Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:59:58 (1194475): wrapper (7.7.26015): starting
23:59:58 (1194475): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 23:59:58] Arguments: --nthreads 12
[2025-07-22 23:59:58] Threads: 12
[2025-07-22 23:59:58] Checking for CVMFS
[2025-07-22 23:59:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 23:59:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 23:59:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 23:59:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 23:59:58] 2.13.1.0 8995 26237 246384 148635 3 196 36123249 46080001 7455 130560 0 240542164 99.903 62327639 23748 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-22 23:59:58] CVMFS is ok
[2025-07-22 23:59:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 23:59:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 23:59:58] Further information can be found at the LHC@home message board.
[2025-07-22 23:59:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 23:59:58] Checking for apptainer binary...
[2025-07-22 23:59:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 23:59:58] Running /usr/bin/apptainer --version
[2025-07-22 23:59:58] apptainer version 1.4.1-1.el9
[2025-07-22 23:59:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 23:59:59] mff2103.farm.particle.cz
[2025-07-22 23:59:59] apptainer works
[2025-07-22 23:59:59] Set ATHENA_PROC_NUMBER=12
[2025-07-22 23:59:59] Set ATHENA_CORE_NUMBER=12
[2025-07-22 23:59:59] Starting ATLAS job with PandaID=6742061032
[2025-07-22 23:59:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 01:21:00]  *** The last 200 lines of the pilot log: ***
[2025-07-23 01:21:00]  lfn=log.45697523._004890.job.log.tgz.1
[2025-07-23 01:21:00]  mtime=0
[2025-07-23 01:21:00]  protocol_id=None
[2025-07-23 01:21:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 01:21:00]  replicas=None
[2025-07-23 01:21:00]  scope=mc23_13p6TeV
[2025-07-23 01:21:00]  status=None
[2025-07-23 01:21:00]  status_code=0
[2025-07-23 01:21:00]  storage_token=
[2025-07-23 01:21:00]  surl=/scratch/.boinc/slots/7/PanDA_Pilot-6742061032/log.45697523._004890.job.log.tgz.1
[2025-07-23 01:21:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/dd/log.45697523._004890.job.log.tgz.1
[2025-07-23 01:21:00]  workdir=None
[2025-07-23 01:21:00] ]
[2025-07-23 01:21:00] 2025-07-22 23:20:18,587 | INFO     | transferring file log.45697523._004890.job.log.tgz.1 from /scratch/.boinc/slots/7/PanDA_Pilot-6742061032/log.45697523._004890.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 01:21:00] 2025-07-22 23:20:18,587 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/7/PanDA_Pilot-6742061032/log.45697523._004890.job.log.tgz.1 /scratch/.boinc/slots/7/log.45697523._004890.j
[2025-07-23 01:21:00] 2025-07-22 23:20:18,617 | INFO     | adding to output.list: log.45697523._004890.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/dd/log.45697523._004890.job.log.tg
[2025-07-23 01:21:00] 2025-07-22 23:20:18,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 01:21:00] 2025-07-22 23:20:18,618 | INFO     | summary of transferred files:
[2025-07-23 01:21:00] 2025-07-22 23:20:18,618 | INFO     |  -- lfn=log.45697523._004890.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 01:21:00] 2025-07-22 23:20:18,618 | INFO     | stage-out finished correctly
[2025-07-23 01:21:00] 2025-07-22 23:20:20,461 | INFO     | monitor loop #341: job 0:6742061032 is in state 'finished'
[2025-07-23 01:21:00] 2025-07-22 23:20:20,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 01:21:00] 2025-07-22 23:20:20,720 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 01:21:00] 2025-07-22 23:20:22,155 | INFO     | job 6742061032 has state=finished
[2025-07-23 01:21:00] 2025-07-22 23:20:22,155 | INFO     | preparing for final server update for job 6742061032 in state='finished'
[2025-07-23 01:21:00] 2025-07-22 23:20:22,156 | INFO     | this job has now completed (state=finished)
[2025-07-23 01:21:00] 2025-07-22 23:20:22,156 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 01:21:00] 2025-07-22 23:20:22,156 | INFO     | log transfer has been attempted: DONE
[2025-07-23 01:21:00] 2025-07-22 23:20:22,156 | INFO     | job 6742061032 has finished - writing final server update
[2025-07-23 01:21:00] 2025-07-22 23:20:22,156 | INFO     | total number of processed events: 400 (read)
[2025-07-23 01:21:00] 2025-07-22 23:20:22,157 | INFO     | executing command: lscpu
[2025-07-23 01:21:00] 2025-07-22 23:20:22,238 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 01:21:00] 2025-07-22 23:20:22,965 | INFO     | monitor loop #342: job 0:6742061032 is in state 'finished'
[2025-07-23 01:21:00] 2025-07-22 23:20:22,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 01:21:00] 2025-07-22 23:20:25,468 | INFO     | monitor loop #343: job 0:6742061032 is in state 'finished'
[2025-07-23 01:21:00] 2025-07-22 23:20:25,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,109 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 01:21:00] 2025-07-22 23:20:27,125 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2768.51803125
[2025-07-23 01:21:00] 2025-07-22 23:20:27,143 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6742061032/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,143 | INFO     | extracted standard info from prmon json
[2025-07-23 01:21:00] 2025-07-22 23:20:27,143 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 01:21:00] 2025-07-22 23:20:27,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 01:21:00] 2025-07-22 23:20:27,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 01:21:00] 2025-07-22 23:20:27,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 01:21:00] 2025-07-22 23:20:27,146 | INFO     | fitting pss+swap vs Time
[2025-07-23 01:21:00] 2025-07-22 23:20:27,146 | INFO     | sum of square deviations: 115715658.0
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | sum of deviations: 1631237660.9999998
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | mean x: 1753224110.5
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | mean y: 2745037.0555555555
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | -- intersect: -24712364798.99468
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | intersect: -24712364798.99468
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | chi2: 0.000863955725264264
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | -- intersect: -24712364798.99468
[2025-07-23 01:21:00] 2025-07-22 23:20:27,147 | INFO     | current memory leak: 14.10 B/s (using 72 data points, chi2=0.00)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | could have reported an average CPU frequency of 2758 MHz (6 samples)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | ..............................
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | . Timing measurements:
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | . get job = 0 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | . initial setup = 1 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | . payload setup = 7 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | . stage-in = 0 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,148 | INFO     | . payload execution = 4778 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,149 | INFO     | . stage-out = 0 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,149 | INFO     | . log creation = 0 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,149 | INFO     | ..............................
[2025-07-23 01:21:00] 2025-07-22 23:20:27,246 | INFO     | 
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | job summary report
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | --------------------------------------------------
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | PanDA job id: 6742061032
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | task id: 45697523
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | errors: (none)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | pilot state: finished 
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | transexitcode: 0
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | exeerrorcode: 0
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | exeerrordiag: 
[2025-07-23 01:21:00] 2025-07-22 23:20:27,247 | INFO     | exitcode: 0
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | exitmsg: OK
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | cpuconsumptiontime: 51803 s
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | nevents: 400
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | neventsw: 0
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | pid: 1205850
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | pgrp: 1205850
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | corecount: 12
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | event service: False
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | sizes: {0: 2397382, 1: 2397581, 6: 2397843, 11: 2397871, 4790: 2424077, 4791: 2424076, 4793: 2433260, 4795: 2433316, 4801: 2433510}
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | --------------------------------------------------
[2025-07-23 01:21:00] 2025-07-22 23:20:27,248 | INFO     | 
[2025-07-23 01:21:00] 2025-07-22 23:20:27,249 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-07-23 01:21:00] 2025-07-22 23:20:27,278 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | job 6742061032 has completed (purged errors)
[2025-07-23 01:21:00] 2025-07-22 23:20:27,280 | INFO     | overall cleanup function is called
[2025-07-23 01:21:00] 2025-07-22 23:20:28,290 | INFO     | --- collectZombieJob: --- 10, [1205850]
[2025-07-23 01:21:00] 2025-07-22 23:20:28,290 | INFO     | zombie collector waiting for pid 1205850
[2025-07-23 01:21:00] 2025-07-22 23:20:28,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 01:21:00] 2025-07-22 23:20:28,290 | INFO     | collected zombie processes
[2025-07-23 01:21:00] 2025-07-22 23:20:28,291 | INFO     | will attempt to kill all subprocesses of pid=1205850
[2025-07-23 01:21:00] 2025-07-22 23:20:28,651 | INFO     | process IDs to be killed: [1205850] (in reverse order)
[2025-07-23 01:21:00] 2025-07-22 23:20:28,766 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 01:21:00] 2025-07-22 23:20:28,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 01:21:00] 2025-07-22 23:20:28,778 | INFO     | did not find any defunct processes belonging to 1205850
[2025-07-23 01:21:00] 2025-07-22 23:20:28,788 | INFO     | did not find any defunct processes belonging to 1205850
[2025-07-23 01:21:00] 2025-07-22 23:20:28,788 | INFO     | ready for new job
[2025-07-23 01:21:00] 2025-07-22 23:20:28,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 01:21:00] 2025-07-22 23:20:28,790 | INFO     | ***************************************
[2025-07-23 01:21:00] 2025-07-22 23:20:28,790 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 01:21:00] 2025-07-22 23:20:28,790 | INFO     | ***************************************
[2025-07-23 01:21:00] 2025-07-22 23:20:28,790 | INFO     | 
[2025-07-23 01:21:00] 2025-07-22 23:20:28,796 | INFO     | architecture information:
[2025-07-23 01:21:00] 2025-07-22 23:20:28,797 | INFO     | executing command: cat /etc/os-release
[2025-07-23 01:21:00] 2025-07-22 23:20:28,818 | INFO     | cat /etc/os-release:
[2025-07-23 01:21:00] NAME="CentOS Linux"
[2025-07-23 01:21:00] VERSION="7 (Core)"
[2025-07-23 01:21:00] ID="centos"
[2025-07-23 01:21:00] ID_LIKE="rhel fedora"
[2025-07-23 01:21:00] VERSION_ID="7"
[2025-07-23 01:21:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 01:21:00] ANSI_COLOR="0;31"
[2025-07-23 01:21:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 01:21:00] HOME_URL="https://www.centos.org/"
[2025-07-23 01:21:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 01:21:00] 
[2025-07-23 01:21:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 01:21:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 01:21:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 01:21:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 01:21:00] 
[2025-07-23 01:21:00] 2025-07-22 23:20:28,818 | INFO     | ***************************************
[2025-07-23 01:21:00] 2025-07-22 23:20:29,321 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-07-23 01:21:00] 2025-07-22 23:20:29,344 | INFO     | sufficient remaining disk space (1675042488320 B)
[2025-07-23 01:21:00] 2025-07-22 23:20:29,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 01:21:00] 2025-07-22 23:20:29,345 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 01:21:00] 2025-07-22 23:20:29,345 | INFO     | update_server=False
[2025-07-23 01:21:00] 2025-07-22 23:20:29,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 01:21:00] 2025-07-22 23:20:29,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 01:21:00] 2025-07-22 23:20:29,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 01:21:00] 2025-07-22 23:20:29,347 | INFO     | aborting loop
[2025-07-23 01:21:00] 2025-07-22 23:20:29,355 | INFO     | all job control threads have been joined
[2025-07-23 01:21:00] 2025-07-22 23:20:29,566 | INFO     | all payload control threads have been joined
[2025-07-23 01:21:00] 2025-07-22 23:20:30,062 | INFO     | all data control threads have been joined
[2025-07-23 01:21:00] 2025-07-22 23:20:30,351 | INFO     | [job] retrieve thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:30,352 | INFO     | [job] job monitor thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:30,360 | INFO     | [job] control thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:30,572 | INFO     | [payload] control thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:30,617 | INFO     | [payload] validate_post thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:30,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:30,844 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,031 | INFO     | [job] validate thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,044 | INFO     | [data] copytool_in thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,067 | INFO     | [data] control thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 01:21:00] 2025-07-22 23:20:31,352 | INFO     | [data] copytool_out thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,436 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,604 | INFO     | [payload] failed_post thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:31,743 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:32,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 01:21:00] 2025-07-22 23:20:33,258 | INFO     | [job] queue monitor thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:35,329 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 01:21:00] 2025-07-22 23:20:37,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139856170579776)>', '<ExcThread(monitor, started 139855510091520)>']
[2025-07-23 01:21:00] 2025-07-22 23:20:42,119 | INFO     | all workflow threads have been joined
[2025-07-23 01:21:00] 2025-07-22 23:20:42,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 01:21:00] 2025-07-22 23:20:42,119 | INFO     | traces error code: 0
[2025-07-23 01:21:00] 2025-07-22 23:20:42,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 01:21:00] 2025-07-22 23:20:59,831 | INFO     | PID=1198736 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 01:21:00] 2025-07-22 23:20:59,831 | INFO     | .. there are 10 such processes running
[2025-07-23 01:21:00] 2025-07-22 23:20:59,832 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 01:21:00] 2025-07-22 23:20:59,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 01:21:00] 2025-07-22 23:20:59,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 01:21:00] 2025-07-22 23:20:59,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 01:21:00] 2025-07-22 23:20:59,833 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 01:21:00] 2025-07-22 23:20:59,833 | INFO     | [monitor] control thread has ended
[2025-07-23 01:21:00] 2025-07-22 23:21:00,023 [wrapper] ==== pilot stdout END ====
[2025-07-23 01:21:00] 2025-07-22 23:21:00,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 01:21:00] 2025-07-22 23:21:00,029 [wrapper] pilotpid: 1198736
[2025-07-23 01:21:00] 2025-07-22 23:21:00,032 [wrapper] Pilot exit status: 0
[2025-07-23 01:21:00] 2025-07-22 23:21:00,046 [wrapper] pandaids: 6742061032
[2025-07-23 01:21:00] 2025-07-22 23:21:00,128 [wrapper] cleanup supervisor_pilot 1389789 1198737
[2025-07-23 01:21:00] 2025-07-22 23:21:00,133 [wrapper] Test setup, not cleaning
[2025-07-23 01:21:00] 2025-07-22 23:21:00,137 [wrapper] apfmon messages muted
[2025-07-23 01:21:00] 2025-07-22 23:21:00,141 [wrapper] ==== wrapper stdout END ====
[2025-07-23 01:21:00] 2025-07-22 23:21:00,144 [wrapper] ==== wrapper stderr END ====
[2025-07-23 01:21:00]  *** Error codes and diagnostics ***
[2025-07-23 01:21:00]     "exeErrorCode": 0,
[2025-07-23 01:21:00]     "exeErrorDiag": "",
[2025-07-23 01:21:00]     "pilotErrorCode": 0,
[2025-07-23 01:21:00]     "pilotErrorDiag": "",
[2025-07-23 01:21:00]  *** Listing of results directory ***
[2025-07-23 01:21:00] total 576292
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc      5112 Jul 22 09:08 queuedata.json
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc    530466 Jul 22 09:08 pilot3.tar.gz
[2025-07-23 01:21:00] -rwx------ 1 boinc boinc     36292 Jul 22 09:10 runpilot2-wrapper.sh
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc       100 Jul 22 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 01:21:00] -rwxr-xr-x 1 boinc boinc      7986 Jul 22 23:59 run_atlas
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc       105 Jul 22 23:59 job.xml
[2025-07-23 01:21:00] -rw-r--r-- 2 boinc boinc 317045360 Jul 22 23:59 EVNT.45697521._000195.pool.root.1
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc      6664 Jul 22 23:59 init_data.xml
[2025-07-23 01:21:00] -rw-r--r-- 2 boinc boinc     15095 Jul 22 23:59 start_atlas.sh
[2025-07-23 01:21:00] drwxrwx--x 2 boinc boinc      4096 Jul 22 23:59 shared
[2025-07-23 01:21:00] -rw-r--r-- 2 boinc boinc    542914 Jul 22 23:59 input.tar.gz
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc         0 Jul 22 23:59 boinc_lockfile
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc      2634 Jul 22 23:59 pandaJob.out
[2025-07-23 01:21:00] -rw------- 1 boinc boinc    977736 Jul 23 00:00 agis_schedconf.cvmfs.json
[2025-07-23 01:21:00] -rw------- 1 boinc boinc   1593031 Jul 23 00:00 agis_ddmendpoints.agis.ALL.json
[2025-07-23 01:21:00] drwx------ 4 boinc boinc      4096 Jul 23 00:00 pilot3
[2025-07-23 01:21:00] -rw------- 1 boinc boinc 267559518 Jul 23 01:19 HITS.45697523._004890.pool.root.1
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc       530 Jul 23 01:19 boinc_task_state.xml
[2025-07-23 01:21:00] -rw------- 1 boinc boinc      1023 Jul 23 01:20 memory_monitor_summary.json
[2025-07-23 01:21:00] -rw------- 1 boinc boinc    356682 Jul 23 01:20 log.45697523._004890.job.log.tgz.1
[2025-07-23 01:21:00] -rw------- 1 boinc boinc      7768 Jul 23 01:20 heartbeat.json
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc        27 Jul 23 01:20 wrapper_checkpoint.txt
[2025-07-23 01:21:00] -rw------- 1 boinc boinc       893 Jul 23 01:20 pilotlog.txt
[2025-07-23 01:21:00] -rw------- 1 boinc boinc        95 Jul 23 01:20 pilot_heartbeat.json
[2025-07-23 01:21:00] -rw------- 1 boinc boinc    465162 Jul 23 01:21 log.45697523._004890.job.log.1
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc      8192 Jul 23 01:21 boinc_mmap_file
[2025-07-23 01:21:00] -rw------- 1 boinc boinc       357 Jul 23 01:21 output.list
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc       620 Jul 23 01:21 runtime_log
[2025-07-23 01:21:00] -rw------- 1 boinc boinc    839680 Jul 23 01:21 result.tar.gz
[2025-07-23 01:21:00] -rw------- 1 boinc boinc       664 Jul 23 01:21 sQpNDmhJMy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0buKDmeJ7eHn.diag
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc      8721 Jul 23 01:21 runtime_log.err
[2025-07-23 01:21:00] -rw-r--r-- 1 boinc boinc     21703 Jul 23 01:21 stderr.txt
[2025-07-23 01:21:00] HITS file was successfully produced:
[2025-07-23 01:21:00] -rw------- 1 boinc boinc 267559518 Jul 23 01:19 shared/HITS.pool.root.1
[2025-07-23 01:21:00]  *** Contents of shared directory: ***
[2025-07-23 01:21:00] total 572284
[2025-07-23 01:21:00] -rw-r--r-- 2 boinc boinc 317045360 Jul 22 23:59 ATLAS.root_0
[2025-07-23 01:21:00] -rw-r--r-- 2 boinc boinc     15095 Jul 22 23:59 start_atlas.sh
[2025-07-23 01:21:00] -rw-r--r-- 2 boinc boinc    542914 Jul 22 23:59 input.tar.gz
[2025-07-23 01:21:00] -rw------- 1 boinc boinc 267559518 Jul 23 01:19 HITS.pool.root.1
[2025-07-23 01:21:00] -rw------- 1 boinc boinc    839680 Jul 23 01:21 result.tar.gz
01:21:01 (1194475): run_atlas exited; CPU time 51900.311890
01:21:01 (1194475): called boinc_finish(0)

</stderr_txt>
]]>

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