Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:09:15 (2657): wrapper (7.7.26015): starting
10:09:15 (2657): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 10:09:15] Arguments: --nthreads 8
[2025-07-23 10:09:15] Threads: 8
[2025-07-23 10:09:15] Checking for CVMFS
[2025-07-23 10:09:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 10:09:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 10:09:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 10:09:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 10:09:19] 2.11.2.0 3966 103497 138012 148650 2 291 19052892 25165824 3142 130560 0 75534753 99.856 47727237 3373 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 10:09:19] CVMFS is ok
[2025-07-23 10:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 10:11:30] Checking for apptainer binary...
[2025-07-23 10:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 10:11:30] Running /usr/bin/apptainer --version
[2025-07-23 10:11:30] apptainer version 1.3.2-1.el7
[2025-07-23 10:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 10:11:31] cg-vwn439.simple-grid.lan
[2025-07-23 10:11:31] apptainer works
[2025-07-23 10:11:31] Set ATHENA_PROC_NUMBER=8
[2025-07-23 10:11:31] Set ATHENA_CORE_NUMBER=8
[2025-07-23 10:11:31] Starting ATLAS job with PandaID=6741760452
[2025-07-23 10:11:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 17:29:18]  *** The last 200 lines of the pilot log: ***
[2025-07-23 17:29:18] 2025-07-23 14:33:53,507 | INFO     | fitting pss+swap vs Time
[2025-07-23 17:29:18] 2025-07-23 14:33:53,508 | INFO     | sum of square deviations: 16221466937.5
[2025-07-23 17:29:18] 2025-07-23 14:33:53,513 | INFO     | sum of deviations: 13619197086.000126
[2025-07-23 17:29:18] 2025-07-23 14:33:53,513 | INFO     | mean x: 1753269742.5
[2025-07-23 17:29:18] 2025-07-23 14:33:53,513 | INFO     | mean y: 2542827.7005347596
[2025-07-23 17:29:18] 2025-07-23 14:33:53,513 | INFO     | -- intersect: -1469464991.3227804
[2025-07-23 17:29:18] 2025-07-23 14:33:53,514 | INFO     | intersect: -1469464991.3227804
[2025-07-23 17:29:18] 2025-07-23 14:33:53,514 | INFO     | chi2: 3.23491023903951
[2025-07-23 17:29:18] 2025-07-23 14:33:53,515 | INFO     | sum of square deviations: 15579529320.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,520 | INFO     | sum of deviations: 65709679398.99998
[2025-07-23 17:29:18] 2025-07-23 14:33:53,520 | INFO     | mean x: 1753269590.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,520 | INFO     | mean y: 2555102.216802168
[2025-07-23 17:29:18] 2025-07-23 14:33:53,520 | INFO     | -- intersect: -7392198634.728322
[2025-07-23 17:29:18] 2025-07-23 14:33:53,521 | INFO     | intersect: -7392198634.728322
[2025-07-23 17:29:18] 2025-07-23 14:33:53,521 | INFO     | chi2: 1.5692034456660373
[2025-07-23 17:29:18] 2025-07-23 14:33:53,521 | INFO     | current chi2=1.5692034456660373 (change=51.49159235614662 %)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,522 | INFO     | sum of square deviations: 14954754815.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,527 | INFO     | sum of deviations: 64552709967.000015
[2025-07-23 17:29:18] 2025-07-23 14:33:53,527 | INFO     | mean x: 1753269437.5
[2025-07-23 17:29:18] 2025-07-23 14:33:53,527 | INFO     | mean y: 2554819.8021978023
[2025-07-23 17:29:18] 2025-07-23 14:33:53,527 | INFO     | -- intersect: -7565492593.413969
[2025-07-23 17:29:18] 2025-07-23 14:33:53,527 | INFO     | intersect: -7565492593.413969
[2025-07-23 17:29:18] 2025-07-23 14:33:53,528 | INFO     | chi2: 1.5695020763384142
[2025-07-23 17:29:18] 2025-07-23 14:33:53,528 | INFO     | current chi2=1.5695020763384142 (change=-0.019030717349090873 %)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,528 | INFO     | right removable region: 363
[2025-07-23 17:29:18] 2025-07-23 14:33:53,529 | INFO     | sum of square deviations: 15579529320.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,534 | INFO     | sum of deviations: -49650410333.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,534 | INFO     | mean x: 1753269895.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,534 | INFO     | mean y: 2557784.8428184283
[2025-07-23 17:29:18] 2025-07-23 14:33:53,534 | INFO     | -- intersect: 5590054552.122936
[2025-07-23 17:29:18] 2025-07-23 14:33:53,535 | INFO     | intersect: 5590054552.122936
[2025-07-23 17:29:18] 2025-07-23 14:33:53,535 | INFO     | chi2: 1.7701706204882655
[2025-07-23 17:29:18] 2025-07-23 14:33:53,535 | INFO     | current chi2=1.7701706204882655 (change=45.279142551607436 %)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,536 | INFO     | sum of square deviations: 14954754815.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,541 | INFO     | sum of deviations: -62809314259.50001
[2025-07-23 17:29:18] 2025-07-23 14:33:53,541 | INFO     | mean x: 1753270047.5
[2025-07-23 17:29:18] 2025-07-23 14:33:53,541 | INFO     | mean y: 2560982.5027472526
[2025-07-23 17:29:18] 2025-07-23 14:33:53,541 | INFO     | -- intersect: 7366218277.956441
[2025-07-23 17:29:18] 2025-07-23 14:33:53,541 | INFO     | intersect: 7366218277.956441
[2025-07-23 17:29:18] 2025-07-23 14:33:53,542 | INFO     | chi2: 1.704972470705914
[2025-07-23 17:29:18] 2025-07-23 14:33:53,542 | INFO     | current chi2=1.704972470705914 (change=3.6831562465073517 %)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,542 | INFO     | left removable region: 20
[2025-07-23 17:29:18] 2025-07-23 14:33:53,546 | INFO     | sum of square deviations: 12512874612.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,550 | INFO     | sum of deviations: -12139868823.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,551 | INFO     | mean x: 1753270017.0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,551 | INFO     | mean y: 2574064.416909621
[2025-07-23 17:29:18] 2025-07-23 14:33:53,551 | INFO     | -- intersect: 1703579523.0080886
[2025-07-23 17:29:18] 2025-07-23 14:33:53,551 | INFO     | intersect: 1703579523.0080886
[2025-07-23 17:29:18] 2025-07-23 14:33:53,552 | INFO     | chi2: 0.013008559400644461
[2025-07-23 17:29:18] 2025-07-23 14:33:53,552 | INFO     | -- intersect: 1703579523.0080886
[2025-07-23 17:29:18] 2025-07-23 14:33:53,552 | INFO     | current memory leak: -0.97 B/s (using 343 data points, chi2=0.01)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,553 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,556 | INFO     | ..............................
[2025-07-23 17:29:18] 2025-07-23 14:33:53,556 | INFO     | . Timing measurements:
[2025-07-23 17:29:18] 2025-07-23 14:33:53,556 | INFO     | . get job = 0 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,556 | INFO     | . initial setup = 2 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,556 | INFO     | . payload setup = 11 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,557 | INFO     | . stage-in = 0 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,557 | INFO     | . payload execution = 22782 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,557 | INFO     | . stage-out = 4 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,557 | INFO     | . log creation = 1 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,557 | INFO     | ..............................
[2025-07-23 17:29:18] 2025-07-23 14:33:53,716 | INFO     | 
[2025-07-23 17:29:18] 2025-07-23 14:33:53,716 | INFO     | job summary report
[2025-07-23 17:29:18] 2025-07-23 14:33:53,716 | INFO     | --------------------------------------------------
[2025-07-23 17:29:18] 2025-07-23 14:33:53,716 | INFO     | PanDA job id: 6741760452
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | task id: 45697472
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | errors: (none)
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | pilot state: finished 
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | transexitcode: 0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | exeerrorcode: 0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | exeerrordiag: 
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | exitcode: 0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | exitmsg: OK
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | cpuconsumptiontime: 85223 s
[2025-07-23 17:29:18] 2025-07-23 14:33:53,717 | INFO     | nevents: 400
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | neventsw: 0
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | pid: 13183
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | pgrp: 13183
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | corecount: 8
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | event service: False
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | sizes: {0: 2397310, 1: 2397509, 9: 2397771, 12: 2397799, 22798: 2431524, 22802: 2440706, 22900: 2440844}
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | --------------------------------------------------
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | 
[2025-07-23 17:29:18] 2025-07-23 14:33:53,718 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-23 17:29:18] 2025-07-23 14:33:54,088 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 17:29:18] 2025-07-23 14:33:54,091 | INFO     | job 6741760452 has completed (purged errors)
[2025-07-23 17:29:18] 2025-07-23 14:33:54,092 | INFO     | overall cleanup function is called
[2025-07-23 17:29:18] 2025-07-23 14:33:55,101 | INFO     | --- collectZombieJob: --- 10, [13183]
[2025-07-23 17:29:18] 2025-07-23 14:33:55,101 | INFO     | zombie collector waiting for pid 13183
[2025-07-23 17:29:18] 2025-07-23 14:33:55,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 17:29:18] 2025-07-23 14:33:55,101 | INFO     | collected zombie processes
[2025-07-23 17:29:18] 2025-07-23 14:33:55,102 | INFO     | will attempt to kill all subprocesses of pid=13183
[2025-07-23 17:29:18] 2025-07-23 14:33:55,219 | INFO     | process IDs to be killed: [13183] (in reverse order)
[2025-07-23 17:29:18] 2025-07-23 14:33:55,829 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 17:29:18] 2025-07-23 14:33:55,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 17:29:18] 2025-07-23 14:33:55,832 | INFO     | did not find any defunct processes belonging to 13183
[2025-07-23 17:29:18] 2025-07-23 14:33:55,835 | INFO     | did not find any defunct processes belonging to 13183
[2025-07-23 17:29:18] 2025-07-23 14:33:55,835 | INFO     | ready for new job
[2025-07-23 17:29:18] 2025-07-23 14:33:55,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 17:29:18] 2025-07-23 14:33:55,838 | INFO     | ***************************************
[2025-07-23 17:29:18] 2025-07-23 14:33:55,842 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 17:29:18] 2025-07-23 14:33:55,842 | INFO     | ***************************************
[2025-07-23 17:29:18] 2025-07-23 14:33:55,842 | INFO     | 
[2025-07-23 17:29:18] 2025-07-23 14:33:55,843 | INFO     | pilot is running in a VM
[2025-07-23 17:29:18] 2025-07-23 14:33:55,843 | INFO     | architecture information:
[2025-07-23 17:29:18] 2025-07-23 14:33:55,849 | INFO     | executing command: cat /etc/os-release
[2025-07-23 17:29:18] 2025-07-23 14:33:56,036 | INFO     | cat /etc/os-release:
[2025-07-23 17:29:18] NAME="CentOS Linux"
[2025-07-23 17:29:18] VERSION="7 (Core)"
[2025-07-23 17:29:18] ID="centos"
[2025-07-23 17:29:18] ID_LIKE="rhel fedora"
[2025-07-23 17:29:18] VERSION_ID="7"
[2025-07-23 17:29:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 17:29:18] ANSI_COLOR="0;31"
[2025-07-23 17:29:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 17:29:18] HOME_URL="https://www.centos.org/"
[2025-07-23 17:29:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 17:29:18] 
[2025-07-23 17:29:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 17:29:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 17:29:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 17:29:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 17:29:18] 
[2025-07-23 17:29:18] 2025-07-23 14:33:56,037 | INFO     | ***************************************
[2025-07-23 17:29:18] 2025-07-23 14:33:56,540 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-23 17:29:18] 2025-07-23 14:33:56,702 | INFO     | sufficient remaining disk space (496358129664 B)
[2025-07-23 17:29:18] 2025-07-23 14:33:56,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 17:29:18] 2025-07-23 14:33:56,702 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 17:29:18] 2025-07-23 14:33:56,703 | INFO     | update_server=False
[2025-07-23 17:29:18] 2025-07-23 14:33:56,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 17:29:18] 2025-07-23 14:33:56,992 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 17:29:18] 2025-07-23 14:33:56,992 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 17:29:18] 2025-07-23 14:33:56,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:29:18] 2025-07-23 14:33:56,993 | INFO     | will abort loop
[2025-07-23 17:29:18] 2025-07-23 14:33:57,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 17:29:18] 2025-07-23 14:33:57,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 17:29:18] 2025-07-23 14:33:57,392 | INFO     | all job control threads have been joined
[2025-07-23 17:29:18] 2025-07-23 14:33:57,610 | INFO     | all data control threads have been joined
[2025-07-23 17:29:18] 2025-07-23 14:33:57,708 | INFO     | [job] retrieve thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:57,746 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:57,998 | INFO     | [job] job monitor thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,074 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,109 | INFO     | [data] copytool_in thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,166 | INFO     | all payload control threads have been joined
[2025-07-23 17:29:18] 2025-07-23 14:33:58,307 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,398 | INFO     | [job] control thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,616 | INFO     | [data] control thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:29:18] 2025-07-23 14:33:58,939 | INFO     | [job] validate thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:58,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:59,023 | INFO     | [data] copytool_out thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:59,063 | INFO     | [payload] failed_post thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:59,063 | INFO     | [payload] validate_post thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:59,172 | INFO     | [payload] control thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:33:59,737 | INFO     | [job] queue monitor thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:34:01,114 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 17:29:18] 2025-07-23 14:34:01,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039388813120)>', '<ExcThread(monitor, started 140038809577216)>']
[2025-07-23 17:29:18] 2025-07-23 14:34:06,860 | INFO     | all workflow threads have been joined
[2025-07-23 17:29:18] 2025-07-23 14:34:06,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 17:29:18] 2025-07-23 14:34:06,860 | INFO     | traces error code: 0
[2025-07-23 17:29:18] 2025-07-23 14:34:06,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 17:29:18] 2025-07-23 14:34:25,475 | INFO     | PID=6642 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-23 17:29:18] 2025-07-23 14:34:25,475 | INFO     | .. there are 9 such processes running
[2025-07-23 17:29:18] 2025-07-23 14:34:25,476 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 17:29:18] 2025-07-23 14:34:25,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 17:29:18] 2025-07-23 14:34:25,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 17:29:18] 2025-07-23 14:34:25,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 17:29:18] 2025-07-23 14:34:25,476 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 17:29:18] 2025-07-23 14:34:25,476 | INFO     | [monitor] control thread has ended
[2025-07-23 17:29:18] 2025-07-23 14:34:25,659 [wrapper] ==== pilot stdout END ====
[2025-07-23 17:29:18] 2025-07-23 14:34:25,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 17:29:18] 2025-07-23 14:34:25,851 [wrapper] pilotpid: 6642
[2025-07-23 17:29:18] 2025-07-23 14:34:25,908 [wrapper] Pilot exit status: 0
[2025-07-23 17:29:18] 2025-07-23 14:34:26,359 [wrapper] pandaids: 6741760452
[2025-07-23 17:29:18] 2025-07-23 14:34:27,206 [wrapper] cleanup supervisor_pilot  1388 6643
[2025-07-23 17:29:18] 2025-07-23 14:34:27,298 [wrapper] Test setup, not cleaning
[2025-07-23 17:29:18] 2025-07-23 14:34:27,336 [wrapper] apfmon messages muted
[2025-07-23 17:29:18] 2025-07-23 14:34:27,460 [wrapper] ==== wrapper stdout END ====
[2025-07-23 17:29:18] 2025-07-23 14:34:27,511 [wrapper] ==== wrapper stderr END ====
[2025-07-23 17:29:18]  *** Error codes and diagnostics ***
[2025-07-23 17:29:18]     "exeErrorCode": 0,
[2025-07-23 17:29:18]     "exeErrorDiag": "",
[2025-07-23 17:29:18]     "pilotErrorCode": 0,
[2025-07-23 17:29:18]     "pilotErrorDiag": "",
[2025-07-23 17:29:18]  *** Listing of results directory ***
[2025-07-23 17:29:18] total 610744
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc    530466 Jul 22 10:26 pilot3.tar.gz
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc      5112 Jul 22 10:35 queuedata.json
[2025-07-23 17:29:18] -rwx------. 1 boinc boinc     36292 Jul 22 10:39 runpilot2-wrapper.sh
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc       100 Jul 23 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 17:29:18] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 10:09 run_atlas
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc       105 Jul 23 10:09 job.xml
[2025-07-23 17:29:18] -rw-r--r--. 2 boinc boinc 329755298 Jul 23 10:09 EVNT.45697470._000055.pool.root.1
[2025-07-23 17:29:18] drwxrwx--x. 2 boinc boinc        68 Jul 23 10:09 shared
[2025-07-23 17:29:18] -rw-r--r--. 2 boinc boinc    542903 Jul 23 10:09 input.tar.gz
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc      6391 Jul 23 10:09 init_data.xml
[2025-07-23 17:29:18] -rw-r--r--. 2 boinc boinc     15095 Jul 23 10:09 start_atlas.sh
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc         0 Jul 23 10:09 boinc_lockfile
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc      2610 Jul 23 10:11 pandaJob.out
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc    977736 Jul 23 10:11 agis_schedconf.cvmfs.json
[2025-07-23 17:29:18] drwx------. 4 boinc boinc      4096 Jul 23 10:11 pilot3
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc 286923282 Jul 23 16:30 HITS.45697472._001371.pool.root.1
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc       531 Jul 23 16:31 boinc_task_state.xml
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc      1018 Jul 23 16:32 memory_monitor_summary.json
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc   1593041 Jul 23 16:32 agis_ddmendpoints.agis.ALL.json
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc    472393 Jul 23 16:32 log.45697472._001371.job.log.tgz.1
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc      7774 Jul 23 16:33 heartbeat.json
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc        95 Jul 23 16:34 pilot_heartbeat.json
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc       889 Jul 23 16:34 pilotlog.txt
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc   1959022 Jul 23 16:34 log.45697472._001371.job.log.1
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc       357 Jul 23 16:34 output.list
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc       620 Jul 23 16:34 runtime_log
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc   2447360 Jul 23 16:34 result.tar.gz
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc      8660 Jul 23 16:34 runtime_log.err
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc       658 Jul 23 16:34 ACoMDm5hNy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdguKDmDUV2Em.diag
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc      8192 Jul 23 17:29 boinc_mmap_file
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc        28 Jul 23 17:29 wrapper_checkpoint.txt
[2025-07-23 17:29:18] -rw-r--r--. 1 boinc boinc     20585 Jul 23 17:29 stderr.txt
[2025-07-23 17:29:18] HITS file was successfully produced:
[2025-07-23 17:29:18] -rw-------. 1 boinc boinc 286923282 Jul 23 16:30 shared/HITS.pool.root.1
[2025-07-23 17:29:18]  *** Contents of shared directory: ***
[2025-07-23 17:29:19] total 605168
[2025-07-23 17:29:19] -rw-r--r--. 2 boinc boinc 329755298 Jul 23 10:09 ATLAS.root_0
[2025-07-23 17:29:19] -rw-r--r--. 2 boinc boinc    542903 Jul 23 10:09 input.tar.gz
[2025-07-23 17:29:19] -rw-r--r--. 2 boinc boinc     15095 Jul 23 10:09 start_atlas.sh
[2025-07-23 17:29:19] -rw-------. 1 boinc boinc 286923282 Jul 23 16:30 HITS.pool.root.1
[2025-07-23 17:29:19] -rw-------. 1 boinc boinc   2447360 Jul 23 16:34 result.tar.gz
17:29:20 (2657): run_atlas exited; CPU time 85535.418414
17:29:20 (2657): called boinc_finish(0)

</stderr_txt>
]]>

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