Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:26:11 (2158498): wrapper (7.7.26015): starting
09:26:11 (2158498): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 09:26:11] Arguments: --nthreads 12
[2025-07-22 09:26:11] Threads: 12
[2025-07-22 09:26:11] Checking for CVMFS
[2025-07-22 09:26:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 09:26:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 09:26:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 09:26:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 09:26:11] 2.11.5.0 6825 30185 193316 148627 2 205 33293833 45568000 9174 130560 0 204778308 99.730 155580758 22051 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 09:26:11] CVMFS is ok
[2025-07-22 09:26:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 09:26:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 09:26:11] Further information can be found at the LHC@home message board.
[2025-07-22 09:26:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 09:26:11] Checking for apptainer binary...
[2025-07-22 09:26:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 09:26:11] Running /usr/bin/apptainer --version
[2025-07-22 09:26:11] apptainer version 1.4.1-1.el9
[2025-07-22 09:26:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 09:26:11] wns0025.triumf.lcg
[2025-07-22 09:26:11] apptainer works
[2025-07-22 09:26:11] Set ATHENA_PROC_NUMBER=12
[2025-07-22 09:26:11] Set ATHENA_CORE_NUMBER=12
[2025-07-22 09:26:11] Starting ATLAS job with PandaID=6742320099
[2025-07-22 09:26:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 09:29:16]  *** The last 200 lines of the pilot log: ***
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | found no stored workdir sizes
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | wrong length of table data, x=[1753201606.0], y=[1197.0] (must be same and length>=4)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | INFO     | could have reported an average CPU frequency of 2989 MHz (4 samples)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | ..............................
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . Timing measurements:
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . get job = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . initial setup = 8 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . payload setup = 3 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . stage-in = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . payload execution = 13 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . stage-out = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . log creation = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | ..............................
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742320099/pilotlog.txt
[2025-07-22 09:29:16] 2025-07-22 16:29:02,106 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 09:29:16] - Log from pilotlog.txt -
[2025-07-22 09:29:16] 2025-07-22 16:29:02,095 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 09:29:16] 2025-07-22 16:29:02,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 09:29:16] 2025-07-22 16:29:02,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | found no stored workdir sizes
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | wrong length of table data, x=[1753201606.0], y=[1197.0] (must be same and length>=4)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | INFO     | could have reported an average CPU frequency of 2989 MHz (4 samples)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | ..............................
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . Timing measurements:
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . get job = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . initial setup = 8 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . payload setup = 3 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . stage-in = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . payload execution = 13 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . stage-out = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . log creation = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | ..............................
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742320099/pilotlog.txt
[2025-07-22 09:29:16] 2025-07-22 16:29:02,107 | WARNING  | 
[2025-07-22 09:29:16] [begin log extracts]
[2025-07-22 09:29:16] - Log from pilotlog.txt -
[2025-07-22 09:29:16] 2025-07-22 16:29:02,095 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 09:29:16] 2025-07-22 16:29:02,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 09:29:16] 2025-07-22 16:29:02,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | found no stored workdir sizes
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | WARNING  | wrong length of table data, x=[1753201606.0], y=[1197.0] (must be same and length>=4)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,096 | INFO     | could have reported an average CPU frequency of 2989 MHz (4 samples)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | ..............................
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . Timing measurements:
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . get job = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . initial setup = 8 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . payload setup = 3 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . stage-in = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . payload execution = 13 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . stage-out = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | . log creation = 0 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | ..............................
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 09:29:16] 2025-07-22 16:29:02,097 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742320099/pilotlog.txt
[2025-07-22 09:29:16] [end log extracts]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,107 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,108 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | 
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | job summary report
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | --------------------------------------------------
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | PanDA job id: 6742320099
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | task id: 45697523
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 09:26:52,269 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 09:29:16] 2025-07-22 16:29:02,167 | INFO     | pilot state: failed 
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | transexitcode: 65
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | exeerrorcode: 65
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | exitcode: 65
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | cpuconsumptiontime: 15 s
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | nevents: 0
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | neventsw: 0
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | pid: 2168499
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | pgrp: 2168499
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | corecount: 12
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | event service: False
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | sizes: {0: 2397559, 3: 2397821, 11: 2397849, 21: 2421087, 22: 2425379, 24: 2425407, 143: 2425701}
[2025-07-22 09:29:16] 2025-07-22 16:29:02,168 | INFO     | --------------------------------------------------
[2025-07-22 09:29:16] 2025-07-22 16:29:02,169 | INFO     | 
[2025-07-22 09:29:16] 2025-07-22 16:29:02,169 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | job 6742320099 has completed (purged errors)
[2025-07-22 09:29:16] 2025-07-22 16:29:02,183 | INFO     | overall cleanup function is called
[2025-07-22 09:29:16] 2025-07-22 16:29:03,189 | INFO     | --- collectZombieJob: --- 10, [2168499]
[2025-07-22 09:29:16] 2025-07-22 16:29:03,189 | INFO     | zombie collector waiting for pid 2168499
[2025-07-22 09:29:16] 2025-07-22 16:29:03,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 09:29:16] 2025-07-22 16:29:03,189 | INFO     | collected zombie processes
[2025-07-22 09:29:16] 2025-07-22 16:29:03,190 | INFO     | will attempt to kill all subprocesses of pid=2168499
[2025-07-22 09:29:16] 2025-07-22 16:29:03,317 | INFO     | process IDs to be killed: [2168499] (in reverse order)
[2025-07-22 09:29:16] 2025-07-22 16:29:03,366 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 09:29:16] 2025-07-22 16:29:03,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 09:29:16] 2025-07-22 16:29:03,372 | INFO     | did not find any defunct processes belonging to 2168499
[2025-07-22 09:29:16] 2025-07-22 16:29:03,376 | INFO     | did not find any defunct processes belonging to 2168499
[2025-07-22 09:29:16] 2025-07-22 16:29:03,377 | INFO     | ready for new job
[2025-07-22 09:29:16] 2025-07-22 16:29:03,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 09:29:16] 2025-07-22 16:29:03,378 | INFO     | ***************************************
[2025-07-22 09:29:16] 2025-07-22 16:29:03,379 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 09:29:16] 2025-07-22 16:29:03,379 | INFO     | ***************************************
[2025-07-22 09:29:16] 2025-07-22 16:29:03,379 | INFO     | 
[2025-07-22 09:29:16] 2025-07-22 16:29:03,380 | INFO     | architecture information:
[2025-07-22 09:29:16] 2025-07-22 16:29:03,381 | INFO     | executing command: cat /etc/os-release
[2025-07-22 09:29:16] 2025-07-22 16:29:03,390 | INFO     | cat /etc/os-release:
[2025-07-22 09:29:16] NAME="CentOS Linux"
[2025-07-22 09:29:16] VERSION="7 (Core)"
[2025-07-22 09:29:16] ID="centos"
[2025-07-22 09:29:16] ID_LIKE="rhel fedora"
[2025-07-22 09:29:16] VERSION_ID="7"
[2025-07-22 09:29:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 09:29:16] ANSI_COLOR="0;31"
[2025-07-22 09:29:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 09:29:16] HOME_URL="https://www.centos.org/"
[2025-07-22 09:29:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 09:29:16] 
[2025-07-22 09:29:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 09:29:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 09:29:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 09:29:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 09:29:16] 
[2025-07-22 09:29:16] 2025-07-22 16:29:03,390 | INFO     | ***************************************
[2025-07-22 09:29:16] 2025-07-22 16:29:03,893 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 09:29:16] 2025-07-22 16:29:03,903 | INFO     | sufficient remaining disk space (1985786937344 B)
[2025-07-22 09:29:16] 2025-07-22 16:29:03,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 09:29:16] 2025-07-22 16:29:03,904 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 09:29:16] 2025-07-22 16:29:03,904 | INFO     | update_server=False
[2025-07-22 09:29:16] 2025-07-22 16:29:03,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 09:29:16] 2025-07-22 16:29:03,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 09:29:16] 2025-07-22 16:29:03,904 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-22 09:29:16] 2025-07-22 16:29:03,905 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 09:29:16] 2025-07-22 16:29:03,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 09:29:16] 2025-07-22 16:29:03,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 09:29:16] 2025-07-22 16:29:04,052 | INFO     | all payload control threads have been joined
[2025-07-22 09:29:16] 2025-07-22 16:29:04,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 09:29:16] 2025-07-22 16:29:04,330 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 09:29:16] 2025-07-22 16:29:04,331 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 09:29:16] 2025-07-22 16:29:04,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 09:29:16] 2025-07-22 16:29:04,331 | INFO     | will abort loop
[2025-07-22 09:29:16] 2025-07-22 16:29:04,571 | INFO     | all data control threads have been joined
[2025-07-22 09:29:16] 2025-07-22 16:29:04,884 | INFO     | all job control threads have been joined
[2025-07-22 09:29:16] 2025-07-22 16:29:04,909 | INFO     | [job] retrieve thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:04,910 | INFO     | [job] queue monitor thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,057 | INFO     | [payload] control thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,336 | INFO     | [job] job monitor thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,372 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,392 | INFO     | [job] validate thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,512 | INFO     | [data] copytool_in thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,514 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,575 | INFO     | [data] control thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,631 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,723 | INFO     | [payload] validate_post thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:05,889 | INFO     | [job] control thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:06,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 09:29:16] 2025-07-22 16:29:06,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:06,292 | INFO     | [payload] failed_post thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:06,328 | INFO     | [data] copytool_out thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:10,081 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 09:29:16] 2025-07-22 16:29:11,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019036698432)>', '<ExcThread(monitor, started 140018148439808)>']
[2025-07-22 09:29:16] 2025-07-22 16:29:11,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 09:29:16] 2025-07-22 16:29:11,941 | INFO     | [monitor] control thread has ended
[2025-07-22 09:29:16] 2025-07-22 16:29:16,235 | INFO     | all workflow threads have been joined
[2025-07-22 09:29:16] 2025-07-22 16:29:16,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 09:29:16] 2025-07-22 16:29:16,235 | INFO     | traces error code: 0
[2025-07-22 09:29:16] 2025-07-22 16:29:16,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 09:29:16] 2025-07-22 16:29:16,335 [wrapper] ==== pilot stdout END ====
[2025-07-22 09:29:16] 2025-07-22 16:29:16,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 09:29:16] 2025-07-22 16:29:16,339 [wrapper] pilotpid: 2162125
[2025-07-22 09:29:16] 2025-07-22 16:29:16,340 [wrapper] Pilot exit status: 0
[2025-07-22 09:29:16] 2025-07-22 16:29:16,347 [wrapper] pandaids: 6742320099
[2025-07-22 09:29:16] 2025-07-22 16:29:16,379 [wrapper] cleanup supervisor_pilot 2162131 2162126
[2025-07-22 09:29:16] 2025-07-22 16:29:16,380 [wrapper] Test setup, not cleaning
[2025-07-22 09:29:16] 2025-07-22 16:29:16,382 [wrapper] apfmon messages muted
[2025-07-22 09:29:16] 2025-07-22 16:29:16,384 [wrapper] ==== wrapper stdout END ====
[2025-07-22 09:29:16] 2025-07-22 16:29:16,385 [wrapper] ==== wrapper stderr END ====
[2025-07-22 09:29:16]  *** Error codes and diagnostics ***
[2025-07-22 09:29:16]     "exeErrorCode": 65,
[2025-07-22 09:29:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 09:29:16]     "pilotErrorCode": 1305,
[2025-07-22 09:29:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 09:29:16]  *** Listing of results directory ***
[2025-07-22 09:29:16] total 314456
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc      5112 Jul 22 06:16 queuedata.json
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc    530466 Jul 22 06:16 pilot3.tar.gz
[2025-07-22 09:29:16] -rwx------. 1 boinc boinc     36292 Jul 22 06:19 runpilot2-wrapper.sh
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc       100 Jul 22 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 09:29:16] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 09:26 run_atlas
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc       105 Jul 22 09:26 job.xml
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc      6596 Jul 22 09:26 init_data.xml
[2025-07-22 09:29:16] -rw-r--r--. 2 boinc boinc 317932829 Jul 22 09:26 EVNT.45697521._000211.pool.root.1
[2025-07-22 09:29:16] -rw-r--r--. 2 boinc boinc     15095 Jul 22 09:26 start_atlas.sh
[2025-07-22 09:29:16] drwxrwx--x. 2 boinc boinc      4096 Jul 22 09:26 shared
[2025-07-22 09:29:16] -rw-r--r--. 2 boinc boinc    542903 Jul 22 09:26 input.tar.gz
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc         0 Jul 22 09:26 boinc_lockfile
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc      2644 Jul 22 09:26 pandaJob.out
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc    977696 Jul 22 09:26 agis_schedconf.cvmfs.json
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc   1593031 Jul 22 09:26 agis_ddmendpoints.agis.ALL.json
[2025-07-22 09:29:16] drwx------. 4 boinc boinc      4096 Jul 22 09:26 pilot3
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc       522 Jul 22 09:26 boinc_task_state.xml
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc       953 Jul 22 09:26 memory_monitor_summary.json
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc     20675 Jul 22 09:27 log.45697523._005345.job.log.tgz.1
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc        95 Jul 22 09:28 pilot_heartbeat.json
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc      8400 Jul 22 09:29 heartbeat.json
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc      8192 Jul 22 09:29 boinc_mmap_file
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc      4665 Jul 22 09:29 pilotlog.txt
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc        22 Jul 22 09:29 wrapper_checkpoint.txt
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc     74439 Jul 22 09:29 log.45697523._005345.job.log.1
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc       188 Jul 22 09:29 output.list
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc       620 Jul 22 09:29 runtime_log
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc    112640 Jul 22 09:29 result.tar.gz
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc      8485 Jul 22 09:29 runtime_log.err
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc       643 Jul 22 09:29 Ed4KDm94Ry7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5QJLDmthV9Fn.diag
[2025-07-22 09:29:16] -rw-r--r--. 1 boinc boinc     21593 Jul 22 09:29 stderr.txt
[2025-07-22 09:29:16] No HITS result produced
[2025-07-22 09:29:16]  *** Contents of shared directory: ***
[2025-07-22 09:29:16] total 311148
[2025-07-22 09:29:16] -rw-r--r--. 2 boinc boinc 317932829 Jul 22 09:26 ATLAS.root_0
[2025-07-22 09:29:16] -rw-r--r--. 2 boinc boinc     15095 Jul 22 09:26 start_atlas.sh
[2025-07-22 09:29:16] -rw-r--r--. 2 boinc boinc    542903 Jul 22 09:26 input.tar.gz
[2025-07-22 09:29:16] -rw-------. 1 boinc boinc    112640 Jul 22 09:29 result.tar.gz
09:29:18 (2158498): run_atlas exited; CPU time 18.053156
09:29:18 (2158498): called boinc_finish(0)

</stderr_txt>
]]>

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