Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:14 (523192): wrapper (7.7.26015): starting
19:00:14 (523192): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 19:00:14] Arguments: --nthreads 12
[2025-07-22 19:00:14] Threads: 12
[2025-07-22 19:00:14] Checking for CVMFS
[2025-07-22 19:00:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 19:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 19:00:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 19:00:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 19:00:14] 2.12.6.0 1267368 11793 340528 148637 0 453 32739921 32935936 24439 16776704 0 21938381 99.683 50457389 30139 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-22 19:00:14] CVMFS is ok
[2025-07-22 19:00:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 19:00:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 19:00:14] Further information can be found at the LHC@home message board.
[2025-07-22 19:00:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 19:00:14] Checking for apptainer binary...
[2025-07-22 19:00:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 19:00:14] Running /usr/bin/apptainer --version
[2025-07-22 19:00:14] apptainer version 1.4.1-1.el9
[2025-07-22 19:00:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 19:00:15] c6-2-29-3.aglt2.org
[2025-07-22 19:00:15] apptainer works
[2025-07-22 19:00:15] Set ATHENA_PROC_NUMBER=12
[2025-07-22 19:00:15] Set ATHENA_CORE_NUMBER=12
[2025-07-22 19:00:15] Starting ATLAS job with PandaID=6742271736
[2025-07-22 19:00:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 21:41:52]  *** The last 200 lines of the pilot log: ***
[2025-07-22 21:41:52] 2025-07-23 01:41:17,259 | INFO     | PID=529204 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 21:41:52] 2025-07-23 01:41:17,259 | INFO     | .. there are 26 such processes running
[2025-07-22 21:41:52] 2025-07-23 01:41:19,187 | INFO     | monitor loop #626: job 0:6742271736 is in state 'finished'
[2025-07-22 21:41:52] 2025-07-23 01:41:19,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,579 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-22 21:41:52] 2025-07-23 01:41:19,584 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2852.555625
[2025-07-22 21:41:52] 2025-07-23 01:41:19,596 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6742271736/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,597 | INFO     | extracted standard info from prmon json
[2025-07-22 21:41:52] 2025-07-23 01:41:19,597 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 21:41:52] 2025-07-23 01:41:19,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 21:41:52] 2025-07-23 01:41:19,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 21:41:52] 2025-07-23 01:41:19,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 21:41:52] 2025-07-23 01:41:19,601 | INFO     | fitting pss+swap vs Time
[2025-07-22 21:41:52] 2025-07-23 01:41:19,601 | INFO     | sum of square deviations: 1199953339.5668824
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | sum of deviations: 42400428536.29936
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | mean x: 1753230063.0955415
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | mean y: 2356053.713375796
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | -- intersect: -61948141142.124245
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | intersect: -61948141142.124245
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | chi2: 1.780130523245813
[2025-07-22 21:41:52] 2025-07-23 01:41:19,602 | INFO     | sum of square deviations: 1088923274.519733
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | sum of deviations: 43099892824.0263
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | mean x: 1753229910.5986843
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | mean y: 2356974.1315789474
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | -- intersect: -69390981391.24393
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | intersect: -69390981391.24393
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | chi2: 1.7564229591846237
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | current chi2=1.7564229591846237 (change=1.331787964511832 %)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | right removable region: 151
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | sum of square deviations: 1088914124.519733
[2025-07-22 21:41:52] 2025-07-23 01:41:19,603 | INFO     | sum of deviations: 12881233413.22368
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | mean x: 1753230215.5986843
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | mean y: 2396271.1184210526
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | -- intersect: -20737317840.13322
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | intersect: -20737317840.13322
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | chi2: 0.06813660029164248
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | current chi2=0.06813660029164248 (change=96.1723817775224 %)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | sum of square deviations: 984953958.6666669
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | sum of deviations: 10555638624.428572
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | mean x: 1753230368.0952382
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | mean y: 2399639.4693877553
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | -- intersect: -18786769161.922546
[2025-07-22 21:41:52] 2025-07-23 01:41:19,604 | INFO     | intersect: -18786769161.922546
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | chi2: 0.06034702972472658
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | current chi2=0.06034702972472658 (change=11.43228534088067 %)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | left removable region: 20
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | sum of square deviations: 697064214.5038188
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | sum of deviations: 10571628149.290075
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | mean x: 1753230490.1068702
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | mean y: 2404984.1221374045
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | -- intersect: -26586968585.428513
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | intersect: -26586968585.428513
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | chi2: 0.032123375420136886
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | -- intersect: -26586968585.428513
[2025-07-22 21:41:52] 2025-07-23 01:41:19,605 | INFO     | current memory leak: 15.17 B/s (using 131 data points, chi2=0.03)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | could have reported an average CPU frequency of 2899 MHz (9 samples)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | ..............................
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . Timing measurements:
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . get job = 0 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . initial setup = 3 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . payload setup = 16 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . stage-in = 0 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . payload execution = 9572 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . stage-out = 0 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | . log creation = 0 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,606 | INFO     | ..............................
[2025-07-22 21:41:52] 2025-07-23 01:41:19,932 | INFO     | 
[2025-07-22 21:41:52] 2025-07-23 01:41:19,932 | INFO     | job summary report
[2025-07-22 21:41:52] 2025-07-23 01:41:19,932 | INFO     | --------------------------------------------------
[2025-07-22 21:41:52] 2025-07-23 01:41:19,932 | INFO     | PanDA job id: 6742271736
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | task id: 45697532
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | errors: (none)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | pilot state: finished 
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | transexitcode: 0
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | exeerrorcode: 0
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | exeerrordiag: 
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | exitcode: 0
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | exitmsg: OK
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | cpuconsumptiontime: 59401 s
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | nevents: 400
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | neventsw: 0
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | pid: 536332
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | pgrp: 536332
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | corecount: 12
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | event service: False
[2025-07-22 21:41:52] 2025-07-23 01:41:19,933 | INFO     | sizes: {0: 2396708, 1: 2397564, 12: 2397564, 15: 2397854, 23: 2397882, 9593: 2426384, 9594: 2435382, 9597: 2435438, 9604: 2435696}
[2025-07-22 21:41:52] 2025-07-23 01:41:19,934 | INFO     | --------------------------------------------------
[2025-07-22 21:41:52] 2025-07-23 01:41:19,934 | INFO     | 
[2025-07-22 21:41:52] 2025-07-23 01:41:19,934 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 21:41:52] 2025-07-23 01:41:19,954 | INFO     | job 6742271736 has completed (purged errors)
[2025-07-22 21:41:52] 2025-07-23 01:41:19,955 | INFO     | overall cleanup function is called
[2025-07-22 21:41:52] 2025-07-23 01:41:20,963 | INFO     | --- collectZombieJob: --- 10, [536332]
[2025-07-22 21:41:52] 2025-07-23 01:41:20,963 | INFO     | zombie collector waiting for pid 536332
[2025-07-22 21:41:52] 2025-07-23 01:41:20,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 21:41:52] 2025-07-23 01:41:20,964 | INFO     | collected zombie processes
[2025-07-22 21:41:52] 2025-07-23 01:41:20,964 | INFO     | will attempt to kill all subprocesses of pid=536332
[2025-07-22 21:41:52] 2025-07-23 01:41:21,276 | INFO     | process IDs to be killed: [536332] (in reverse order)
[2025-07-22 21:41:52] 2025-07-23 01:41:21,378 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 21:41:52] 2025-07-23 01:41:21,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 21:41:52] 2025-07-23 01:41:21,391 | INFO     | did not find any defunct processes belonging to 536332
[2025-07-22 21:41:52] 2025-07-23 01:41:21,402 | INFO     | did not find any defunct processes belonging to 536332
[2025-07-22 21:41:52] 2025-07-23 01:41:21,403 | INFO     | ready for new job
[2025-07-22 21:41:52] 2025-07-23 01:41:21,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 21:41:52] 2025-07-23 01:41:21,405 | INFO     | ***************************************
[2025-07-22 21:41:52] 2025-07-23 01:41:21,405 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 21:41:52] 2025-07-23 01:41:21,405 | INFO     | ***************************************
[2025-07-22 21:41:52] 2025-07-23 01:41:21,405 | INFO     | 
[2025-07-22 21:41:52] 2025-07-23 01:41:21,420 | INFO     | architecture information:
[2025-07-22 21:41:52] 2025-07-23 01:41:21,421 | INFO     | executing command: cat /etc/os-release
[2025-07-22 21:41:52] 2025-07-23 01:41:21,436 | INFO     | cat /etc/os-release:
[2025-07-22 21:41:52] NAME="CentOS Linux"
[2025-07-22 21:41:52] VERSION="7 (Core)"
[2025-07-22 21:41:52] ID="centos"
[2025-07-22 21:41:52] ID_LIKE="rhel fedora"
[2025-07-22 21:41:52] VERSION_ID="7"
[2025-07-22 21:41:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 21:41:52] ANSI_COLOR="0;31"
[2025-07-22 21:41:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 21:41:52] HOME_URL="https://www.centos.org/"
[2025-07-22 21:41:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 21:41:52] 
[2025-07-22 21:41:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 21:41:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 21:41:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 21:41:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 21:41:52] 
[2025-07-22 21:41:52] 2025-07-23 01:41:21,436 | INFO     | ***************************************
[2025-07-22 21:41:52] 2025-07-23 01:41:21,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 21:41:52] 2025-07-23 01:41:21,959 | INFO     | sufficient remaining disk space (75903270912 B)
[2025-07-22 21:41:52] 2025-07-23 01:41:21,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 21:41:52] 2025-07-23 01:41:21,959 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 21:41:52] 2025-07-23 01:41:21,959 | INFO     | update_server=False
[2025-07-22 21:41:52] 2025-07-23 01:41:21,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 21:41:52] 2025-07-23 01:41:22,030 | INFO     | all data control threads have been joined
[2025-07-22 21:41:52] 2025-07-23 01:41:22,385 | INFO     | all payload control threads have been joined
[2025-07-22 21:41:52] 2025-07-23 01:41:22,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:41:52] 2025-07-23 01:41:22,696 | INFO     | aborting loop
[2025-07-22 21:41:52] 2025-07-23 01:41:22,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 21:41:52] 2025-07-23 01:41:22,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 21:41:52] 2025-07-23 01:41:22,964 | INFO     | [job] retrieve thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,035 | INFO     | [data] control thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,169 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,340 | INFO     | all job control threads have been joined
[2025-07-22 21:41:52] 2025-07-23 01:41:23,390 | INFO     | [payload] control thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,700 | INFO     | [job] job monitor thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,781 | INFO     | [payload] failed_post thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:23,791 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:24,015 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:24,047 | INFO     | [job] validate thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:24,083 | INFO     | [payload] validate_post thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:24,253 | INFO     | [data] copytool_in thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:24,345 | INFO     | [job] control thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:24,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 21:41:52] 2025-07-23 01:41:24,746 | INFO     | [data] copytool_out thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:25,671 | INFO     | [job] queue monitor thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:26,948 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 21:41:52] 2025-07-23 01:41:27,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035484108608)>', '<ExcThread(monitor, started 140034816583424)>']
[2025-07-22 21:41:52] 2025-07-23 01:41:32,103 | INFO     | all workflow threads have been joined
[2025-07-22 21:41:52] 2025-07-23 01:41:32,103 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 21:41:52] 2025-07-23 01:41:32,104 | INFO     | traces error code: 0
[2025-07-22 21:41:52] 2025-07-23 01:41:32,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 21:41:52] 2025-07-23 01:41:51,720 | INFO     | PID=529204 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 21:41:52] 2025-07-23 01:41:51,721 | INFO     | .. there are 26 such processes running
[2025-07-22 21:41:52] 2025-07-23 01:41:51,722 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 21:41:52] 2025-07-23 01:41:51,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 21:41:52] 2025-07-23 01:41:51,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 21:41:52] 2025-07-23 01:41:51,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 21:41:52] 2025-07-23 01:41:51,722 | INFO     | [monitor] control thread has ended
[2025-07-22 21:41:52] 2025-07-23 01:41:51,896 [wrapper] ==== pilot stdout END ====
[2025-07-22 21:41:52] 2025-07-23 01:41:51,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 21:41:52] 2025-07-23 01:41:51,903 [wrapper] pilotpid: 529204
[2025-07-22 21:41:52] 2025-07-23 01:41:51,906 [wrapper] Pilot exit status: 0
[2025-07-22 21:41:52] 2025-07-23 01:41:51,918 [wrapper] pandaids: 6742271736
[2025-07-22 21:41:52] 2025-07-23 01:41:51,993 [wrapper] cleanup supervisor_pilot 1086971 529205
[2025-07-22 21:41:52] 2025-07-23 01:41:51,996 [wrapper] Test setup, not cleaning
[2025-07-22 21:41:52] 2025-07-23 01:41:51,999 [wrapper] apfmon messages muted
[2025-07-22 21:41:52] 2025-07-23 01:41:52,002 [wrapper] ==== wrapper stdout END ====
[2025-07-22 21:41:52] 2025-07-23 01:41:52,006 [wrapper] ==== wrapper stderr END ====
[2025-07-22 21:41:52]  *** Error codes and diagnostics ***
[2025-07-22 21:41:52]     "exeErrorCode": 0,
[2025-07-22 21:41:52]     "exeErrorDiag": "",
[2025-07-22 21:41:52]     "pilotErrorCode": 0,
[2025-07-22 21:41:52]     "pilotErrorDiag": "",
[2025-07-22 21:41:52]  *** Listing of results directory ***
[2025-07-22 21:41:52] total 603900
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 08:22 pilot3.tar.gz
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 08:43 queuedata.json
[2025-07-22 21:41:52] -rwx------. 1 boincer umatlas     36292 Jul 22 08:44 runpilot2-wrapper.sh
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas       100 Jul 22 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 21:41:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 19:00 run_atlas
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas       105 Jul 22 19:00 job.xml
[2025-07-22 21:41:52] -rw-r--r--. 2 boincer umatlas 328434878 Jul 22 19:00 EVNT.45697530._000212.pool.root.1
[2025-07-22 21:41:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 19:00 shared
[2025-07-22 21:41:52] -rw-r--r--. 2 boincer umatlas    542910 Jul 22 19:00 input.tar.gz
[2025-07-22 21:41:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 19:00 start_atlas.sh
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas         0 Jul 22 19:00 boinc_lockfile
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas      2614 Jul 22 19:00 pandaJob.out
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas    977736 Jul 22 19:00 agis_schedconf.cvmfs.json
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas   1593031 Jul 22 19:00 agis_ddmendpoints.agis.ALL.json
[2025-07-22 21:41:52] drwx------. 4 boincer umatlas      4096 Jul 22 19:00 pilot3
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas      6841 Jul 22 21:37 init_data.xml
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas 283580780 Jul 22 21:40 HITS.45697532._005366.pool.root.1
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas       529 Jul 22 21:40 boinc_task_state.xml
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas        95 Jul 22 21:40 pilot_heartbeat.json
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas      1042 Jul 22 21:41 memory_monitor_summary.json
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas    425840 Jul 22 21:41 log.45697532._005366.job.log.tgz.1
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas      7822 Jul 22 21:41 heartbeat.json
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas        27 Jul 22 21:41 wrapper_checkpoint.txt
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 21:41 boinc_mmap_file
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas       822 Jul 22 21:41 pilotlog.txt
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas    829491 Jul 22 21:41 log.45697532._005366.job.log.1
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas       357 Jul 22 21:41 output.list
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas       620 Jul 22 21:41 runtime_log
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas   1269760 Jul 22 21:41 result.tar.gz
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas       653 Jul 22 21:41 tPhLDmJXRy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbOJLDmCol3Em.diag
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas      8667 Jul 22 21:41 runtime_log.err
[2025-07-22 21:41:52] -rw-r--r--. 1 boincer umatlas     21323 Jul 22 21:41 stderr.txt
[2025-07-22 21:41:52] HITS file was successfully produced:
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas 283580780 Jul 22 21:40 shared/HITS.pool.root.1
[2025-07-22 21:41:52]  *** Contents of shared directory: ***
[2025-07-22 21:41:52] total 599472
[2025-07-22 21:41:52] -rw-r--r--. 2 boincer umatlas 328434878 Jul 22 19:00 ATLAS.root_0
[2025-07-22 21:41:52] -rw-r--r--. 2 boincer umatlas    542910 Jul 22 19:00 input.tar.gz
[2025-07-22 21:41:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 19:00 start_atlas.sh
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas 283580780 Jul 22 21:40 HITS.pool.root.1
[2025-07-22 21:41:52] -rw-------. 1 boincer umatlas   1269760 Jul 22 21:41 result.tar.gz
21:41:53 (523192): run_atlas exited; CPU time 59679.129392
21:41:53 (523192): called boinc_finish(0)

</stderr_txt>
]]>

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