Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:36:49 (985639): wrapper (7.7.26015): starting
12:36:49 (985639): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 12:36:49] Arguments: --nthreads 12
[2025-07-24 12:36:49] Threads: 12
[2025-07-24 12:36:49] Checking for CVMFS
[2025-07-24 12:36:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 12:36:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 12:36:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 12:36:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 12:36:50] 2.13.1.0 40618 3087 56072 148699 1 56 2638847 4096000 912 130560 0 2378814 99.771 527463 182 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-24 12:36:50] CVMFS is ok
[2025-07-24 12:36:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 12:36:50] Checking for apptainer binary...
[2025-07-24 12:36:50] apptainer is not installed, using version from CVMFS
[2025-07-24 12:36:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 12:36:50] gg3250
[2025-07-24 12:36:50] apptainer works
[2025-07-24 12:36:50] Set ATHENA_PROC_NUMBER=12
[2025-07-24 12:36:50] Set ATHENA_CORE_NUMBER=12
[2025-07-24 12:36:50] Starting ATLAS job with PandaID=6741800740
[2025-07-24 12:36:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 16:47:40]  *** The last 200 lines of the pilot log: ***
[2025-07-24 16:47:40] 2025-07-24 16:47:09,452 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 16:47:40] 2025-07-24 16:47:09,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 16:47:40] 2025-07-24 16:47:09,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 16:47:40] 2025-07-24 16:47:09,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 16:47:40] 2025-07-24 16:47:09,456 | INFO     | fitting pss+swap vs Time
[2025-07-24 16:47:40] 2025-07-24 16:47:09,456 | INFO     | sum of square deviations: 4616114457.5
[2025-07-24 16:47:40] 2025-07-24 16:47:09,457 | INFO     | sum of deviations: 6780443348.999996
[2025-07-24 16:47:40] 2025-07-24 16:47:09,458 | INFO     | mean x: 1753368105.5
[2025-07-24 16:47:40] 2025-07-24 16:47:09,458 | INFO     | mean y: 2756841.8455284555
[2025-07-24 16:47:40] 2025-07-24 16:47:09,458 | INFO     | -- intersect: -2572702068.1843686
[2025-07-24 16:47:40] 2025-07-24 16:47:09,458 | INFO     | intersect: -2572702068.1843686
[2025-07-24 16:47:40] 2025-07-24 16:47:09,458 | INFO     | chi2: 1.8847884752650534
[2025-07-24 16:47:40] 2025-07-24 16:47:09,459 | INFO     | sum of square deviations: 4340323240.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,460 | INFO     | sum of deviations: 23785297449.000004
[2025-07-24 16:47:40] 2025-07-24 16:47:09,460 | INFO     | mean x: 1753367953.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,460 | INFO     | mean y: 2766087.738589212
[2025-07-24 16:47:40] 2025-07-24 16:47:09,460 | INFO     | -- intersect: -9605822027.382824
[2025-07-24 16:47:40] 2025-07-24 16:47:09,460 | INFO     | intersect: -9605822027.382824
[2025-07-24 16:47:40] 2025-07-24 16:47:09,461 | INFO     | chi2: 1.1783271165361808
[2025-07-24 16:47:40] 2025-07-24 16:47:09,461 | INFO     | current chi2=1.1783271165361808 (change=37.482262227305085 %)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,461 | INFO     | sum of square deviations: 4075741535.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,462 | INFO     | sum of deviations: 23320851927.999996
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | mean x: 1753367800.5
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | mean y: 2765820.245762712
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | -- intersect: -10029771939.973995
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | intersect: -10029771939.973995
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | chi2: 1.1787876015168397
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | current chi2=1.1787876015168397 (change=-0.03907955390286831 %)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,463 | INFO     | right removable region: 235
[2025-07-24 16:47:40] 2025-07-24 16:47:09,464 | INFO     | sum of square deviations: 4340323240.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,465 | INFO     | sum of deviations: -24802039959.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,465 | INFO     | mean x: 1753368258.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,465 | INFO     | mean y: 2774109.539419087
[2025-07-24 16:47:40] 2025-07-24 16:47:09,465 | INFO     | -- intersect: 10022099213.48219
[2025-07-24 16:47:40] 2025-07-24 16:47:09,465 | INFO     | intersect: 10022099213.48219
[2025-07-24 16:47:40] 2025-07-24 16:47:09,466 | INFO     | chi2: 0.766302755749783
[2025-07-24 16:47:40] 2025-07-24 16:47:09,466 | INFO     | current chi2=0.766302755749783 (change=59.342771573238764 %)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,466 | INFO     | sum of square deviations: 4075741535.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,467 | INFO     | sum of deviations: -20449409176.00001
[2025-07-24 16:47:40] 2025-07-24 16:47:09,467 | INFO     | mean x: 1753368410.5
[2025-07-24 16:47:40] 2025-07-24 16:47:09,468 | INFO     | mean y: 2771595.338983051
[2025-07-24 16:47:40] 2025-07-24 16:47:09,468 | INFO     | -- intersect: 8800029162.994646
[2025-07-24 16:47:40] 2025-07-24 16:47:09,468 | INFO     | intersect: 8800029162.994646
[2025-07-24 16:47:40] 2025-07-24 16:47:09,468 | INFO     | chi2: 0.7603302318674161
[2025-07-24 16:47:40] 2025-07-24 16:47:09,468 | INFO     | current chi2=0.7603302318674161 (change=0.7793948067592604 %)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,468 | INFO     | left removable region: 20
[2025-07-24 16:47:40] 2025-07-24 16:47:09,469 | INFO     | sum of square deviations: 3081657780.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,470 | INFO     | sum of deviations: 7004817636.000002
[2025-07-24 16:47:40] 2025-07-24 16:47:09,470 | INFO     | mean x: 1753368380.0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,470 | INFO     | mean y: 2774531.306976744
[2025-07-24 16:47:40] 2025-07-24 16:47:09,470 | INFO     | -- intersect: -3982750996.653741
[2025-07-24 16:47:40] 2025-07-24 16:47:09,470 | INFO     | intersect: -3982750996.653741
[2025-07-24 16:47:40] 2025-07-24 16:47:09,470 | INFO     | chi2: 0.007857284956518874
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | -- intersect: -3982750996.653741
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | current memory leak: 2.27 B/s (using 215 data points, chi2=0.01)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | could have reported an average CPU frequency of 3545 MHz (12 samples)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | ..............................
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | . Timing measurements:
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | . get job = 0 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | . initial setup = 1 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,471 | INFO     | . payload setup = 3 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,472 | INFO     | . stage-in = 0 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,472 | INFO     | . payload execution = 14956 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,472 | INFO     | . stage-out = 2 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,472 | INFO     | . log creation = 0 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,472 | INFO     | ..............................
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | 
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | job summary report
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | --------------------------------------------------
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | PanDA job id: 6741800740
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | task id: 45697532
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | errors: (none)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 16:47:40] 2025-07-24 16:47:09,554 | INFO     | pilot state: finished 
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | transexitcode: 0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | exeerrorcode: 0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | exeerrordiag: 
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | exitcode: 0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | exitmsg: OK
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | cpuconsumptiontime: 56138 s
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | nevents: 400
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | neventsw: 0
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | pid: 995786
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | pgrp: 995786
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | corecount: 12
[2025-07-24 16:47:40] 2025-07-24 16:47:09,555 | INFO     | event service: False
[2025-07-24 16:47:40] 2025-07-24 16:47:09,556 | INFO     | sizes: {0: 2397500, 1: 2397762, 10: 2397790, 14964: 2428919, 14968: 2437974, 14970: 2438030, 15002: 2438352}
[2025-07-24 16:47:40] 2025-07-24 16:47:09,556 | INFO     | --------------------------------------------------
[2025-07-24 16:47:40] 2025-07-24 16:47:09,556 | INFO     | 
[2025-07-24 16:47:40] 2025-07-24 16:47:09,556 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 16:47:40] 2025-07-24 16:47:09,571 | INFO     | job 6741800740 has completed (purged errors)
[2025-07-24 16:47:40] 2025-07-24 16:47:09,571 | INFO     | overall cleanup function is called
[2025-07-24 16:47:40] 2025-07-24 16:47:10,578 | INFO     | --- collectZombieJob: --- 10, [995786]
[2025-07-24 16:47:40] 2025-07-24 16:47:10,578 | INFO     | zombie collector waiting for pid 995786
[2025-07-24 16:47:40] 2025-07-24 16:47:10,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 16:47:40] 2025-07-24 16:47:10,578 | INFO     | collected zombie processes
[2025-07-24 16:47:40] 2025-07-24 16:47:10,578 | INFO     | will attempt to kill all subprocesses of pid=995786
[2025-07-24 16:47:40] 2025-07-24 16:47:10,636 | INFO     | process IDs to be killed: [995786] (in reverse order)
[2025-07-24 16:47:40] 2025-07-24 16:47:10,661 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 16:47:40] 2025-07-24 16:47:10,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 16:47:40] 2025-07-24 16:47:10,662 | INFO     | did not find any defunct processes belonging to 995786
[2025-07-24 16:47:40] 2025-07-24 16:47:10,664 | INFO     | did not find any defunct processes belonging to 995786
[2025-07-24 16:47:40] 2025-07-24 16:47:10,664 | INFO     | ready for new job
[2025-07-24 16:47:40] 2025-07-24 16:47:10,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 16:47:40] 2025-07-24 16:47:10,665 | INFO     | ***************************************
[2025-07-24 16:47:40] 2025-07-24 16:47:10,665 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 16:47:40] 2025-07-24 16:47:10,666 | INFO     | ***************************************
[2025-07-24 16:47:40] 2025-07-24 16:47:10,666 | INFO     | 
[2025-07-24 16:47:40] 2025-07-24 16:47:10,686 | INFO     | architecture information:
[2025-07-24 16:47:40] 2025-07-24 16:47:10,686 | INFO     | executing command: cat /etc/os-release
[2025-07-24 16:47:40] 2025-07-24 16:47:10,695 | INFO     | cat /etc/os-release:
[2025-07-24 16:47:40] NAME="CentOS Linux"
[2025-07-24 16:47:40] VERSION="7 (Core)"
[2025-07-24 16:47:40] ID="centos"
[2025-07-24 16:47:40] ID_LIKE="rhel fedora"
[2025-07-24 16:47:40] VERSION_ID="7"
[2025-07-24 16:47:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 16:47:40] ANSI_COLOR="0;31"
[2025-07-24 16:47:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 16:47:40] HOME_URL="https://www.centos.org/"
[2025-07-24 16:47:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 16:47:40] 
[2025-07-24 16:47:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 16:47:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 16:47:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 16:47:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 16:47:40] 
[2025-07-24 16:47:40] 2025-07-24 16:47:10,695 | INFO     | ***************************************
[2025-07-24 16:47:40] 2025-07-24 16:47:11,198 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-24 16:47:40] 2025-07-24 16:47:11,207 | INFO     | sufficient remaining disk space (68434264064 B)
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | INFO     | update_server=False
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | INFO     | aborting loop
[2025-07-24 16:47:40] 2025-07-24 16:47:11,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 16:47:40] 2025-07-24 16:47:11,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 16:47:40] 2025-07-24 16:47:11,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 16:47:40] 2025-07-24 16:47:11,467 | INFO     | all data control threads have been joined
[2025-07-24 16:47:40] 2025-07-24 16:47:12,210 | INFO     | [job] retrieve thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,210 | INFO     | [job] job monitor thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,210 | INFO     | [job] queue monitor thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,250 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,274 | INFO     | [payload] failed_post thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,290 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,386 | INFO     | [data] copytool_in thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,473 | INFO     | [data] control thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,490 | INFO     | all payload control threads have been joined
[2025-07-24 16:47:40] 2025-07-24 16:47:12,498 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,662 | INFO     | [payload] validate_post thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:12,767 | INFO     | all job control threads have been joined
[2025-07-24 16:47:40] 2025-07-24 16:47:12,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:13,014 | INFO     | [job] validate thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:13,210 | INFO     | [data] copytool_out thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:13,494 | INFO     | [payload] control thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:13,770 | INFO     | [job] control thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:15,214 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 16:47:40] 2025-07-24 16:47:16,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680913045312)>', '<ExcThread(monitor, started 140680613574400)>']
[2025-07-24 16:47:40] 2025-07-24 16:47:21,918 | INFO     | all workflow threads have been joined
[2025-07-24 16:47:40] 2025-07-24 16:47:21,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 16:47:40] 2025-07-24 16:47:21,918 | INFO     | traces error code: 0
[2025-07-24 16:47:40] 2025-07-24 16:47:21,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 16:47:40] 2025-07-24 16:47:40,694 | INFO     | PID=989273 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 16:47:40] 2025-07-24 16:47:40,694 | INFO     | .. there are 2 such processes running
[2025-07-24 16:47:40] 2025-07-24 16:47:40,694 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 16:47:40] 2025-07-24 16:47:40,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 16:47:40] 2025-07-24 16:47:40,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 16:47:40] 2025-07-24 16:47:40,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 16:47:40] 2025-07-24 16:47:40,695 | INFO     | [monitor] control thread has ended
[2025-07-24 16:47:40] 2025-07-24 16:47:40,758 [wrapper] ==== pilot stdout END ====
[2025-07-24 16:47:40] 2025-07-24 16:47:40,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 16:47:40] 2025-07-24 16:47:40,761 [wrapper] pilotpid: 989273
[2025-07-24 16:47:40] 2025-07-24 16:47:40,762 [wrapper] Pilot exit status: 0
[2025-07-24 16:47:40] 2025-07-24 16:47:40,766 [wrapper] pandaids: 6741800740
[2025-07-24 16:47:40] 2025-07-24 16:47:40,776 [wrapper] cleanup supervisor_pilot 1056049 989274
[2025-07-24 16:47:40] 2025-07-24 16:47:40,778 [wrapper] Test setup, not cleaning
[2025-07-24 16:47:40] 2025-07-24 16:47:40,779 [wrapper] apfmon messages muted
[2025-07-24 16:47:40] 2025-07-24 16:47:40,780 [wrapper] ==== wrapper stdout END ====
[2025-07-24 16:47:40] 2025-07-24 16:47:40,781 [wrapper] ==== wrapper stderr END ====
[2025-07-24 16:47:40]  *** Error codes and diagnostics ***
[2025-07-24 16:47:40]     "exeErrorCode": 0,
[2025-07-24 16:47:40]     "exeErrorDiag": "",
[2025-07-24 16:47:40]     "pilotErrorCode": 0,
[2025-07-24 16:47:40]     "pilotErrorDiag": "",
[2025-07-24 16:47:40]  *** Listing of results directory ***
[2025-07-24 16:47:40] total 604784
[2025-07-24 16:47:40] -rw-r--r-- 1 boinc boinc    530466 Jul 21 23:18 pilot3.tar.gz
[2025-07-24 16:47:40] -rw-r--r-- 1 boinc boinc      5112 Jul 21 23:36 queuedata.json
[2025-07-24 16:47:40] -rwx------ 1 boinc boinc     36292 Jul 21 23:36 runpilot2-wrapper.sh
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc       100 Jul 24 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 16:47:40] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 12:36 run_atlas
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc       105 Jul 24 12:36 job.xml
[2025-07-24 16:47:40] -rw-r--r-- 2 boinc boinc     15095 Jul 24 12:36 start_atlas.sh
[2025-07-24 16:47:40] drwxrwx--x 2 boinc boinc      4096 Jul 24 12:36 shared
[2025-07-24 16:47:40] -rw-r--r-- 2 boinc boinc    542900 Jul 24 12:36 input.tar.gz
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc      9360 Jul 24 12:36 init_data.xml
[2025-07-24 16:47:40] -rw-r--r-- 2 boinc boinc 330764294 Jul 24 12:36 EVNT.45697530._000115.pool.root.1
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc         0 Jul 24 12:36 boinc_lockfile
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc      2608 Jul 24 12:36 pandaJob.out
[2025-07-24 16:47:40] -rw------- 1 boinc boinc    979599 Jul 24 12:36 agis_schedconf.cvmfs.json
[2025-07-24 16:47:40] drwx------ 4 boinc boinc      4096 Jul 24 12:36 pilot3
[2025-07-24 16:47:40] -rw------- 1 boinc boinc 280917482 Jul 24 16:45 HITS.45697532._002851.pool.root.1
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc       530 Jul 24 16:45 boinc_task_state.xml
[2025-07-24 16:47:40] -rw------- 1 boinc boinc      1020 Jul 24 16:46 memory_monitor_summary.json
[2025-07-24 16:47:40] -rw------- 1 boinc boinc   1593052 Jul 24 16:46 agis_ddmendpoints.agis.ALL.json
[2025-07-24 16:47:40] -rw------- 1 boinc boinc    444151 Jul 24 16:46 log.45697532._002851.job.log.tgz.1
[2025-07-24 16:47:40] -rw------- 1 boinc boinc      7759 Jul 24 16:47 heartbeat.json
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc      8192 Jul 24 16:47 boinc_mmap_file
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc        28 Jul 24 16:47 wrapper_checkpoint.txt
[2025-07-24 16:47:40] -rw------- 1 boinc boinc       821 Jul 24 16:47 pilotlog.txt
[2025-07-24 16:47:40] -rw------- 1 boinc boinc        95 Jul 24 16:47 pilot_heartbeat.json
[2025-07-24 16:47:40] -rw------- 1 boinc boinc   1424950 Jul 24 16:47 log.45697532._002851.job.log.1
[2025-07-24 16:47:40] -rw------- 1 boinc boinc       357 Jul 24 16:47 output.list
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc       620 Jul 24 16:47 runtime_log
[2025-07-24 16:47:40] -rw------- 1 boinc boinc   1884160 Jul 24 16:47 result.tar.gz
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc      8955 Jul 24 16:47 runtime_log.err
[2025-07-24 16:47:40] -rw------- 1 boinc boinc       654 Jul 24 16:47 EhnNDmYEFy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOptKDmU1219m.diag
[2025-07-24 16:47:40] -rw-rw-r-- 1 boinc boinc     20668 Jul 24 16:47 stderr.txt
[2025-07-24 16:47:40] HITS file was successfully produced:
[2025-07-24 16:47:40] -rw------- 1 boinc boinc 280917482 Jul 24 16:45 shared/HITS.pool.root.1
[2025-07-24 16:47:40]  *** Contents of shared directory: ***
[2025-07-24 16:47:40] total 599748
[2025-07-24 16:47:40] -rw-r--r-- 2 boinc boinc     15095 Jul 24 12:36 start_atlas.sh
[2025-07-24 16:47:40] -rw-r--r-- 2 boinc boinc    542900 Jul 24 12:36 input.tar.gz
[2025-07-24 16:47:40] -rw-r--r-- 2 boinc boinc 330764294 Jul 24 12:36 ATLAS.root_0
[2025-07-24 16:47:40] -rw------- 1 boinc boinc 280917482 Jul 24 16:45 HITS.pool.root.1
[2025-07-24 16:47:40] -rw------- 1 boinc boinc   1884160 Jul 24 16:47 result.tar.gz
16:47:41 (985639): run_atlas exited; CPU time 56230.724341
16:47:41 (985639): called boinc_finish(0)

</stderr_txt>
]]>

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