Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:15:06 (819833): wrapper (7.7.26015): starting
12:15:06 (819833): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 12:15:06] Arguments: --nthreads 12
[2025-07-22 12:15:06] Threads: 12
[2025-07-22 12:15:06] Checking for CVMFS
[2025-07-22 12:15:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 12:15:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 12:15:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 12:15:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 12:15:07] 2.11.5.0 11050 18569 233592 148630 1 931 43900053 45568000 21429 130560 0 113791843 99.703 93989662 27040 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 12:15:07] CVMFS is ok
[2025-07-22 12:15:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 12:15:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 12:15:07] Further information can be found at the LHC@home message board.
[2025-07-22 12:15:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 12:15:07] Checking for apptainer binary...
[2025-07-22 12:15:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 12:15:07] Running /usr/bin/apptainer --version
[2025-07-22 12:15:07] apptainer version 1.4.1-1.el9
[2025-07-22 12:15:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 12:15:08] wns0033.triumf.lcg
[2025-07-22 12:15:08] apptainer works
[2025-07-22 12:15:08] Set ATHENA_PROC_NUMBER=12
[2025-07-22 12:15:08] Set ATHENA_CORE_NUMBER=12
[2025-07-22 12:15:08] Starting ATLAS job with PandaID=6741853678
[2025-07-22 12:15:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 12:20:18]  *** The last 200 lines of the pilot log: ***
[2025-07-22 12:20:18] 2025-07-22 19:19:45,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | WARNING  | wrong length of table data, x=[1753211801.0], y=[1201.0] (must be same and length>=4)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | ..............................
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . Timing measurements:
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . get job = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . initial setup = 3 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . payload setup = 15 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . stage-in = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . payload execution = 63 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . stage-out = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . log creation = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | ..............................
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741853678/pilotlog.txt
[2025-07-22 12:20:18] 2025-07-22 19:19:45,203 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 12:20:18] - Log from pilotlog.txt -
[2025-07-22 12:20:18] 2025-07-22 19:19:45,178 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741853678/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,179 | INFO     | extracted standard info from prmon json
[2025-07-22 12:20:18] 2025-07-22 19:19:45,179 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:20:18] 2025-07-22 19:19:45,179 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:20:18] 2025-07-22 19:19:45,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:20:18] 2025-07-22 19:19:45,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | WARNING  | wrong length of table data, x=[1753211801.0], y=[1201.0] (must be same and length>=4)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | ..............................
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . Timing measurements:
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . get job = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . initial setup = 3 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . payload setup = 15 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . stage-in = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . payload execution = 63 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . stage-out = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . log creation = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | ..............................
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741853678/pilotlog.txt
[2025-07-22 12:20:18] 2025-07-22 19:19:45,204 | WARNING  | 
[2025-07-22 12:20:18] [begin log extracts]
[2025-07-22 12:20:18] - Log from pilotlog.txt -
[2025-07-22 12:20:18] 2025-07-22 19:19:45,178 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741853678/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,179 | INFO     | extracted standard info from prmon json
[2025-07-22 12:20:18] 2025-07-22 19:19:45,179 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:20:18] 2025-07-22 19:19:45,179 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:20:18] 2025-07-22 19:19:45,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:20:18] 2025-07-22 19:19:45,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | WARNING  | wrong length of table data, x=[1753211801.0], y=[1201.0] (must be same and length>=4)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | could have reported an average CPU frequency of 2721 MHz (4 samples)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | ..............................
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . Timing measurements:
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . get job = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . initial setup = 3 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . payload setup = 15 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . stage-in = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . payload execution = 63 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . stage-out = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,184 | INFO     | . log creation = 0 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | ..............................
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:20:18] 2025-07-22 19:19:45,185 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741853678/pilotlog.txt
[2025-07-22 12:20:18] [end log extracts]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,204 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,205 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 12:20:18] 2025-07-22 19:19:45,360 | INFO     | 
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | job summary report
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | --------------------------------------------------
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | PanDA job id: 6741853678
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | task id: 45697490
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 12:17:23,493 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | pilot state: failed 
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | transexitcode: 65
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | exeerrorcode: 65
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | exitcode: 65
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | nevents: 0
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | neventsw: 0
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | pid: 830885
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | pgrp: 830885
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | corecount: 12
[2025-07-22 12:20:18] 2025-07-22 19:19:45,361 | INFO     | event service: False
[2025-07-22 12:20:18] 2025-07-22 19:19:45,362 | INFO     | sizes: {0: 2397328, 1: 2397527, 11: 2397527, 13: 2397817, 22: 2397873, 82: 2421135, 83: 2425615, 85: 2425615, 215: 2425781}
[2025-07-22 12:20:18] 2025-07-22 19:19:45,362 | INFO     | --------------------------------------------------
[2025-07-22 12:20:18] 2025-07-22 19:19:45,362 | INFO     | 
[2025-07-22 12:20:18] 2025-07-22 19:19:45,362 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | job 6741853678 has completed (purged errors)
[2025-07-22 12:20:18] 2025-07-22 19:19:45,407 | INFO     | overall cleanup function is called
[2025-07-22 12:20:18] 2025-07-22 19:19:45,612 | INFO     | PID=823429 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 12:20:18] 2025-07-22 19:19:45,612 | INFO     | .. there are 35 such processes running
[2025-07-22 12:20:18] 2025-07-22 19:19:46,416 | INFO     | --- collectZombieJob: --- 10, [830885]
[2025-07-22 12:20:18] 2025-07-22 19:19:46,416 | INFO     | zombie collector waiting for pid 830885
[2025-07-22 12:20:18] 2025-07-22 19:19:46,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 12:20:18] 2025-07-22 19:19:46,416 | INFO     | collected zombie processes
[2025-07-22 12:20:18] 2025-07-22 19:19:46,416 | INFO     | will attempt to kill all subprocesses of pid=830885
[2025-07-22 12:20:18] 2025-07-22 19:19:46,890 | INFO     | process IDs to be killed: [830885] (in reverse order)
[2025-07-22 12:20:18] 2025-07-22 19:19:47,103 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 12:20:18] 2025-07-22 19:19:47,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 12:20:18] 2025-07-22 19:19:47,130 | INFO     | did not find any defunct processes belonging to 830885
[2025-07-22 12:20:18] 2025-07-22 19:19:47,141 | INFO     | did not find any defunct processes belonging to 830885
[2025-07-22 12:20:18] 2025-07-22 19:19:47,142 | INFO     | ready for new job
[2025-07-22 12:20:18] 2025-07-22 19:19:47,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 12:20:18] 2025-07-22 19:19:47,143 | INFO     | ***************************************
[2025-07-22 12:20:18] 2025-07-22 19:19:47,143 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 12:20:18] 2025-07-22 19:19:47,143 | INFO     | ***************************************
[2025-07-22 12:20:18] 2025-07-22 19:19:47,143 | INFO     | 
[2025-07-22 12:20:18] 2025-07-22 19:19:47,145 | INFO     | architecture information:
[2025-07-22 12:20:18] 2025-07-22 19:19:47,146 | INFO     | executing command: cat /etc/os-release
[2025-07-22 12:20:18] 2025-07-22 19:19:47,160 | INFO     | cat /etc/os-release:
[2025-07-22 12:20:18] NAME="CentOS Linux"
[2025-07-22 12:20:18] VERSION="7 (Core)"
[2025-07-22 12:20:18] ID="centos"
[2025-07-22 12:20:18] ID_LIKE="rhel fedora"
[2025-07-22 12:20:18] VERSION_ID="7"
[2025-07-22 12:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 12:20:18] ANSI_COLOR="0;31"
[2025-07-22 12:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 12:20:18] HOME_URL="https://www.centos.org/"
[2025-07-22 12:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 12:20:18] 
[2025-07-22 12:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 12:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 12:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 12:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 12:20:18] 
[2025-07-22 12:20:18] 2025-07-22 19:19:47,160 | INFO     | ***************************************
[2025-07-22 12:20:18] 2025-07-22 19:19:47,664 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 12:20:18] 2025-07-22 19:19:47,693 | INFO     | sufficient remaining disk space (1888842940416 B)
[2025-07-22 12:20:18] 2025-07-22 19:19:47,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 12:20:18] 2025-07-22 19:19:47,693 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 12:20:18] 2025-07-22 19:19:47,693 | INFO     | update_server=False
[2025-07-22 12:20:18] 2025-07-22 19:19:47,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 12:20:18] 2025-07-22 19:19:47,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 12:20:18] 2025-07-22 19:19:47,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 12:20:18] 2025-07-22 19:19:47,938 | INFO     | all data control threads have been joined
[2025-07-22 12:20:18] 2025-07-22 19:19:48,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:20:18] 2025-07-22 19:19:48,155 | INFO     | aborting loop
[2025-07-22 12:20:18] 2025-07-22 19:19:48,164 | INFO     | all job control threads have been joined
[2025-07-22 12:20:18] 2025-07-22 19:19:48,700 | INFO     | [job] retrieve thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:48,830 | INFO     | [payload] failed_post thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:48,894 | INFO     | [job] validate thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:48,948 | INFO     | [data] control thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,014 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,064 | INFO     | all payload control threads have been joined
[2025-07-22 12:20:18] 2025-07-22 19:19:49,090 | INFO     | [payload] validate_post thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,113 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,161 | INFO     | [job] job monitor thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,170 | INFO     | [job] control thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,397 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,703 | INFO     | [data] copytool_out thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:49,827 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:50,018 | INFO     | [data] copytool_in thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:50,070 | INFO     | [payload] control thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:50,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:20:18] 2025-07-22 19:19:51,386 | INFO     | [job] queue monitor thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:51,932 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 12:20:18] 2025-07-22 19:19:53,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874130290496)>', '<ExcThread(monitor, started 139873419765504)>']
[2025-07-22 12:20:18] 2025-07-22 19:19:58,142 | INFO     | all workflow threads have been joined
[2025-07-22 12:20:18] 2025-07-22 19:19:58,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 12:20:18] 2025-07-22 19:19:58,142 | INFO     | traces error code: 0
[2025-07-22 12:20:18] 2025-07-22 19:19:58,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 12:20:18] 2025-07-22 19:20:16,716 | INFO     | 254s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-22 12:20:18] 2025-07-22 19:20:18,134 | INFO     | PID=823429 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 12:20:18] 2025-07-22 19:20:18,134 | INFO     | .. there are 35 such processes running
[2025-07-22 12:20:18] 2025-07-22 19:20:18,135 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 12:20:18] 2025-07-22 19:20:18,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 12:20:18] 2025-07-22 19:20:18,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 12:20:18] 2025-07-22 19:20:18,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 12:20:18] 2025-07-22 19:20:18,135 | INFO     | [monitor] control thread has ended
[2025-07-22 12:20:18] 2025-07-22 19:20:18,355 [wrapper] ==== pilot stdout END ====
[2025-07-22 12:20:18] 2025-07-22 19:20:18,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 12:20:18] 2025-07-22 19:20:18,359 [wrapper] pilotpid: 823429
[2025-07-22 12:20:18] 2025-07-22 19:20:18,360 [wrapper] Pilot exit status: 0
[2025-07-22 12:20:18] 2025-07-22 19:20:18,419 [wrapper] pandaids: 6741853678
[2025-07-22 12:20:18] 2025-07-22 19:20:18,536 [wrapper] cleanup supervisor_pilot  823436 823430
[2025-07-22 12:20:18] 2025-07-22 19:20:18,544 [wrapper] Test setup, not cleaning
[2025-07-22 12:20:18] 2025-07-22 19:20:18,551 [wrapper] apfmon messages muted
[2025-07-22 12:20:18] 2025-07-22 19:20:18,576 [wrapper] ==== wrapper stdout END ====
[2025-07-22 12:20:18] 2025-07-22 19:20:18,593 [wrapper] ==== wrapper stderr END ====
[2025-07-22 12:20:18]  *** Error codes and diagnostics ***
[2025-07-22 12:20:18]     "exeErrorCode": 65,
[2025-07-22 12:20:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:20:18]     "pilotErrorCode": 1305,
[2025-07-22 12:20:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:20:18]  *** Listing of results directory ***
[2025-07-22 12:20:18] total 338288
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc    530466 Jul 22 08:14 pilot3.tar.gz
[2025-07-22 12:20:18] -rwx------. 1 boinc boinc     36292 Jul 22 08:58 runpilot2-wrapper.sh
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc      5112 Jul 22 08:58 queuedata.json
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc       100 Jul 22 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 12:20:18] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 12:15 run_atlas
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc       105 Jul 22 12:15 job.xml
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc      6596 Jul 22 12:15 init_data.xml
[2025-07-22 12:20:18] -rw-r--r--. 2 boinc boinc 342328257 Jul 22 12:15 EVNT.45697488._000093.pool.root.1
[2025-07-22 12:20:18] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:15 start_atlas.sh
[2025-07-22 12:20:18] drwxrwx--x. 2 boinc boinc      4096 Jul 22 12:15 shared
[2025-07-22 12:20:18] -rw-r--r--. 2 boinc boinc    542888 Jul 22 12:15 input.tar.gz
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc         0 Jul 22 12:15 boinc_lockfile
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc      2589 Jul 22 12:15 pandaJob.out
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc    977712 Jul 22 12:15 agis_schedconf.cvmfs.json
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc   1593031 Jul 22 12:15 agis_ddmendpoints.agis.ALL.json
[2025-07-22 12:20:18] drwx------. 4 boinc boinc      4096 Jul 22 12:15 pilot3
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc       523 Jul 22 12:17 boinc_task_state.xml
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc       953 Jul 22 12:17 memory_monitor_summary.json
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc     21686 Jul 22 12:17 log.45697490._001837.job.log.tgz.1
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc        95 Jul 22 12:19 pilot_heartbeat.json
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc      8395 Jul 22 12:19 heartbeat.json
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc      8192 Jul 22 12:20 boinc_mmap_file
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc        22 Jul 22 12:20 wrapper_checkpoint.txt
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc       936 Jul 22 12:20 pilotlog.txt
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc     81149 Jul 22 12:20 log.45697490._001837.job.log.1
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc       188 Jul 22 12:20 output.list
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc       620 Jul 22 12:20 runtime_log
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc    122880 Jul 22 12:20 result.tar.gz
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc       647 Jul 22 12:20 ZeHODmwYUy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwiJLDmcZQW0n.diag
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc      8485 Jul 22 12:20 runtime_log.err
[2025-07-22 12:20:18] -rw-r--r--. 1 boinc boinc     21954 Jul 22 12:20 stderr.txt
[2025-07-22 12:20:18] No HITS result produced
[2025-07-22 12:20:18]  *** Contents of shared directory: ***
[2025-07-22 12:20:18] total 334980
[2025-07-22 12:20:18] -rw-r--r--. 2 boinc boinc 342328257 Jul 22 12:15 ATLAS.root_0
[2025-07-22 12:20:18] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:15 start_atlas.sh
[2025-07-22 12:20:18] -rw-r--r--. 2 boinc boinc    542888 Jul 22 12:15 input.tar.gz
[2025-07-22 12:20:18] -rw-------. 1 boinc boinc    122880 Jul 22 12:20 result.tar.gz
12:20:20 (819833): run_atlas exited; CPU time 24.715160
12:20:20 (819833): called boinc_finish(0)

</stderr_txt>
]]>

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