Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:08 (2751682): wrapper (7.7.26015): starting
10:07:08 (2751682): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 10:07:08] Arguments: --nthreads 12
[2025-07-22 10:07:08] Threads: 12
[2025-07-22 10:07:08] Checking for CVMFS
[2025-07-22 10:07:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 10:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 10:07:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 10:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 10:07:09] 2.11.5.0 6746 30219 210324 148627 3 706 31012098 45568001 18672 130560 0 198607333 99.679 186487093 24779 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 10:07:09] CVMFS is ok
[2025-07-22 10:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 10:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 10:07:09] Further information can be found at the LHC@home message board.
[2025-07-22 10:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 10:07:09] Checking for apptainer binary...
[2025-07-22 10:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 10:07:09] Running /usr/bin/apptainer --version
[2025-07-22 10:07:09] apptainer version 1.4.1-1.el9
[2025-07-22 10:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 10:07:10] wns0081.triumf.lcg
[2025-07-22 10:07:10] apptainer works
[2025-07-22 10:07:10] Set ATHENA_PROC_NUMBER=12
[2025-07-22 10:07:10] Set ATHENA_CORE_NUMBER=12
[2025-07-22 10:07:10] Starting ATLAS job with PandaID=6741782535
[2025-07-22 10:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 10:12:14]  *** The last 200 lines of the pilot log: ***
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | wrong length of table data, x=[1753204137.0], y=[1229.0] (must be same and length>=4)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | could have reported an average CPU frequency of 2456 MHz (4 samples)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | ..............................
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . Timing measurements:
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . get job = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . initial setup = 4 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . payload setup = 17 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . stage-in = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . payload execution = 45 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . stage-out = 1 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . log creation = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | ..............................
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741782535/pilotlog.txt
[2025-07-22 10:12:15] 2025-07-22 17:11:40,055 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 10:12:15] - Log from pilotlog.txt -
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741782535/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | extracted standard info from prmon json
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | wrong length of table data, x=[1753204137.0], y=[1229.0] (must be same and length>=4)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | could have reported an average CPU frequency of 2456 MHz (4 samples)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | ..............................
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . Timing measurements:
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . get job = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . initial setup = 4 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . payload setup = 17 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . stage-in = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . payload execution = 45 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . stage-out = 1 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . log creation = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | ..............................
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741782535/pilotlog.txt
[2025-07-22 10:12:15] 2025-07-22 17:11:40,056 | WARNING  | 
[2025-07-22 10:12:15] [begin log extracts]
[2025-07-22 10:12:15] - Log from pilotlog.txt -
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741782535/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | extracted standard info from prmon json
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 10:12:15] 2025-07-22 17:11:40,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 10:12:15] 2025-07-22 17:11:40,039 | WARNING  | wrong length of table data, x=[1753204137.0], y=[1229.0] (must be same and length>=4)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | could have reported an average CPU frequency of 2456 MHz (4 samples)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | ..............................
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . Timing measurements:
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . get job = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . initial setup = 4 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . payload setup = 17 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . stage-in = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . payload execution = 45 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . stage-out = 1 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | . log creation = 0 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | ..............................
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 10:12:15] 2025-07-22 17:11:40,040 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741782535/pilotlog.txt
[2025-07-22 10:12:15] [end log extracts]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,056 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,057 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 10:12:15] 2025-07-22 17:11:40,361 | INFO     | 
[2025-07-22 10:12:15] 2025-07-22 17:11:40,361 | INFO     | job summary report
[2025-07-22 10:12:15] 2025-07-22 17:11:40,361 | INFO     | --------------------------------------------------
[2025-07-22 10:12:15] 2025-07-22 17:11:40,361 | INFO     | PanDA job id: 6741782535
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | task id: 45697490
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 10:09:13,647 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | pilot state: failed 
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | transexitcode: 65
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | exeerrorcode: 65
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | exitcode: 65
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | nevents: 0
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | neventsw: 0
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | pid: 2761587
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | pgrp: 2761587
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | corecount: 12
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | event service: False
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | sizes: {0: 2397324, 1: 2397495, 2: 2397551, 13: 2397551, 15: 2397869, 24: 2397897, 66: 2421258, 67: 2421234, 69: 2425582, 203: 2425720}
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | --------------------------------------------------
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | 
[2025-07-22 10:12:15] 2025-07-22 17:11:40,362 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 10:12:15] 2025-07-22 17:11:40,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | job 6741782535 has completed (purged errors)
[2025-07-22 10:12:15] 2025-07-22 17:11:40,485 | INFO     | overall cleanup function is called
[2025-07-22 10:12:15] 2025-07-22 17:11:41,492 | INFO     | --- collectZombieJob: --- 10, [2761587]
[2025-07-22 10:12:15] 2025-07-22 17:11:41,492 | INFO     | zombie collector waiting for pid 2761587
[2025-07-22 10:12:15] 2025-07-22 17:11:41,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 10:12:15] 2025-07-22 17:11:41,492 | INFO     | collected zombie processes
[2025-07-22 10:12:15] 2025-07-22 17:11:41,493 | INFO     | will attempt to kill all subprocesses of pid=2761587
[2025-07-22 10:12:15] 2025-07-22 17:11:42,158 | INFO     | process IDs to be killed: [2761587] (in reverse order)
[2025-07-22 10:12:15] 2025-07-22 17:11:42,235 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 10:12:15] 2025-07-22 17:11:42,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 10:12:15] 2025-07-22 17:11:42,275 | INFO     | did not find any defunct processes belonging to 2761587
[2025-07-22 10:12:15] 2025-07-22 17:11:42,340 | INFO     | did not find any defunct processes belonging to 2761587
[2025-07-22 10:12:15] 2025-07-22 17:11:42,340 | INFO     | ready for new job
[2025-07-22 10:12:15] 2025-07-22 17:11:42,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 10:12:15] 2025-07-22 17:11:42,370 | INFO     | ***************************************
[2025-07-22 10:12:15] 2025-07-22 17:11:42,370 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 10:12:15] 2025-07-22 17:11:42,370 | INFO     | ***************************************
[2025-07-22 10:12:15] 2025-07-22 17:11:42,370 | INFO     | 
[2025-07-22 10:12:15] 2025-07-22 17:11:42,394 | INFO     | architecture information:
[2025-07-22 10:12:15] 2025-07-22 17:11:42,394 | INFO     | executing command: cat /etc/os-release
[2025-07-22 10:12:15] 2025-07-22 17:11:42,493 | INFO     | cat /etc/os-release:
[2025-07-22 10:12:15] NAME="CentOS Linux"
[2025-07-22 10:12:15] VERSION="7 (Core)"
[2025-07-22 10:12:15] ID="centos"
[2025-07-22 10:12:15] ID_LIKE="rhel fedora"
[2025-07-22 10:12:15] VERSION_ID="7"
[2025-07-22 10:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 10:12:15] ANSI_COLOR="0;31"
[2025-07-22 10:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 10:12:15] HOME_URL="https://www.centos.org/"
[2025-07-22 10:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 10:12:15] 
[2025-07-22 10:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 10:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 10:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 10:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 10:12:15] 
[2025-07-22 10:12:15] 2025-07-22 17:11:42,493 | INFO     | ***************************************
[2025-07-22 10:12:15] 2025-07-22 17:11:42,996 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 10:12:15] 2025-07-22 17:11:43,097 | INFO     | sufficient remaining disk space (1815194107904 B)
[2025-07-22 10:12:15] 2025-07-22 17:11:43,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 10:12:15] 2025-07-22 17:11:43,098 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 10:12:15] 2025-07-22 17:11:43,098 | INFO     | update_server=False
[2025-07-22 10:12:15] 2025-07-22 17:11:43,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 10:12:15] 2025-07-22 17:11:43,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 10:12:15] 2025-07-22 17:11:43,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 10:12:15] 2025-07-22 17:11:43,397 | INFO     | aborting loop
[2025-07-22 10:12:15] 2025-07-22 17:11:43,526 | INFO     | all job control threads have been joined
[2025-07-22 10:12:15] 2025-07-22 17:11:43,544 | INFO     | all data control threads have been joined
[2025-07-22 10:12:15] 2025-07-22 17:11:43,990 | INFO     | all payload control threads have been joined
[2025-07-22 10:12:15] 2025-07-22 17:11:44,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 10:12:15] 2025-07-22 17:11:44,104 | INFO     | [job] retrieve thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,409 | INFO     | [job] job monitor thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,432 | INFO     | [data] copytool_in thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,487 | INFO     | [payload] validate_post thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,532 | INFO     | [job] control thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,538 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,550 | INFO     | [data] control thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,597 | INFO     | [job] validate thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,758 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,778 | INFO     | [payload] failed_post thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:44,995 | INFO     | [payload] control thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:45,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 10:12:15] 2025-07-22 17:11:45,284 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:46,033 | INFO     | [data] copytool_out thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:46,278 | INFO     | [job] queue monitor thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:47,185 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 10:12:15] 2025-07-22 17:11:48,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647481276224)>', '<ExcThread(monitor, started 139646944134912)>']
[2025-07-22 10:12:15] 2025-07-22 17:11:53,140 | INFO     | all workflow threads have been joined
[2025-07-22 10:12:15] 2025-07-22 17:11:53,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 10:12:15] 2025-07-22 17:11:53,141 | INFO     | traces error code: 0
[2025-07-22 10:12:15] 2025-07-22 17:11:53,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 10:12:15] 2025-07-22 17:12:12,882 | INFO     | PID=2755258 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 10:12:15] 2025-07-22 17:12:12,884 | INFO     | .. there are 28 such processes running
[2025-07-22 10:12:15] 2025-07-22 17:12:12,888 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 10:12:15] 2025-07-22 17:12:12,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 10:12:15] 2025-07-22 17:12:12,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 10:12:15] 2025-07-22 17:12:12,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 10:12:15] 2025-07-22 17:12:12,889 | INFO     | [monitor] control thread has ended
[2025-07-22 10:12:15] 2025-07-22 17:12:13,749 [wrapper] ==== pilot stdout END ====
[2025-07-22 10:12:15] 2025-07-22 17:12:13,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 10:12:15] 2025-07-22 17:12:13,785 [wrapper] pilotpid: 2755258
[2025-07-22 10:12:15] 2025-07-22 17:12:13,801 [wrapper] Pilot exit status: 0
[2025-07-22 10:12:15] 2025-07-22 17:12:13,894 [wrapper] pandaids: 6741782535
[2025-07-22 10:12:15] 2025-07-22 17:12:14,142 [wrapper] cleanup supervisor_pilot 2755265 2755259
[2025-07-22 10:12:15] 2025-07-22 17:12:14,180 [wrapper] Test setup, not cleaning
[2025-07-22 10:12:15] 2025-07-22 17:12:14,321 [wrapper] apfmon messages muted
[2025-07-22 10:12:15] 2025-07-22 17:12:14,336 [wrapper] ==== wrapper stdout END ====
[2025-07-22 10:12:15] 2025-07-22 17:12:14,399 [wrapper] ==== wrapper stderr END ====
[2025-07-22 10:12:15]  *** Error codes and diagnostics ***
[2025-07-22 10:12:15]     "exeErrorCode": 65,
[2025-07-22 10:12:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 10:12:15]     "pilotErrorCode": 1305,
[2025-07-22 10:12:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 10:12:15]  *** Listing of results directory ***
[2025-07-22 10:12:15] total 342448
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc    530466 Jul 22 06:16 pilot3.tar.gz
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc      5112 Jul 22 06:41 queuedata.json
[2025-07-22 10:12:15] -rwx------. 1 boinc boinc     36292 Jul 22 06:42 runpilot2-wrapper.sh
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc       100 Jul 22 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 10:12:15] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 10:07 run_atlas
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc       105 Jul 22 10:07 job.xml
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc      6596 Jul 22 10:07 init_data.xml
[2025-07-22 10:12:15] -rw-r--r--. 2 boinc boinc 346587616 Jul 22 10:07 EVNT.45697488._000031.pool.root.1
[2025-07-22 10:12:15] -rw-r--r--. 2 boinc boinc     15095 Jul 22 10:07 start_atlas.sh
[2025-07-22 10:12:15] drwxrwx--x. 2 boinc boinc      4096 Jul 22 10:07 shared
[2025-07-22 10:12:15] -rw-r--r--. 2 boinc boinc    542897 Jul 22 10:07 input.tar.gz
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc         0 Jul 22 10:07 boinc_lockfile
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc      2587 Jul 22 10:07 pandaJob.out
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc    977696 Jul 22 10:07 agis_schedconf.cvmfs.json
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc   1593031 Jul 22 10:07 agis_ddmendpoints.agis.ALL.json
[2025-07-22 10:12:15] drwx------. 4 boinc boinc      4096 Jul 22 10:07 pilot3
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc       524 Jul 22 10:09 boinc_task_state.xml
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc       965 Jul 22 10:09 memory_monitor_summary.json
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc     21657 Jul 22 10:09 log.45697490._000638.job.log.tgz.1
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc      8382 Jul 22 10:11 heartbeat.json
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc        95 Jul 22 10:11 pilot_heartbeat.json
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc        22 Jul 22 10:12 wrapper_checkpoint.txt
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc      8192 Jul 22 10:12 boinc_mmap_file
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc       823 Jul 22 10:12 pilotlog.txt
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc     80186 Jul 22 10:12 log.45697490._000638.job.log.1
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc       188 Jul 22 10:12 output.list
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc       620 Jul 22 10:12 runtime_log
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc    122880 Jul 22 10:12 result.tar.gz
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc       644 Jul 22 10:12 tvXLDmFRSy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXTJLDmTAUCnm.diag
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc      8485 Jul 22 10:12 runtime_log.err
[2025-07-22 10:12:15] -rw-r--r--. 1 boinc boinc     21373 Jul 22 10:12 stderr.txt
[2025-07-22 10:12:15] No HITS result produced
[2025-07-22 10:12:15]  *** Contents of shared directory: ***
[2025-07-22 10:12:15] total 339140
[2025-07-22 10:12:15] -rw-r--r--. 2 boinc boinc 346587616 Jul 22 10:07 ATLAS.root_0
[2025-07-22 10:12:15] -rw-r--r--. 2 boinc boinc     15095 Jul 22 10:07 start_atlas.sh
[2025-07-22 10:12:15] -rw-r--r--. 2 boinc boinc    542897 Jul 22 10:07 input.tar.gz
[2025-07-22 10:12:15] -rw-------. 1 boinc boinc    122880 Jul 22 10:12 result.tar.gz
10:12:16 (2751682): run_atlas exited; CPU time 27.472569
10:12:16 (2751682): called boinc_finish(0)

</stderr_txt>
]]>

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