Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-24 18:09:13 (13440): Detected: vboxwrapper 26206
2025-07-24 18:09:13 (13440): Detected: BOINC client v8.0.2
2025-07-24 18:09:14 (13440): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-24 18:09:14 (13440): Successfully copied 'init_data.xml' to the shared directory.
2025-07-24 18:09:14 (13440): Create VM. (boinc_f0777545d738b6fb, slot#0)
2025-07-24 18:09:15 (13440): Setting Memory Size for VM. (4400MB)
2025-07-24 18:09:15 (13440): Setting CPU Count for VM. (4)
2025-07-24 18:09:15 (13440): Setting Chipset Options for VM.
2025-07-24 18:09:16 (13440): Setting Graphics Controller Options for VM.
2025-07-24 18:09:16 (13440): Setting Boot Options for VM.
2025-07-24 18:09:16 (13440): Setting Network Configuration for NAT.
2025-07-24 18:09:16 (13440): Enabling VM Network Access.
2025-07-24 18:09:17 (13440): Disabling USB Support for VM.
2025-07-24 18:09:17 (13440): Disabling COM Port Support for VM.
2025-07-24 18:09:17 (13440): Disabling LPT Port Support for VM.
2025-07-24 18:09:17 (13440): Disabling Audio Support for VM.
2025-07-24 18:09:18 (13440): Disabling Clipboard Support for VM.
2025-07-24 18:09:18 (13440): Disabling Drag and Drop Support for VM.
2025-07-24 18:09:18 (13440): Adding storage controller(s) to VM.
2025-07-24 18:09:18 (13440): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-24 18:09:19 (13440): Adding VirtualBox Guest Additions to VM.
2025-07-24 18:09:19 (13440): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-24 18:09:19 (13440): forwarding host port 50053 to guest port 80
2025-07-24 18:09:20 (13440): Enabling remote desktop for VM.
2025-07-24 18:09:20 (13440): Required extension pack not installed, remote desktop not enabled.
2025-07-24 18:09:20 (13440): Enabling shared directory for VM.
2025-07-24 18:09:20 (13440): Starting VM using VBoxManage interface. (boinc_f0777545d738b6fb, slot#0)
2025-07-24 18:09:26 (13440): Successfully started VM. (PID = '16592')
2025-07-24 18:09:26 (13440): Reporting VM Process ID to BOINC.
2025-07-24 18:09:26 (13440): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-24 18:09:26 (13440): Guest Log: CPUID EDX: 0x178bfbff
2025-07-24 18:09:26 (13440): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-24 18:09:26 (13440): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-24 18:09:26 (13440): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-24 18:09:26 (13440): Detected: Web Application Enabled (http://localhost:50053)
2025-07-24 18:09:26 (13440): Preference change detected
2025-07-24 18:09:26 (13440): Setting CPU throttle for VM. (100%)
2025-07-24 18:09:26 (13440): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-24 18:09:28 (13440): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-24 18:09:28 (13440): Guest Log: BIOS: Booting from Hard Disk...
2025-07-24 18:09:30 (13440): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-24 18:09:30 (13440): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-24 18:09:30 (13440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-24 18:09:36 (13440): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-24 18:09:36 (13440): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-24 18:09:39 (13440): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000113 main     Log opened 2025-07-24T18:09:37.712902000Z
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000179 main     OS Product: Linux
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000204 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000222 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000240 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000241 main     Process ID: 1296
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000241 main     Package type: LINUX_64BITS_GENERIC
2025-07-24 18:09:39 (13440): Guest Log: 00:00:00.000736 main     5.2.32 r132073 started. Verbose level = 0
2025-07-24 18:09:39 (13440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-24 18:09:39 (13440): Guest Log: [INFO] Mounting shared directory
2025-07-24 18:09:39 (13440): Guest Log: [INFO] Checking for init_data.xml
2025-07-24 18:09:47 (13440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-24 18:09:47 (13440): Guest Log: [INFO] Detected branch: prod
2025-07-24 18:09:47 (13440): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-24 18:09:47 (13440): Guest Log: Copying input files
2025-07-24 18:09:47 (13440): Guest Log: Copied input files into RunAtlas.
2025-07-24 18:09:48 (13440): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-24 18:09:48 (13440): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-24 18:09:48 (13440): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-24 18:09:48 (13440): Guest Log: Further information can be found at the LHC@home message board.
2025-07-24 18:09:49 (13440): Guest Log: 00:00:10.002547 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 227 325 000ns (GuestNow=1 753 373 389 486 992 000 ns GuestLast=1 753 380 577 714 317 000 ns fSetTimeLastLoop=true )
2025-07-24 18:09:55 (13440): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-24 18:09:55 (13440): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-24 18:09:55 (13440): Guest Log: 2.6.3.0 1574 0 30160 148707 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-24 18:09:56 (13440): Guest Log: copied the webapp to /var/www
2025-07-24 18:09:56 (13440): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-24 18:09:56 (13440): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-24 18:09:56 (13440): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-24 18:09:56 (13440): Guest Log:  *** Starting ATLAS job. (PandaID=6741760486 taskID=45697472) ***
2025-07-24 19:49:31 (13440): Status Report: Elapsed Time: '6000.000000'
2025-07-24 19:49:31 (13440): Status Report: CPU Time: '22866.765625'
2025-07-24 20:50:52 (13440): Guest Log:  *** Job finished ***
2025-07-24 20:50:52 (13440): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:35,409 | INFO     | [data] queue_monitor thread has finished
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:41,891 | INFO     | job.realtimelogging is not enabled
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:42,903 | INFO     | [payload] run_realtimelog thread has finished
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:44,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647026218816)>', '<ExcThread(monitor, started 140646186727168)>']
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:44,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:44,872 | INFO     | [monitor] control thread has ended
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,055 | INFO     | all workflow threads have been joined
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,055 | INFO     | end of generic workflow (traces error code: 0)
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,055 | INFO     | traces error code: 0
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,108 [wrapper] ==== pilot stdout END ====
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,111 [wrapper] ==== wrapper stdout RESUME ====
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,114 [wrapper] pilotpid: 5893
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,118 [wrapper] Pilot exit status: 0
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,171 [wrapper] pandaids: 6741760486
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,188 [wrapper] cleanup supervisor_pilot  6440 5894
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,191 [wrapper] Test setup, not cleaning
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,193 [wrapper] apfmon messages muted
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,196 [wrapper] ==== wrapper stdout END ====
2025-07-24 20:50:52 (13440): Guest Log: 2025-07-24 18:50:49,198 [wrapper] ==== wrapper stderr END ====
2025-07-24 20:50:52 (13440): Guest Log:  *** Error codes and diagnostics ***
2025-07-24 20:50:52 (13440): Guest Log:     "exeErrorCode": 0,
2025-07-24 20:50:52 (13440): Guest Log:     "exeErrorDiag": "",
2025-07-24 20:50:52 (13440): Guest Log:     "pilotErrorCode": 0,
2025-07-24 20:50:52 (13440): Guest Log:     "pilotErrorDiag": "",
2025-07-24 20:50:52 (13440): Guest Log:  *** Listing of results directory ***
2025-07-24 20:50:52 (13440): Guest Log: total 284220
2025-07-24 20:50:52 (13440): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 22 08:26 pilot3.tar.gz
2025-07-24 20:50:52 (13440): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 22 08:35 queuedata.json
2025-07-24 20:50:52 (13440): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 22 08:40 runpilot2-wrapper.sh
2025-07-24 20:50:52 (13440): Guest Log: -rwxr-xr-x. 1 atlas atlas      8963 Jul 24 16:09 init_data.xml
2025-07-24 20:50:52 (13440): Guest Log: -rwxr-xr-x. 1 atlas atlas    542900 Jul 24 16:09 input.tar.gz
2025-07-24 20:50:52 (13440): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 24 16:09 start_atlas.sh
2025-07-24 20:50:52 (13440): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 24 16:09 EVNT.45697470._000057.pool.root.1 -> /data/./ATLAS.root_0
2025-07-24 20:50:52 (13440): Guest Log: -rw-r--r--. 1 atlas atlas      2611 Jul 24 16:09 pandaJob.out
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas    979677 Jul 24 16:10 agis_schedconf.cvmfs.json
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 24 16:10 agis_ddmendpoints.agis.ALL.json
2025-07-24 20:50:52 (13440): Guest Log: drwx------. 4 atlas atlas      4096 Jul 24 16:10 pilot3
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas        95 Jul 24 18:49 pilot_heartbeat.json
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas 285034024 Jul 24 18:49 HITS.45697472._001405.pool.root.1
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas      1031 Jul 24 18:50 memory_monitor_summary.json
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas    272989 Jul 24 18:50 log.45697472._001405.job.log.tgz.1
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas      7814 Jul 24 18:50 heartbeat.json
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 24 18:50 pilotlog.txt
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas    824206 Jul 24 18:50 log.45697472._001405.job.log.1
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas       357 Jul 24 18:50 output.list
2025-07-24 20:50:52 (13440): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 24 18:50 runtime_log
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas   1116160 Jul 24 18:50 result.tar.gz
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas       656 Jul 24 18:50 ZOCODmHjNy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfvILDmxajwPm.diag
2025-07-24 20:50:52 (13440): Guest Log: -rw-r--r--. 1 atlas atlas      8599 Jul 24 18:50 runtime_log.err
2025-07-24 20:50:52 (13440): Guest Log: Looking for outputfile HITS.45697472._001405.pool.root.1
2025-07-24 20:50:52 (13440): Guest Log: HITS file was successfully produced
2025-07-24 20:50:52 (13440): Guest Log: -rw-------. 1 atlas atlas 285034024 Jul 24 18:49 /home/atlas/RunAtlas/HITS.45697472._001405.pool.root.1
2025-07-24 20:50:53 (13440): Guest Log: Successfully finished the ATLAS job!
2025-07-24 20:50:53 (13440): Guest Log: Copying the results back to the shared directory!
2025-07-24 20:50:53 (13440): Guest Log:  *** Contents of shared directory: ***
2025-07-24 20:50:53 (13440): Guest Log: total 603276
2025-07-24 20:50:53 (13440): Guest Log: -rwxrwxrwx. 1 root root 331025634 Jul 24 16:09 ATLAS.root_0
2025-07-24 20:50:53 (13440): Guest Log: -rwxrwxrwx. 1 root root 285034024 Jul 24 18:50 HITS.pool.root.1
2025-07-24 20:50:53 (13440): Guest Log: -rwxrwxrwx. 1 root root      8963 Jul 24 16:09 init_data.xml
2025-07-24 20:50:53 (13440): Guest Log: -rwxrwxrwx. 1 root root    542900 Jul 22 19:34 input.tar.gz
2025-07-24 20:50:53 (13440): Guest Log: -rwxrwxrwx. 1 root root   1116160 Jul 24 18:50 result.tar.gz
2025-07-24 20:50:53 (13440): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 22 19:34 start_atlas.sh
2025-07-24 20:50:53 (13440): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-24 20:50:53 (13440): VM Completion File Detected.
2025-07-24 20:50:53 (13440): Powering off VM.
2025-07-24 20:50:54 (13440): Successfully stopped VM.
2025-07-24 20:50:54 (13440): Deregistering VM. (boinc_f0777545d738b6fb, slot#0)
2025-07-24 20:50:54 (13440): Removing network bandwidth throttle group from VM.
2025-07-24 20:50:54 (13440): Removing VM from VirtualBox.
20:50:59 (13440): called boinc_finish(0)

</stderr_txt>
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