Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:28:01 (2449263): wrapper (7.7.26015): starting
12:28:01 (2449263): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 12:28:01] Arguments: --nthreads 8
[2025-07-22 12:28:01] Threads: 8
[2025-07-22 12:28:01] Checking for CVMFS
[2025-07-22 12:28:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 12:28:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 12:28:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 12:28:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 12:28:03] 2.11.3.0 23619 472126 213592 148631 3 599 30298479 45568001 12882 130560 0 2515952147 99.758 1957411116 18550 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-22 12:28:03] CVMFS is ok
[2025-07-22 12:28:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 12:28:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 12:28:03] Further information can be found at the LHC@home message board.
[2025-07-22 12:28:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 12:28:03] Checking for apptainer binary...
[2025-07-22 12:28:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 12:28:03] Running /usr/bin/apptainer --version
[2025-07-22 12:28:03] apptainer version 1.3.3-1.el9
[2025-07-22 12:28:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 12:28:03] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0004.triumf.lcg
[2025-07-22 12:28:03] apptainer works
[2025-07-22 12:28:03] Set ATHENA_PROC_NUMBER=8
[2025-07-22 12:28:03] Set ATHENA_CORE_NUMBER=8
[2025-07-22 12:28:03] Starting ATLAS job with PandaID=6742500289
[2025-07-22 12:28:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 12:32:30]  *** The last 200 lines of the pilot log: ***
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:32:30] 2025-07-22 19:31:57,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:32:30] 2025-07-22 19:31:57,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | WARNING  | wrong length of table data, x=[1753212553.0], y=[2575.0] (must be same and length>=4)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | ..............................
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . Timing measurements:
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . get job = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . initial setup = 3 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . payload setup = 14 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . stage-in = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . payload execution = 33 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . stage-out = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . log creation = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,111 | INFO     | ..............................
[2025-07-22 12:32:30] 2025-07-22 19:31:57,111 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:32:30] 2025-07-22 19:31:57,112 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742500289/pilotlog.txt
[2025-07-22 12:32:30] 2025-07-22 19:31:57,154 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 12:32:30] - Log from pilotlog.txt -
[2025-07-22 12:32:30] 2025-07-22 19:31:57,062 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742500289/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | INFO     | extracted standard info from prmon json
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:32:30] 2025-07-22 19:31:57,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:32:30] 2025-07-22 19:31:57,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | WARNING  | wrong length of table data, x=[1753212553.0], y=[2575.0] (must be same and length>=4)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | ..............................
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . Timing measurements:
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . get job = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . initial setup = 3 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . payload setup = 14 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . stage-in = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . payload execution = 33 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . stage-out = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . log creation = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,111 | INFO     | ..............................
[2025-07-22 12:32:30] 2025-07-22 19:31:57,111 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:32:30] 2025-07-22 19:31:57,112 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742500289/pilotlog.txt
[2025-07-22 12:32:30] 2025-07-22 19:31:57,154 | WARNING  | 
[2025-07-22 12:32:30] [begin log extracts]
[2025-07-22 12:32:30] - Log from pilotlog.txt -
[2025-07-22 12:32:30] 2025-07-22 19:31:57,062 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742500289/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | INFO     | extracted standard info from prmon json
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:32:30] 2025-07-22 19:31:57,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:32:30] 2025-07-22 19:31:57,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:32:30] 2025-07-22 19:31:57,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | WARNING  | wrong length of table data, x=[1753212553.0], y=[2575.0] (must be same and length>=4)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | ..............................
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . Timing measurements:
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . get job = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,088 | INFO     | . initial setup = 3 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . payload setup = 14 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . stage-in = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . payload execution = 33 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . stage-out = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,089 | INFO     | . log creation = 0 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,111 | INFO     | ..............................
[2025-07-22 12:32:30] 2025-07-22 19:31:57,111 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:32:30] 2025-07-22 19:31:57,112 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742500289/pilotlog.txt
[2025-07-22 12:32:30] [end log extracts]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,155 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,156 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 12:32:30] 2025-07-22 19:31:57,541 | INFO     | 
[2025-07-22 12:32:30] 2025-07-22 19:31:57,541 | INFO     | job summary report
[2025-07-22 12:32:30] 2025-07-22 19:31:57,541 | INFO     | --------------------------------------------------
[2025-07-22 12:32:30] 2025-07-22 19:31:57,541 | INFO     | PanDA job id: 6742500289
[2025-07-22 12:32:30] 2025-07-22 19:31:57,541 | INFO     | task id: 45697541
[2025-07-22 12:32:30] 2025-07-22 19:31:57,541 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 12:29:33,492 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | pilot state: failed 
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | transexitcode: 65
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | exeerrorcode: 65
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | exitcode: 65
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | nevents: 0
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | neventsw: 0
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | pid: 2459163
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | pgrp: 2459163
[2025-07-22 12:32:30] 2025-07-22 19:31:57,542 | INFO     | corecount: 8
[2025-07-22 12:32:30] 2025-07-22 19:31:57,543 | INFO     | event service: False
[2025-07-22 12:32:30] 2025-07-22 19:31:57,543 | INFO     | sizes: {0: 2397332, 1: 2397531, 8: 2397793, 12: 2397821, 51: 2421072, 52: 2421048, 53: 2425496, 55: 2425584, 186: 2425750}
[2025-07-22 12:32:30] 2025-07-22 19:31:57,543 | INFO     | --------------------------------------------------
[2025-07-22 12:32:30] 2025-07-22 19:31:57,543 | INFO     | 
[2025-07-22 12:32:30] 2025-07-22 19:31:57,543 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 12:32:30] 2025-07-22 19:31:57,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | job 6742500289 has completed (purged errors)
[2025-07-22 12:32:30] 2025-07-22 19:31:57,701 | INFO     | overall cleanup function is called
[2025-07-22 12:32:30] 2025-07-22 19:31:58,708 | INFO     | --- collectZombieJob: --- 10, [2459163]
[2025-07-22 12:32:30] 2025-07-22 19:31:58,708 | INFO     | zombie collector waiting for pid 2459163
[2025-07-22 12:32:30] 2025-07-22 19:31:58,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 12:32:30] 2025-07-22 19:31:58,708 | INFO     | collected zombie processes
[2025-07-22 12:32:30] 2025-07-22 19:31:58,709 | INFO     | will attempt to kill all subprocesses of pid=2459163
[2025-07-22 12:32:30] 2025-07-22 19:31:58,978 | INFO     | process IDs to be killed: [2459163] (in reverse order)
[2025-07-22 12:32:30] 2025-07-22 19:31:59,077 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 12:32:30] 2025-07-22 19:31:59,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 12:32:30] 2025-07-22 19:31:59,148 | INFO     | did not find any defunct processes belonging to 2459163
[2025-07-22 12:32:30] 2025-07-22 19:31:59,178 | INFO     | did not find any defunct processes belonging to 2459163
[2025-07-22 12:32:30] 2025-07-22 19:31:59,199 | INFO     | ready for new job
[2025-07-22 12:32:30] 2025-07-22 19:31:59,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 12:32:30] 2025-07-22 19:31:59,201 | INFO     | ***************************************
[2025-07-22 12:32:30] 2025-07-22 19:31:59,201 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 12:32:30] 2025-07-22 19:31:59,201 | INFO     | ***************************************
[2025-07-22 12:32:30] 2025-07-22 19:31:59,201 | INFO     | 
[2025-07-22 12:32:30] 2025-07-22 19:31:59,218 | INFO     | architecture information:
[2025-07-22 12:32:30] 2025-07-22 19:31:59,228 | INFO     | executing command: cat /etc/os-release
[2025-07-22 12:32:30] 2025-07-22 19:31:59,357 | INFO     | cat /etc/os-release:
[2025-07-22 12:32:30] NAME="CentOS Linux"
[2025-07-22 12:32:30] VERSION="7 (Core)"
[2025-07-22 12:32:30] ID="centos"
[2025-07-22 12:32:30] ID_LIKE="rhel fedora"
[2025-07-22 12:32:30] VERSION_ID="7"
[2025-07-22 12:32:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 12:32:30] ANSI_COLOR="0;31"
[2025-07-22 12:32:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 12:32:30] HOME_URL="https://www.centos.org/"
[2025-07-22 12:32:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 12:32:30] 
[2025-07-22 12:32:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 12:32:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 12:32:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 12:32:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 12:32:30] 
[2025-07-22 12:32:30] 2025-07-22 19:31:59,357 | INFO     | ***************************************
[2025-07-22 12:32:30] 2025-07-22 19:31:59,861 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 12:32:30] 2025-07-22 19:31:59,906 | INFO     | sufficient remaining disk space (1148977152000 B)
[2025-07-22 12:32:30] 2025-07-22 19:31:59,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 12:32:30] 2025-07-22 19:31:59,906 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 12:32:30] 2025-07-22 19:31:59,906 | INFO     | update_server=False
[2025-07-22 12:32:30] 2025-07-22 19:31:59,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 12:32:30] 2025-07-22 19:31:59,918 | INFO     | all data control threads have been joined
[2025-07-22 12:32:30] 2025-07-22 19:31:59,949 | INFO     | all payload control threads have been joined
[2025-07-22 12:32:30] 2025-07-22 19:32:00,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 12:32:30] 2025-07-22 19:32:00,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:32:30] 2025-07-22 19:32:00,779 | INFO     | aborting loop
[2025-07-22 12:32:30] 2025-07-22 19:32:00,916 | INFO     | [job] retrieve thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:00,924 | INFO     | [data] control thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:00,955 | INFO     | [payload] control thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:00,992 | INFO     | all job control threads have been joined
[2025-07-22 12:32:30] 2025-07-22 19:32:01,009 | INFO     | [payload] failed_post thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,378 | INFO     | [data] copytool_in thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,424 | INFO     | [job] validate thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,743 | INFO     | [payload] validate_post thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,785 | INFO     | [job] job monitor thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,831 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,857 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,991 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,993 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:01,998 | INFO     | [job] control thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:02,153 | INFO     | [data] copytool_out thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:02,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:32:30] 2025-07-22 19:32:03,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 12:32:30] 2025-07-22 19:32:03,564 | INFO     | [job] queue monitor thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:07,161 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 12:32:30] 2025-07-22 19:32:07,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768849196864)>', '<ExcThread(monitor, started 139768528606976)>']
[2025-07-22 12:32:30] 2025-07-22 19:32:12,718 | INFO     | all workflow threads have been joined
[2025-07-22 12:32:30] 2025-07-22 19:32:12,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 12:32:30] 2025-07-22 19:32:12,718 | INFO     | traces error code: 0
[2025-07-22 12:32:30] 2025-07-22 19:32:12,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 12:32:30] 2025-07-22 19:32:30,406 | INFO     | PID=2452848 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 12:32:30] 2025-07-22 19:32:30,406 | INFO     | .. there are 26 such processes running
[2025-07-22 12:32:30] 2025-07-22 19:32:30,407 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 12:32:30] 2025-07-22 19:32:30,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 12:32:30] 2025-07-22 19:32:30,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 12:32:30] 2025-07-22 19:32:30,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 12:32:30] 2025-07-22 19:32:30,408 | INFO     | [monitor] control thread has ended
[2025-07-22 12:32:30] 2025-07-22 19:32:30,585 [wrapper] ==== pilot stdout END ====
[2025-07-22 12:32:30] 2025-07-22 19:32:30,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 12:32:30] 2025-07-22 19:32:30,618 [wrapper] pilotpid: 2452848
[2025-07-22 12:32:30] 2025-07-22 19:32:30,620 [wrapper] Pilot exit status: 0
[2025-07-22 12:32:30] 2025-07-22 19:32:30,655 [wrapper] pandaids: 6742500289
[2025-07-22 12:32:30] 2025-07-22 19:32:30,693 [wrapper] cleanup supervisor_pilot 2452854 2452849
[2025-07-22 12:32:30] 2025-07-22 19:32:30,695 [wrapper] Test setup, not cleaning
[2025-07-22 12:32:30] 2025-07-22 19:32:30,697 [wrapper] apfmon messages muted
[2025-07-22 12:32:30] 2025-07-22 19:32:30,698 [wrapper] ==== wrapper stdout END ====
[2025-07-22 12:32:30] 2025-07-22 19:32:30,700 [wrapper] ==== wrapper stderr END ====
[2025-07-22 12:32:30]  *** Error codes and diagnostics ***
[2025-07-22 12:32:30]     "exeErrorCode": 65,
[2025-07-22 12:32:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:32:30]     "pilotErrorCode": 1305,
[2025-07-22 12:32:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:32:30]  *** Listing of results directory ***
[2025-07-22 12:32:30] total 342364
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc    530466 Jul 22 08:14 pilot3.tar.gz
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc      5112 Jul 22 09:10 queuedata.json
[2025-07-22 12:32:30] -rwx------. 1 boinc boinc     36292 Jul 22 09:14 runpilot2-wrapper.sh
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc       100 Jul 22 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 12:32:30] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 12:27 run_atlas
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc       105 Jul 22 12:27 job.xml
[2025-07-22 12:32:30] -rw-r--r--. 2 boinc boinc 346501561 Jul 22 12:28 EVNT.45697539._000197.pool.root.1
[2025-07-22 12:32:30] -rw-r--r--. 2 boinc boinc    542903 Jul 22 12:28 input.tar.gz
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc      6448 Jul 22 12:28 init_data.xml
[2025-07-22 12:32:30] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:28 start_atlas.sh
[2025-07-22 12:32:30] drwxrwx--x. 2 boinc boinc      4096 Jul 22 12:28 shared
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc         0 Jul 22 12:28 boinc_lockfile
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc      2593 Jul 22 12:28 pandaJob.out
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc    977712 Jul 22 12:28 agis_schedconf.cvmfs.json
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc   1593031 Jul 22 12:28 agis_ddmendpoints.agis.ALL.json
[2025-07-22 12:32:30] drwx------. 4 boinc boinc      4096 Jul 22 12:28 pilot3
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc       522 Jul 22 12:29 boinc_task_state.xml
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc       985 Jul 22 12:29 memory_monitor_summary.json
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc     21158 Jul 22 12:29 log.45697541._001431.job.log.tgz.1
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc        95 Jul 22 12:31 pilot_heartbeat.json
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc      8397 Jul 22 12:31 heartbeat.json
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc       823 Jul 22 12:32 pilotlog.txt
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc     78564 Jul 22 12:32 log.45697541._001431.job.log.1
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc       188 Jul 22 12:32 output.list
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc       620 Jul 22 12:32 runtime_log
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc    122880 Jul 22 12:32 result.tar.gz
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc      8192 Jul 22 12:32 boinc_mmap_file
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc      8648 Jul 22 12:32 runtime_log.err
[2025-07-22 12:32:30] -rw-------. 1 boinc boinc       645 Jul 22 12:32 lqGMDm7nUy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzkJLDmhsdfPn.diag
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc        22 Jul 22 12:32 wrapper_checkpoint.txt
[2025-07-22 12:32:30] -rw-r--r--. 1 boinc boinc     21523 Jul 22 12:32 stderr.txt
[2025-07-22 12:32:31] No HITS result produced
[2025-07-22 12:32:31]  *** Contents of shared directory: ***
[2025-07-22 12:32:31] total 339056
[2025-07-22 12:32:31] -rw-r--r--. 2 boinc boinc 346501561 Jul 22 12:28 ATLAS.root_0
[2025-07-22 12:32:31] -rw-r--r--. 2 boinc boinc    542903 Jul 22 12:28 input.tar.gz
[2025-07-22 12:32:31] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:28 start_atlas.sh
[2025-07-22 12:32:31] -rw-------. 1 boinc boinc    122880 Jul 22 12:32 result.tar.gz
12:32:32 (2449263): run_atlas exited; CPU time 24.987576
12:32:32 (2449263): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN