Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-23 04:21:15 (41668): Detected: vboxwrapper 26206
2025-07-23 04:21:15 (41668): Detected: BOINC client v8.0.2
2025-07-23 04:21:16 (41668): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-07-23 04:21:16 (41668): Successfully copied 'init_data.xml' to the shared directory.
2025-07-23 04:21:17 (41668): Create VM. (boinc_ee5a273d731eac02, slot#1)
2025-07-23 04:21:17 (41668): Setting Memory Size for VM. (4800MB)
2025-07-23 04:21:18 (41668): Setting CPU Count for VM. (8)
2025-07-23 04:21:18 (41668): Setting Chipset Options for VM.
2025-07-23 04:21:18 (41668): Setting Graphics Controller Options for VM.
2025-07-23 04:21:18 (41668): Setting Boot Options for VM.
2025-07-23 04:21:19 (41668): Setting Network Configuration for NAT.
2025-07-23 04:21:19 (41668): Enabling VM Network Access.
2025-07-23 04:21:19 (41668): Disabling USB Support for VM.
2025-07-23 04:21:19 (41668): Disabling COM Port Support for VM.
2025-07-23 04:21:20 (41668): Disabling LPT Port Support for VM.
2025-07-23 04:21:20 (41668): Disabling Audio Support for VM.
2025-07-23 04:21:20 (41668): Disabling Clipboard Support for VM.
2025-07-23 04:21:21 (41668): Disabling Drag and Drop Support for VM.
2025-07-23 04:21:21 (41668): Adding storage controller(s) to VM.
2025-07-23 04:21:21 (41668): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-23 04:21:22 (41668): Adding VirtualBox Guest Additions to VM.
2025-07-23 04:21:22 (41668): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-23 04:21:22 (41668): forwarding host port 58475 to guest port 80
2025-07-23 04:21:22 (41668): Enabling remote desktop for VM.
2025-07-23 04:21:23 (41668): Enabling shared directory for VM.
2025-07-23 04:21:23 (41668): Starting VM using VBoxManage interface. (boinc_ee5a273d731eac02, slot#1)
2025-07-23 04:21:28 (41668): Successfully started VM. (PID = '50656')
2025-07-23 04:21:28 (41668): Reporting VM Process ID to BOINC.
2025-07-23 04:21:28 (41668): Guest Log: BIOS: VirtualBox 5.2.44
2025-07-23 04:21:28 (41668): Guest Log: CPUID EDX: 0x178bfbff
2025-07-23 04:21:28 (41668): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-23 04:21:28 (41668): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-23 04:21:28 (41668): Detected: Web Application Enabled (http://localhost:58475)
2025-07-23 04:21:28 (41668): Detected: Remote Desktop Enabled (localhost:58476)
2025-07-23 04:21:28 (41668): Preference change detected
2025-07-23 04:21:28 (41668): Setting CPU throttle for VM. (100%)
2025-07-23 04:21:28 (41668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-23 04:21:30 (41668): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-23 04:21:30 (41668): Guest Log: BIOS: Booting from Hard Disk...
2025-07-23 04:21:33 (41668): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-23 04:21:33 (41668): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-23 04:21:33 (41668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-23 04:21:39 (41668): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-23 04:21:39 (41668): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-23 04:21:46 (41668): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000126 main     Log opened 2025-07-23T04:21:44.282011000Z
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000213 main     OS Product: Linux
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000263 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000330 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000406 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000407 main     Process ID: 1366
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.000408 main     Package type: LINUX_64BITS_GENERIC
2025-07-23 04:21:46 (41668): Guest Log: 00:00:00.001420 main     5.2.32 r132073 started. Verbose level = 0
2025-07-23 04:21:46 (41668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-23 04:21:46 (41668): Guest Log: [INFO] Mounting shared directory
2025-07-23 04:21:46 (41668): Guest Log: [INFO] Checking for init_data.xml
2025-07-23 04:21:56 (41668): Guest Log: 00:00:10.011404 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 774 377 000ns (GuestNow=1 753 233 715 510 434 000 ns GuestLast=1 753 244 504 284 811 000 ns fSetTimeLastLoop=true )
2025-07-23 04:23:49 (41668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-23 04:23:49 (41668): Guest Log: [INFO] Detected branch: prod
2025-07-23 04:24:36 (41668): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-23 04:24:36 (41668): Guest Log: Copying input files
2025-07-23 04:24:40 (41668): Guest Log: Copied input files into RunAtlas.
2025-07-23 04:24:40 (41668): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-23 04:24:40 (41668): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-23 04:24:40 (41668): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-23 04:24:40 (41668): Guest Log: Further information can be found at the LHC@home message board.
2025-07-23 04:25:42 (41668): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-23 04:25:42 (41668): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-23 04:25:42 (41668): Guest Log: 2.6.3.0 1682 1 32216 148640 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-23 04:25:43 (41668): Guest Log: copied the webapp to /var/www
2025-07-23 04:25:43 (41668): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-23 04:25:43 (41668): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-23 04:26:43 (41668): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-23 04:26:43 (41668): Guest Log:  *** Starting ATLAS job. (PandaID=6741759409 taskID=45697472) ***
2025-07-23 06:01:34 (41668): Status Report: Elapsed Time: '6000.000000'
2025-07-23 06:01:34 (41668): Status Report: CPU Time: '38444.750000'
2025-07-23 06:37:56 (41668): Guest Log:  *** Job finished ***
2025-07-23 06:37:56 (41668): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:41,342 | INFO     | [data] queue_monitor thread has finished
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:48,005 | INFO     | job.realtimelogging is not enabled
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:49,006 | INFO     | [payload] run_realtimelog thread has finished
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:50,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278228281152)>', '<ExcThread(monitor, started 140276970542848)>']
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:50,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:50,399 | INFO     | [monitor] control thread has ended
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,276 | INFO     | all workflow threads have been joined
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,276 | INFO     | end of generic workflow (traces error code: 0)
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,276 | INFO     | traces error code: 0
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,350 [wrapper] ==== pilot stdout END ====
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,357 [wrapper] ==== wrapper stdout RESUME ====
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,363 [wrapper] pilotpid: 6188
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,369 [wrapper] Pilot exit status: 0
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,446 [wrapper] pandaids: 6741759409
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,488 [wrapper] cleanup supervisor_pilot  4010 6189
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,494 [wrapper] Test setup, not cleaning
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,504 [wrapper] apfmon messages muted
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,510 [wrapper] ==== wrapper stdout END ====
2025-07-23 06:37:56 (41668): Guest Log: 2025-07-23 03:37:55,517 [wrapper] ==== wrapper stderr END ====
2025-07-23 06:37:56 (41668): Guest Log:  *** Error codes and diagnostics ***
2025-07-23 06:37:56 (41668): Guest Log:     "exeErrorCode": 0,
2025-07-23 06:37:56 (41668): Guest Log:     "exeErrorDiag": "",
2025-07-23 06:37:56 (41668): Guest Log:     "pilotErrorCode": 0,
2025-07-23 06:37:56 (41668): Guest Log:     "pilotErrorDiag": "",
2025-07-23 06:37:56 (41668): Guest Log:  *** Listing of results directory ***
2025-07-23 06:37:56 (41668): Guest Log: total 278064
2025-07-23 06:37:56 (41668): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 22 06:34 pilot3.tar.gz
2025-07-23 06:37:56 (41668): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 22 06:35 queuedata.json
2025-07-23 06:37:56 (41668): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 22 06:38 runpilot2-wrapper.sh
2025-07-23 06:37:56 (41668): Guest Log: -rwxr-xr-x. 1 atlas atlas      6195 Jul 23 01:24 init_data.xml
2025-07-23 06:37:56 (41668): Guest Log: -rwxr-xr-x. 1 atlas atlas    542894 Jul 23 01:24 input.tar.gz
2025-07-23 06:37:56 (41668): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 23 01:24 start_atlas.sh
2025-07-23 06:37:56 (41668): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 23 01:24 EVNT.45697470._000033.pool.root.1 -> /data/./ATLAS.root_0
2025-07-23 06:37:56 (41668): Guest Log: -rw-r--r--. 1 atlas atlas      2608 Jul 23 01:26 pandaJob.out
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas    977736 Jul 23 01:35 agis_schedconf.cvmfs.json
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas   1593031 Jul 23 01:35 agis_ddmendpoints.agis.ALL.json
2025-07-23 06:37:56 (41668): Guest Log: drwx------. 4 atlas atlas      4096 Jul 23 01:35 pilot3
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas 279028025 Jul 23 03:36 HITS.45697472._000823.pool.root.1
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas        95 Jul 23 03:36 pilot_heartbeat.json
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas      1032 Jul 23 03:37 memory_monitor_summary.json
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas    335040 Jul 23 03:37 log.45697472._000823.job.log.tgz.1
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas      7821 Jul 23 03:37 heartbeat.json
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 23 03:37 pilotlog.txt
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas    616322 Jul 23 03:37 log.45697472._000823.job.log.1
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas       357 Jul 23 03:37 output.list
2025-07-23 06:37:56 (41668): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 23 03:37 runtime_log
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas    972800 Jul 23 03:37 result.tar.gz
2025-07-23 06:37:56 (41668): Guest Log: -rw-r--r--. 1 atlas atlas      8578 Jul 23 03:37 runtime_log.err
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas       648 Jul 23 03:37 Pe4LDmeoLy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWiILDmQ3GGwn.diag
2025-07-23 06:37:56 (41668): Guest Log: Looking for outputfile HITS.45697472._000823.pool.root.1
2025-07-23 06:37:56 (41668): Guest Log: HITS file was successfully produced
2025-07-23 06:37:56 (41668): Guest Log: -rw-------. 1 atlas atlas 279028025 Jul 23 03:36 /home/atlas/RunAtlas/HITS.45697472._000823.pool.root.1
2025-07-23 06:37:58 (41668): Guest Log: Successfully finished the ATLAS job!
2025-07-23 06:37:58 (41668): Guest Log: Copying the results back to the shared directory!
2025-07-23 06:37:58 (41668): Guest Log:  *** Contents of shared directory: ***
2025-07-23 06:37:58 (41668): Guest Log: total 601356
2025-07-23 06:37:58 (41668): Guest Log: -rwxrwxrwx. 1 root root 335211714 Jul 23 01:21 ATLAS.root_0
2025-07-23 06:37:58 (41668): Guest Log: -rwxrwxrwx. 1 root root 279028025 Jul 23 03:37 HITS.pool.root.1
2025-07-23 06:37:58 (41668): Guest Log: -rwxrwxrwx. 1 root root      6195 Jul 23 01:21 init_data.xml
2025-07-23 06:37:58 (41668): Guest Log: -rwxrwxrwx. 1 root root    542894 Jul 22 16:40 input.tar.gz
2025-07-23 06:37:58 (41668): Guest Log: -rwxrwxrwx. 1 root root    972800 Jul 23 03:37 result.tar.gz
2025-07-23 06:37:58 (41668): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 22 16:40 start_atlas.sh
2025-07-23 06:37:58 (41668): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-23 06:37:58 (41668): VM Completion File Detected.
2025-07-23 06:37:58 (41668): Powering off VM.
2025-07-23 06:37:59 (41668): Successfully stopped VM.
2025-07-23 06:37:59 (41668): Deregistering VM. (boinc_ee5a273d731eac02, slot#1)
2025-07-23 06:37:59 (41668): Removing network bandwidth throttle group from VM.
2025-07-23 06:37:59 (41668): Removing VM from VirtualBox.
06:38:04 (41668): called boinc_finish(0)

</stderr_txt>
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