will attempt to kill all subprocesses of pid=3729497
[2025-07-22 12:53:27] 2025-07-22 19:52:56,312 | INFO     | process IDs to be killed: [3729497] (in reverse order)
[2025-07-22 12:53:27] 2025-07-22 19:52:56,381 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 12:53:27] 2025-07-22 19:52:56,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 12:53:27] 2025-07-22 19:52:56,412 | INFO     | did not find any defunct processes belonging to 3729497
[2025-07-22 12:53:27] 2025-07-22 19:52:56,436 | INFO     | did not find any defunct processes belonging to 3729497
[2025-07-22 12:53:27] 2025-07-22 19:52:56,437 | INFO     | ready for new job
[2025-07-22 12:53:27] 2025-07-22 19:52:56,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 12:53:27] 2025-07-22 19:52:56,438 | INFO     | ***************************************
[2025-07-22 12:53:27] 2025-07-22 19:52:56,438 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 12:53:27] 2025-07-22 19:52:56,439 | INFO     | ***************************************
[2025-07-22 12:53:27] 2025-07-22 19:52:56,439 | INFO     | 
[2025-07-22 12:53:27] 2025-07-22 19:52:56,459 | INFO     | architecture information:
[2025-07-22 12:53:27] 2025-07-22 19:52:56,460 | INFO     | executing command: cat /etc/os-release
[2025-07-22 12:53:27] 2025-07-22 19:52:56,488 | INFO     | cat /etc/os-release:
[2025-07-22 12:53:27] NAME="CentOS Linux"
[2025-07-22 12:53:27] VERSION="7 (Core)"
[2025-07-22 12:53:27] ID="centos"
[2025-07-22 12:53:27] ID_LIKE="rhel fedora"
[2025-07-22 12:53:27] VERSION_ID="7"
[2025-07-22 12:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 12:53:27] ANSI_COLOR="0;31"
[2025-07-22 12:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 12:53:27] HOME_URL="https://www.centos.org/"
[2025-07-22 12:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 12:53:27] 
[2025-07-22 12:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 12:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 12:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 12:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 12:53:27] 
[2025-07-22 12:53:27] 2025-07-22 19:52:56,489 | INFO     | ***************************************
[2025-07-22 12:53:27] 2025-07-22 19:52:57,002 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 12:53:27] 2025-07-22 19:52:57,018 | INFO     | sufficient remaining disk space (1163838619648 B)
[2025-07-22 12:53:27] 2025-07-22 19:52:57,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 12:53:27] 2025-07-22 19:52:57,019 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 12:53:27] 2025-07-22 19:52:57,019 | INFO     | update_server=False
[2025-07-22 12:53:27] 2025-07-22 19:52:57,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 12:53:27] 2025-07-22 19:52:57,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 12:53:27] 2025-07-22 19:52:57,214 | INFO     | all payload control threads have been joined
[2025-07-22 12:53:27] 2025-07-22 19:52:57,496 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 12:53:27] 2025-07-22 19:52:57,496 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 12:53:27] 2025-07-22 19:52:57,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:53:27] 2025-07-22 19:52:57,496 | INFO     | will abort loop
[2025-07-22 12:53:27] 2025-07-22 19:52:57,739 | INFO     | all data control threads have been joined
[2025-07-22 12:53:27] 2025-07-22 19:52:57,741 | INFO     | all job control threads have been joined
[2025-07-22 12:53:27] 2025-07-22 19:52:58,025 | INFO     | [job] retrieve thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,049 | INFO     | [job] validate thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,050 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,220 | INFO     | [payload] control thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,474 | INFO     | [data] copytool_in thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,504 | INFO     | [job] job monitor thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,521 | INFO     | [payload] validate_post thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,533 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 12:53:27] 2025-07-22 19:52:58,632 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,745 | INFO     | [data] control thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:58,747 | INFO     | [job] control thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:59,031 | INFO     | [data] copytool_out thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:59,193 | INFO     | [payload] failed_post thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:59,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:52:59,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:53:27] 2025-07-22 19:53:00,682 | INFO     | [job] queue monitor thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:53:02,606 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 12:53:27] 2025-07-22 19:53:03,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055134865216)>', '<ExcThread(monitor, started 140054815020800)>']
[2025-07-22 12:53:27] 2025-07-22 19:53:08,772 | INFO     | all workflow threads have been joined
[2025-07-22 12:53:27] 2025-07-22 19:53:08,772 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 12:53:27] 2025-07-22 19:53:08,773 | INFO     | traces error code: 0
[2025-07-22 12:53:27] 2025-07-22 19:53:08,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 12:53:27] 2025-07-22 19:53:26,893 | INFO     | PID=3722970 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 12:53:27] 2025-07-22 19:53:26,893 | INFO     | .. there are 33 such processes running
[2025-07-22 12:53:27] 2025-07-22 19:53:26,894 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 12:53:27] 2025-07-22 19:53:26,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 12:53:27] 2025-07-22 19:53:26,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 12:53:27] 2025-07-22 19:53:26,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 12:53:27] 2025-07-22 19:53:26,894 | INFO     | [monitor] control thread has ended
[2025-07-22 12:53:27] 2025-07-22 19:53:27,041 [wrapper] ==== pilot stdout END ====
[2025-07-22 12:53:27] 2025-07-22 19:53:27,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 12:53:27] 2025-07-22 19:53:27,094 [wrapper] pilotpid: 3722970
[2025-07-22 12:53:27] 2025-07-22 19:53:27,096 [wrapper] Pilot exit status: 0
[2025-07-22 12:53:27] 2025-07-22 19:53:27,162 [wrapper] pandaids: 6742500657
[2025-07-22 12:53:27] 2025-07-22 19:53:27,229 [wrapper] cleanup supervisor_pilot 3722976 3722971
[2025-07-22 12:53:27] 2025-07-22 19:53:27,231 [wrapper] Test setup, not cleaning
[2025-07-22 12:53:27] 2025-07-22 19:53:27,237 [wrapper] apfmon messages muted
[2025-07-22 12:53:27] 2025-07-22 19:53:27,242 [wrapper] ==== wrapper stdout END ====
[2025-07-22 12:53:27] 2025-07-22 19:53:27,248 [wrapper] ==== wrapper stderr END ====
[2025-07-22 12:53:27]  *** Error codes and diagnostics ***
[2025-07-22 12:53:27]     "exeErrorCode": 65,
[2025-07-22 12:53:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:53:27]     "pilotErrorCode": 1305,
[2025-07-22 12:53:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:53:27]  *** Listing of results directory ***
[2025-07-22 12:53:27] total 340312
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc    530466 Jul 22 09:21 pilot3.tar.gz
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc      5112 Jul 22 09:30 queuedata.json
[2025-07-22 12:53:27] -rwx------. 1 boinc boinc     36292 Jul 22 09:34 runpilot2-wrapper.sh
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc       100 Jul 22 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 12:53:27] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 12:49 run_atlas
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc       105 Jul 22 12:49 job.xml
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc      6449 Jul 22 12:49 init_data.xml
[2025-07-22 12:53:27] -rw-r--r--. 2 boinc boinc 344412621 Jul 22 12:49 EVNT.45697539._000210.pool.root.1
[2025-07-22 12:53:27] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:49 start_atlas.sh
[2025-07-22 12:53:27] drwxrwx--x. 2 boinc boinc      4096 Jul 22 12:49 shared
[2025-07-22 12:53:27] -rw-r--r--. 2 boinc boinc    542902 Jul 22 12:49 input.tar.gz
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc         0 Jul 22 12:49 boinc_lockfile
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc      2590 Jul 22 12:49 pandaJob.out
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc    977712 Jul 22 12:49 agis_schedconf.cvmfs.json
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc   1593031 Jul 22 12:49 agis_ddmendpoints.agis.ALL.json
[2025-07-22 12:53:27] drwx------. 4 boinc boinc      4096 Jul 22 12:49 pilot3
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc       982 Jul 22 12:50 memory_monitor_summary.json
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc     20560 Jul 22 12:50 log.45697541._001740.job.log.tgz.1
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc        95 Jul 22 12:52 pilot_heartbeat.json
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc      8406 Jul 22 12:52 heartbeat.json
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc        22 Jul 22 12:53 wrapper_checkpoint.txt
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc      8192 Jul 22 12:53 boinc_mmap_file
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc       524 Jul 22 12:53 boinc_task_state.xml
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc       823 Jul 22 12:53 pilotlog.txt
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc     75681 Jul 22 12:53 log.45697541._001740.job.log.1
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc       188 Jul 22 12:53 output.list
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc       620 Jul 22 12:53 runtime_log
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc    112640 Jul 22 12:53 result.tar.gz
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc      8648 Jul 22 12:53 runtime_log.err
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc       645 Jul 22 12:53 pZ5KDmL8Uy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXCvKDmIDUMjm.diag
[2025-07-22 12:53:27] -rw-r--r--. 1 boinc boinc     21849 Jul 22 12:53 stderr.txt
[2025-07-22 12:53:27] No HITS result produced
[2025-07-22 12:53:27]  *** Contents of shared directory: ***
[2025-07-22 12:53:27] total 337008
[2025-07-22 12:53:27] -rw-r--r--. 2 boinc boinc 344412621 Jul 22 12:49 ATLAS.root_0
[2025-07-22 12:53:27] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:49 start_atlas.sh
[2025-07-22 12:53:27] -rw-r--r--. 2 boinc boinc    542902 Jul 22 12:49 input.tar.gz
[2025-07-22 12:53:27] -rw-------. 1 boinc boinc    112640 Jul 22 12:53 result.tar.gz
12:53:28 (3719345): run_atlas exited; CPU time 23.928749
12:53:28 (3719345): called boinc_finish(0)

</stderr_txt>
]]>

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