Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:22:41 (2181697): wrapper (7.7.26015): starting
12:22:41 (2181697): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 12:22:41] Arguments: --nthreads 12
[2025-07-22 12:22:41] Threads: 12
[2025-07-22 12:22:41] Checking for CVMFS
[2025-07-22 12:22:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 12:22:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 12:22:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 12:22:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 12:22:43] 2.11.5.0 11019 18579 210352 148631 3 294 44789085 45568000 14811 130560 0 119072863 99.689 105495986 19126 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 12:22:43] CVMFS is ok
[2025-07-22 12:22:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 12:22:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 12:22:43] Further information can be found at the LHC@home message board.
[2025-07-22 12:22:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 12:22:43] Checking for apptainer binary...
[2025-07-22 12:22:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 12:22:43] Running /usr/bin/apptainer --version
[2025-07-22 12:22:43] apptainer version 1.4.1-1.el9
[2025-07-22 12:22:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 12:22:43] wns0042.triumf.lcg
[2025-07-22 12:22:43] apptainer works
[2025-07-22 12:22:43] Set ATHENA_PROC_NUMBER=12
[2025-07-22 12:22:43] Set ATHENA_CORE_NUMBER=12
[2025-07-22 12:22:43] Starting ATLAS job with PandaID=6741853637
[2025-07-22 12:22:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 12:27:05]  *** The last 200 lines of the pilot log: ***
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | WARNING  | wrong length of table data, x=[1753212241.0], y=[1831.0] (must be same and length>=4)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | could have reported an average CPU frequency of 2435 MHz (4 samples)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | ..............................
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | . Timing measurements:
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | . get job = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . initial setup = 3 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . payload setup = 13 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . stage-in = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . payload execution = 36 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . stage-out = 1 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . log creation = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | ..............................
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741853637/pilotlog.txt
[2025-07-22 12:27:05] 2025-07-22 19:26:32,412 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 12:27:05] - Log from pilotlog.txt -
[2025-07-22 12:27:05] 2025-07-22 19:26:32,395 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741853637/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | INFO     | extracted standard info from prmon json
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | WARNING  | wrong length of table data, x=[1753212241.0], y=[1831.0] (must be same and length>=4)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | could have reported an average CPU frequency of 2435 MHz (4 samples)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | ..............................
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | . Timing measurements:
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | . get job = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . initial setup = 3 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . payload setup = 13 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . stage-in = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . payload execution = 36 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . stage-out = 1 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . log creation = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | ..............................
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741853637/pilotlog.txt
[2025-07-22 12:27:05] 2025-07-22 19:26:32,412 | WARNING  | 
[2025-07-22 12:27:05] [begin log extracts]
[2025-07-22 12:27:05] - Log from pilotlog.txt -
[2025-07-22 12:27:05] 2025-07-22 19:26:32,395 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741853637/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | INFO     | extracted standard info from prmon json
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:27:05] 2025-07-22 19:26:32,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | WARNING  | wrong length of table data, x=[1753212241.0], y=[1831.0] (must be same and length>=4)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | could have reported an average CPU frequency of 2435 MHz (4 samples)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | ..............................
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | . Timing measurements:
[2025-07-22 12:27:05] 2025-07-22 19:26:32,397 | INFO     | . get job = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . initial setup = 3 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . payload setup = 13 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . stage-in = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . payload execution = 36 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . stage-out = 1 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | . log creation = 0 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | ..............................
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 12:27:05] 2025-07-22 19:26:32,398 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741853637/pilotlog.txt
[2025-07-22 12:27:05] [end log extracts]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,413 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,413 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | 
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | job summary report
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | --------------------------------------------------
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | PanDA job id: 6741853637
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | task id: 45697490
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 12:24:20,172 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | pilot state: failed 
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | transexitcode: 65
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | exeerrorcode: 65
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,481 | INFO     | exitcode: 65
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | nevents: 0
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | neventsw: 0
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | pid: 2194747
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | pgrp: 2194747
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | corecount: 12
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | event service: False
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | sizes: {0: 2397448, 1: 2397448, 11: 2397476, 12: 2397766, 22: 2397794, 53: 2421189, 54: 2425481, 55: 2425509, 176: 2425675}
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | --------------------------------------------------
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | 
[2025-07-22 12:27:05] 2025-07-22 19:26:32,482 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 12:27:05] 2025-07-22 19:26:32,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 12:27:05] 2025-07-22 19:26:32,500 | INFO     | job 6741853637 has completed (purged errors)
[2025-07-22 12:27:05] 2025-07-22 19:26:32,500 | INFO     | overall cleanup function is called
[2025-07-22 12:27:05] 2025-07-22 19:26:33,508 | INFO     | --- collectZombieJob: --- 10, [2194747]
[2025-07-22 12:27:05] 2025-07-22 19:26:33,508 | INFO     | zombie collector waiting for pid 2194747
[2025-07-22 12:27:05] 2025-07-22 19:26:33,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 12:27:05] 2025-07-22 19:26:33,508 | INFO     | collected zombie processes
[2025-07-22 12:27:05] 2025-07-22 19:26:33,508 | INFO     | will attempt to kill all subprocesses of pid=2194747
[2025-07-22 12:27:05] 2025-07-22 19:26:34,228 | INFO     | process IDs to be killed: [2194747] (in reverse order)
[2025-07-22 12:27:05] 2025-07-22 19:26:34,394 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 12:27:05] 2025-07-22 19:26:34,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 12:27:05] 2025-07-22 19:26:34,420 | INFO     | did not find any defunct processes belonging to 2194747
[2025-07-22 12:27:05] 2025-07-22 19:26:34,427 | INFO     | did not find any defunct processes belonging to 2194747
[2025-07-22 12:27:05] 2025-07-22 19:26:34,428 | INFO     | ready for new job
[2025-07-22 12:27:05] 2025-07-22 19:26:34,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 12:27:05] 2025-07-22 19:26:34,429 | INFO     | ***************************************
[2025-07-22 12:27:05] 2025-07-22 19:26:34,429 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 12:27:05] 2025-07-22 19:26:34,429 | INFO     | ***************************************
[2025-07-22 12:27:05] 2025-07-22 19:26:34,429 | INFO     | 
[2025-07-22 12:27:05] 2025-07-22 19:26:34,431 | INFO     | architecture information:
[2025-07-22 12:27:05] 2025-07-22 19:26:34,432 | INFO     | executing command: cat /etc/os-release
[2025-07-22 12:27:05] 2025-07-22 19:26:34,446 | INFO     | cat /etc/os-release:
[2025-07-22 12:27:05] NAME="CentOS Linux"
[2025-07-22 12:27:05] VERSION="7 (Core)"
[2025-07-22 12:27:05] ID="centos"
[2025-07-22 12:27:05] ID_LIKE="rhel fedora"
[2025-07-22 12:27:05] VERSION_ID="7"
[2025-07-22 12:27:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 12:27:05] ANSI_COLOR="0;31"
[2025-07-22 12:27:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 12:27:05] HOME_URL="https://www.centos.org/"
[2025-07-22 12:27:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 12:27:05] 
[2025-07-22 12:27:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 12:27:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 12:27:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 12:27:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 12:27:05] 
[2025-07-22 12:27:05] 2025-07-22 19:26:34,446 | INFO     | ***************************************
[2025-07-22 12:27:05] 2025-07-22 19:26:34,951 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 12:27:05] 2025-07-22 19:26:35,036 | INFO     | sufficient remaining disk space (2049938817024 B)
[2025-07-22 12:27:05] 2025-07-22 19:26:35,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 12:27:05] 2025-07-22 19:26:35,037 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 12:27:05] 2025-07-22 19:26:35,037 | INFO     | update_server=False
[2025-07-22 12:27:05] 2025-07-22 19:26:35,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 12:27:05] 2025-07-22 19:26:35,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 12:27:05] 2025-07-22 19:26:35,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:27:05] 2025-07-22 19:26:35,105 | INFO     | aborting loop
[2025-07-22 12:27:05] 2025-07-22 19:26:35,886 | INFO     | all data control threads have been joined
[2025-07-22 12:27:05] 2025-07-22 19:26:36,043 | INFO     | [job] retrieve thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,111 | INFO     | [job] job monitor thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,229 | INFO     | all job control threads have been joined
[2025-07-22 12:27:05] 2025-07-22 19:26:36,244 | INFO     | [job] validate thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,244 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,289 | INFO     | all payload control threads have been joined
[2025-07-22 12:27:05] 2025-07-22 19:26:36,322 | INFO     | [data] copytool_in thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,360 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 12:27:05] 2025-07-22 19:26:36,488 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,652 | INFO     | [payload] validate_post thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:36,891 | INFO     | [data] control thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:37,235 | INFO     | [job] control thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:37,239 | INFO     | [payload] failed_post thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:37,295 | INFO     | [payload] control thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:37,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:27:05] 2025-07-22 19:26:38,457 | INFO     | [data] copytool_out thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:38,503 | INFO     | [job] queue monitor thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:39,046 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 12:27:05] 2025-07-22 19:26:40,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047740315456)>', '<ExcThread(monitor, started 140047063967488)>']
[2025-07-22 12:27:05] 2025-07-22 19:26:45,495 | INFO     | all workflow threads have been joined
[2025-07-22 12:27:05] 2025-07-22 19:26:45,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 12:27:05] 2025-07-22 19:26:45,495 | INFO     | traces error code: 0
[2025-07-22 12:27:05] 2025-07-22 19:26:45,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 12:27:05] 2025-07-22 19:27:05,237 | INFO     | PID=2185539 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 12:27:05] 2025-07-22 19:27:05,238 | INFO     | .. there are 21 such processes running
[2025-07-22 12:27:05] 2025-07-22 19:27:05,238 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 12:27:05] 2025-07-22 19:27:05,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 12:27:05] 2025-07-22 19:27:05,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 12:27:05] 2025-07-22 19:27:05,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 12:27:05] 2025-07-22 19:27:05,238 | INFO     | [monitor] control thread has ended
[2025-07-22 12:27:05] 2025-07-22 19:27:05,373 [wrapper] ==== pilot stdout END ====
[2025-07-22 12:27:05] 2025-07-22 19:27:05,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 12:27:05] 2025-07-22 19:27:05,379 [wrapper] pilotpid: 2185539
[2025-07-22 12:27:05] 2025-07-22 19:27:05,381 [wrapper] Pilot exit status: 0
[2025-07-22 12:27:05] 2025-07-22 19:27:05,426 [wrapper] pandaids: 6741853637
[2025-07-22 12:27:05] 2025-07-22 19:27:05,620 [wrapper] cleanup supervisor_pilot 2185545 2185540
[2025-07-22 12:27:05] 2025-07-22 19:27:05,623 [wrapper] Test setup, not cleaning
[2025-07-22 12:27:05] 2025-07-22 19:27:05,625 [wrapper] apfmon messages muted
[2025-07-22 12:27:05] 2025-07-22 19:27:05,627 [wrapper] ==== wrapper stdout END ====
[2025-07-22 12:27:05] 2025-07-22 19:27:05,629 [wrapper] ==== wrapper stderr END ====
[2025-07-22 12:27:05]  *** Error codes and diagnostics ***
[2025-07-22 12:27:05]     "exeErrorCode": 65,
[2025-07-22 12:27:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:27:05]     "pilotErrorCode": 1305,
[2025-07-22 12:27:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 12:27:05]  *** Listing of results directory ***
[2025-07-22 12:27:05] total 341412
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc    530466 Jul 22 08:14 pilot3.tar.gz
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc      5112 Jul 22 08:45 queuedata.json
[2025-07-22 12:27:05] -rwx------. 1 boinc boinc     36292 Jul 22 08:49 runpilot2-wrapper.sh
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc       100 Jul 22 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 12:27:05] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 12:22 run_atlas
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc       105 Jul 22 12:22 job.xml
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc      6597 Jul 22 12:22 init_data.xml
[2025-07-22 12:27:05] -rw-r--r--. 2 boinc boinc 345527729 Jul 22 12:22 EVNT.45697488._000091.pool.root.1
[2025-07-22 12:27:05] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:22 start_atlas.sh
[2025-07-22 12:27:05] drwxrwx--x. 2 boinc boinc      4096 Jul 22 12:22 shared
[2025-07-22 12:27:05] -rw-r--r--. 2 boinc boinc    542904 Jul 22 12:22 input.tar.gz
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc         0 Jul 22 12:22 boinc_lockfile
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc      2588 Jul 22 12:22 pandaJob.out
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc    977712 Jul 22 12:23 agis_schedconf.cvmfs.json
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc   1593031 Jul 22 12:23 agis_ddmendpoints.agis.ALL.json
[2025-07-22 12:27:05] drwx------. 4 boinc boinc      4096 Jul 22 12:23 pilot3
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc       522 Jul 22 12:24 boinc_task_state.xml
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc       961 Jul 22 12:24 memory_monitor_summary.json
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc     21223 Jul 22 12:24 log.45697490._001796.job.log.tgz.1
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc        95 Jul 22 12:26 pilot_heartbeat.json
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc      8392 Jul 22 12:26 heartbeat.json
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc      8192 Jul 22 12:27 boinc_mmap_file
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc        22 Jul 22 12:27 wrapper_checkpoint.txt
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc       823 Jul 22 12:27 pilotlog.txt
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc     77996 Jul 22 12:27 log.45697490._001796.job.log.1
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc       188 Jul 22 12:27 output.list
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc       620 Jul 22 12:27 runtime_log
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc    122880 Jul 22 12:27 result.tar.gz
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc      8485 Jul 22 12:27 runtime_log.err
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc       645 Jul 22 12:27 pq7NDmyPUy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmK8uKDm8v2jCn.diag
[2025-07-22 12:27:05] -rw-r--r--. 1 boinc boinc     21818 Jul 22 12:27 stderr.txt
[2025-07-22 12:27:05] No HITS result produced
[2025-07-22 12:27:05]  *** Contents of shared directory: ***
[2025-07-22 12:27:05] total 338104
[2025-07-22 12:27:05] -rw-r--r--. 2 boinc boinc 345527729 Jul 22 12:22 ATLAS.root_0
[2025-07-22 12:27:05] -rw-r--r--. 2 boinc boinc     15095 Jul 22 12:22 start_atlas.sh
[2025-07-22 12:27:05] -rw-r--r--. 2 boinc boinc    542904 Jul 22 12:22 input.tar.gz
[2025-07-22 12:27:05] -rw-------. 1 boinc boinc    122880 Jul 22 12:27 result.tar.gz
12:27:07 (2181697): run_atlas exited; CPU time 23.997195
12:27:07 (2181697): called boinc_finish(0)

</stderr_txt>
]]>

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