Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:25 (2120670): wrapper (7.7.26015): starting
09:23:25 (2120670): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 09:23:25] Arguments: --nthreads 12
[2025-07-22 09:23:25] Threads: 12
[2025-07-22 09:23:25] Checking for CVMFS
[2025-07-22 09:23:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 09:23:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 09:23:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 09:23:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 09:23:27] 2.11.5.0 6772 30176 191376 148627 1 237 43243818 45568000 24319 130560 0 212592319 99.722 173317920 22717 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 09:23:27] CVMFS is ok
[2025-07-22 09:23:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 09:23:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 09:23:27] Further information can be found at the LHC@home message board.
[2025-07-22 09:23:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 09:23:27] Checking for apptainer binary...
[2025-07-22 09:23:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 09:23:27] Running /usr/bin/apptainer --version
[2025-07-22 09:23:27] apptainer version 1.4.1-1.el9
[2025-07-22 09:23:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 09:23:27] wns0091.triumf.lcg
[2025-07-22 09:23:27] apptainer works
[2025-07-22 09:23:27] Set ATHENA_PROC_NUMBER=12
[2025-07-22 09:23:27] Set ATHENA_CORE_NUMBER=12
[2025-07-22 09:23:27] Starting ATLAS job with PandaID=6742271976
[2025-07-22 09:23:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 09:27:48]  *** The last 200 lines of the pilot log: ***
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | wrong length of table data, x=[1753201472.0], y=[4737.0] (must be same and length>=4)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | ..............................
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . Timing measurements:
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . get job = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . initial setup = 4 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . payload setup = 10 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . stage-in = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . payload execution = 28 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . stage-out = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . log creation = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | ..............................
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742271976/pilotlog.txt
[2025-07-22 09:27:48] 2025-07-22 16:27:15,075 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 09:27:48] - Log from pilotlog.txt -
[2025-07-22 09:27:48] 2025-07-22 16:27:15,045 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742271976/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | INFO     | extracted standard info from prmon json
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | wrong length of table data, x=[1753201472.0], y=[4737.0] (must be same and length>=4)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | ..............................
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . Timing measurements:
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . get job = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . initial setup = 4 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . payload setup = 10 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . stage-in = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . payload execution = 28 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . stage-out = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . log creation = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | ..............................
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742271976/pilotlog.txt
[2025-07-22 09:27:48] 2025-07-22 16:27:15,075 | WARNING  | 
[2025-07-22 09:27:48] [begin log extracts]
[2025-07-22 09:27:48] - Log from pilotlog.txt -
[2025-07-22 09:27:48] 2025-07-22 16:27:15,045 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6742271976/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | INFO     | extracted standard info from prmon json
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:27:48] 2025-07-22 16:27:15,046 | WARNING  | wrong length of table data, x=[1753201472.0], y=[4737.0] (must be same and length>=4)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | ..............................
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . Timing measurements:
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . get job = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . initial setup = 4 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . payload setup = 10 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . stage-in = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . payload execution = 28 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . stage-out = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | . log creation = 0 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | ..............................
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 09:27:48] 2025-07-22 16:27:15,047 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742271976/pilotlog.txt
[2025-07-22 09:27:48] [end log extracts]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,075 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,076 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | 
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | job summary report
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | --------------------------------------------------
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | PanDA job id: 6742271976
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | task id: 45697532
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 09:24:48,036 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | pilot state: failed 
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | transexitcode: 65
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | exeerrorcode: 65
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | exitcode: 65
[2025-07-22 09:27:48] 2025-07-22 16:27:15,161 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | cpuconsumptiontime: 16 s
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | nevents: 0
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | neventsw: 0
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | pid: 2131706
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | pgrp: 2131706
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | corecount: 12
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | event service: False
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | sizes: {0: 2396708, 1: 2397390, 2: 2397589, 9: 2397851, 12: 2397879, 43: 2421283, 45: 2425575, 48: 2425603, 181: 2425829}
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | --------------------------------------------------
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | 
[2025-07-22 09:27:48] 2025-07-22 16:27:15,162 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | job 6742271976 has completed (purged errors)
[2025-07-22 09:27:48] 2025-07-22 16:27:15,323 | INFO     | overall cleanup function is called
[2025-07-22 09:27:48] 2025-07-22 16:27:15,352 | INFO     | PID=2124261 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 09:27:48] 2025-07-22 16:27:15,369 | INFO     | .. there are 48 such processes running
[2025-07-22 09:27:48] 2025-07-22 16:27:16,341 | INFO     | --- collectZombieJob: --- 10, [2131706]
[2025-07-22 09:27:48] 2025-07-22 16:27:16,341 | INFO     | zombie collector waiting for pid 2131706
[2025-07-22 09:27:48] 2025-07-22 16:27:16,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 09:27:48] 2025-07-22 16:27:16,341 | INFO     | collected zombie processes
[2025-07-22 09:27:48] 2025-07-22 16:27:16,341 | INFO     | will attempt to kill all subprocesses of pid=2131706
[2025-07-22 09:27:48] 2025-07-22 16:27:17,039 | INFO     | process IDs to be killed: [2131706] (in reverse order)
[2025-07-22 09:27:48] 2025-07-22 16:27:17,365 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 09:27:48] 2025-07-22 16:27:17,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 09:27:48] 2025-07-22 16:27:17,406 | INFO     | did not find any defunct processes belonging to 2131706
[2025-07-22 09:27:48] 2025-07-22 16:27:17,481 | INFO     | did not find any defunct processes belonging to 2131706
[2025-07-22 09:27:48] 2025-07-22 16:27:17,481 | INFO     | ready for new job
[2025-07-22 09:27:48] 2025-07-22 16:27:17,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 09:27:48] 2025-07-22 16:27:17,482 | INFO     | ***************************************
[2025-07-22 09:27:48] 2025-07-22 16:27:17,482 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 09:27:48] 2025-07-22 16:27:17,483 | INFO     | ***************************************
[2025-07-22 09:27:48] 2025-07-22 16:27:17,483 | INFO     | 
[2025-07-22 09:27:48] 2025-07-22 16:27:17,492 | INFO     | architecture information:
[2025-07-22 09:27:48] 2025-07-22 16:27:17,505 | INFO     | executing command: cat /etc/os-release
[2025-07-22 09:27:48] 2025-07-22 16:27:17,569 | INFO     | cat /etc/os-release:
[2025-07-22 09:27:48] NAME="CentOS Linux"
[2025-07-22 09:27:48] VERSION="7 (Core)"
[2025-07-22 09:27:48] ID="centos"
[2025-07-22 09:27:48] ID_LIKE="rhel fedora"
[2025-07-22 09:27:48] VERSION_ID="7"
[2025-07-22 09:27:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 09:27:48] ANSI_COLOR="0;31"
[2025-07-22 09:27:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 09:27:48] HOME_URL="https://www.centos.org/"
[2025-07-22 09:27:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 09:27:48] 
[2025-07-22 09:27:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 09:27:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 09:27:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 09:27:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 09:27:48] 
[2025-07-22 09:27:48] 2025-07-22 16:27:17,569 | INFO     | ***************************************
[2025-07-22 09:27:48] 2025-07-22 16:27:18,073 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 09:27:48] 2025-07-22 16:27:18,140 | INFO     | sufficient remaining disk space (1510160203776 B)
[2025-07-22 09:27:48] 2025-07-22 16:27:18,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 09:27:48] 2025-07-22 16:27:18,140 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 09:27:48] 2025-07-22 16:27:18,141 | INFO     | update_server=False
[2025-07-22 09:27:48] 2025-07-22 16:27:18,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 09:27:48] 2025-07-22 16:27:18,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 09:27:48] 2025-07-22 16:27:18,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 09:27:48] 2025-07-22 16:27:18,146 | INFO     | aborting loop
[2025-07-22 09:27:48] 2025-07-22 16:27:18,869 | INFO     | all data control threads have been joined
[2025-07-22 09:27:48] 2025-07-22 16:27:19,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 09:27:48] 2025-07-22 16:27:19,151 | INFO     | [job] retrieve thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:19,152 | INFO     | all payload control threads have been joined
[2025-07-22 09:27:48] 2025-07-22 16:27:19,156 | INFO     | [job] job monitor thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:19,274 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:19,468 | INFO     | all job control threads have been joined
[2025-07-22 09:27:48] 2025-07-22 16:27:19,734 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:19,881 | INFO     | [data] control thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:19,972 | INFO     | [data] copytool_in thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:19,990 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,027 | INFO     | [job] validate thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,032 | INFO     | [payload] failed_post thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,149 | INFO     | [data] copytool_out thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,158 | INFO     | [payload] control thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 09:27:48] 2025-07-22 16:27:20,313 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,335 | INFO     | [payload] validate_post thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:20,476 | INFO     | [job] control thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:21,196 | INFO     | [job] queue monitor thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:23,041 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 09:27:48] 2025-07-22 16:27:23,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513458067264)>', '<ExcThread(monitor, started 140512338114304)>']
[2025-07-22 09:27:48] 2025-07-22 16:27:28,460 | INFO     | all workflow threads have been joined
[2025-07-22 09:27:48] 2025-07-22 16:27:28,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 09:27:48] 2025-07-22 16:27:28,460 | INFO     | traces error code: 0
[2025-07-22 09:27:48] 2025-07-22 16:27:28,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 09:27:48] 2025-07-22 16:27:47,798 | INFO     | PID=2124261 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 09:27:48] 2025-07-22 16:27:47,798 | INFO     | .. there are 49 such processes running
[2025-07-22 09:27:48] 2025-07-22 16:27:47,798 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 09:27:48] 2025-07-22 16:27:47,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 09:27:48] 2025-07-22 16:27:47,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 09:27:48] 2025-07-22 16:27:47,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 09:27:48] 2025-07-22 16:27:47,799 | INFO     | [monitor] control thread has ended
[2025-07-22 09:27:48] 2025-07-22 16:27:47,953 [wrapper] ==== pilot stdout END ====
[2025-07-22 09:27:48] 2025-07-22 16:27:47,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 09:27:48] 2025-07-22 16:27:47,960 [wrapper] pilotpid: 2124261
[2025-07-22 09:27:48] 2025-07-22 16:27:47,962 [wrapper] Pilot exit status: 0
[2025-07-22 09:27:48] 2025-07-22 16:27:47,998 [wrapper] pandaids: 6742271976
[2025-07-22 09:27:48] 2025-07-22 16:27:48,122 [wrapper] cleanup supervisor_pilot 2124267 2124262
[2025-07-22 09:27:48] 2025-07-22 16:27:48,125 [wrapper] Test setup, not cleaning
[2025-07-22 09:27:48] 2025-07-22 16:27:48,127 [wrapper] apfmon messages muted
[2025-07-22 09:27:48] 2025-07-22 16:27:48,129 [wrapper] ==== wrapper stdout END ====
[2025-07-22 09:27:48] 2025-07-22 16:27:48,130 [wrapper] ==== wrapper stderr END ====
[2025-07-22 09:27:48]  *** Error codes and diagnostics ***
[2025-07-22 09:27:48]     "exeErrorCode": 65,
[2025-07-22 09:27:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 09:27:48]     "pilotErrorCode": 1305,
[2025-07-22 09:27:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 09:27:48]  *** Listing of results directory ***
[2025-07-22 09:27:48] total 326708
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc      5112 Jul 22 06:16 queuedata.json
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc    530466 Jul 22 06:16 pilot3.tar.gz
[2025-07-22 09:27:48] -rwx------. 1 boinc boinc     36292 Jul 22 06:18 runpilot2-wrapper.sh
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc       100 Jul 22 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 09:27:48] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 09:23 run_atlas
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc       105 Jul 22 09:23 job.xml
[2025-07-22 09:27:48] -rw-r--r--. 2 boinc boinc 330470320 Jul 22 09:23 EVNT.45697530._000221.pool.root.1
[2025-07-22 09:27:48] -rw-r--r--. 2 boinc boinc     15095 Jul 22 09:23 start_atlas.sh
[2025-07-22 09:27:48] drwxrwx--x. 2 boinc boinc      4096 Jul 22 09:23 shared
[2025-07-22 09:27:48] -rw-r--r--. 2 boinc boinc    542909 Jul 22 09:23 input.tar.gz
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc      6597 Jul 22 09:23 init_data.xml
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc         0 Jul 22 09:23 boinc_lockfile
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc      2614 Jul 22 09:23 pandaJob.out
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc    977696 Jul 22 09:23 agis_schedconf.cvmfs.json
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc   1593031 Jul 22 09:23 agis_ddmendpoints.agis.ALL.json
[2025-07-22 09:27:48] drwx------. 4 boinc boinc      4096 Jul 22 09:23 pilot3
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc       965 Jul 22 09:24 memory_monitor_summary.json
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc     21137 Jul 22 09:24 log.45697532._005578.job.log.tgz.1
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc        95 Jul 22 09:26 pilot_heartbeat.json
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc      8414 Jul 22 09:27 heartbeat.json
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc       523 Jul 22 09:27 boinc_task_state.xml
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc      8192 Jul 22 09:27 boinc_mmap_file
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc        22 Jul 22 09:27 wrapper_checkpoint.txt
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc       823 Jul 22 09:27 pilotlog.txt
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc     78798 Jul 22 09:27 log.45697532._005578.job.log.1
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc       188 Jul 22 09:27 output.list
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc       620 Jul 22 09:27 runtime_log
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc    122880 Jul 22 09:27 result.tar.gz
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc      8485 Jul 22 09:27 runtime_log.err
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc       644 Jul 22 09:27 IG4KDm53Ry7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4zuKDmSwzUnn.diag
[2025-07-22 09:27:48] -rw-r--r--. 1 boinc boinc     21929 Jul 22 09:27 stderr.txt
[2025-07-22 09:27:48] No HITS result produced
[2025-07-22 09:27:48]  *** Contents of shared directory: ***
[2025-07-22 09:27:48] total 323400
[2025-07-22 09:27:48] -rw-r--r--. 2 boinc boinc 330470320 Jul 22 09:23 ATLAS.root_0
[2025-07-22 09:27:48] -rw-r--r--. 2 boinc boinc     15095 Jul 22 09:23 start_atlas.sh
[2025-07-22 09:27:48] -rw-r--r--. 2 boinc boinc    542909 Jul 22 09:23 input.tar.gz
[2025-07-22 09:27:48] -rw-------. 1 boinc boinc    122880 Jul 22 09:27 result.tar.gz
09:27:50 (2120670): run_atlas exited; CPU time 23.623058
09:27:50 (2120670): called boinc_finish(0)

</stderr_txt>
]]>

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