Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:45:38 (3697955): wrapper (7.7.26015): starting
01:45:38 (3697955): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 01:45:38] Arguments: --nthreads 4
[2025-07-25 01:45:38] Threads: 4
[2025-07-25 01:45:38] Checking for CVMFS
[2025-07-25 01:45:38] No cvmfs_config command found, will try listing directly
[2025-07-25 01:45:38] CVMFS is ok
[2025-07-25 01:45:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 01:45:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 01:45:38] Further information can be found at the LHC@home message board.
[2025-07-25 01:45:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 01:45:38] Checking for apptainer binary...
[2025-07-25 01:45:38] which: no apptainer in ((null))
[2025-07-25 01:45:38] apptainer is not installed, using version from CVMFS
[2025-07-25 01:45:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 01:45:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-07-25 01:45:38] apptainer works
[2025-07-25 01:45:39] Set ATHENA_PROC_NUMBER=4
[2025-07-25 01:45:39] Set ATHENA_CORE_NUMBER=4
[2025-07-25 01:45:39] Starting ATLAS job with PandaID=6741743092
[2025-07-25 01:45:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:48:46 (3855764): wrapper (7.7.26015): starting
02:48:46 (3855764): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 02:48:46] Arguments: --nthreads 4
[2025-07-25 02:48:46] Threads: 4
[2025-07-25 02:48:46] This job has been restarted, cleaning up previous attempt
[2025-07-25 02:48:46] Checking for CVMFS
[2025-07-25 02:48:46] No cvmfs_config command found, will try listing directly
[2025-07-25 02:48:46] CVMFS is ok
[2025-07-25 02:48:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 02:48:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 02:48:46] Further information can be found at the LHC@home message board.
[2025-07-25 02:48:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 02:48:46] Checking for apptainer binary...
[2025-07-25 02:48:46] which: no apptainer in ((null))
[2025-07-25 02:48:46] apptainer is not installed, using version from CVMFS
[2025-07-25 02:48:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 02:48:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-07-25 02:48:46] apptainer works
[2025-07-25 02:48:46] Set ATHENA_PROC_NUMBER=4
[2025-07-25 02:48:46] Set ATHENA_CORE_NUMBER=4
[2025-07-25 02:48:46] Starting ATLAS job with PandaID=6741743092
[2025-07-25 02:48:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 06:55:27]  *** The last 200 lines of the pilot log: ***
[2025-07-25 06:55:27] 2025-07-25 04:55:10,965 | INFO     | sum of deviations: -1355160353.4999943
[2025-07-25 06:55:27] 2025-07-25 04:55:10,965 | INFO     | mean x: 1753411912.5
[2025-07-25 06:55:27] 2025-07-25 04:55:10,965 | INFO     | mean y: 2354449.3429752067
[2025-07-25 06:55:27] 2025-07-25 04:55:10,965 | INFO     | -- intersect: 543055899.2226439
[2025-07-25 06:55:27] 2025-07-25 04:55:10,965 | INFO     | intersect: 543055899.2226439
[2025-07-25 06:55:27] 2025-07-25 04:55:10,966 | INFO     | chi2: 2.2230780125153817
[2025-07-25 06:55:27] 2025-07-25 04:55:10,966 | INFO     | sum of square deviations: 4127772278.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,968 | INFO     | sum of deviations: 13971621230.999996
[2025-07-25 06:55:27] 2025-07-25 04:55:10,968 | INFO     | mean x: 1753411760.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,968 | INFO     | mean y: 2363061.4261603374
[2025-07-25 06:55:27] 2025-07-25 04:55:10,968 | INFO     | -- intersect: -5932558567.673716
[2025-07-25 06:55:27] 2025-07-25 04:55:10,968 | INFO     | intersect: -5932558567.673716
[2025-07-25 06:55:27] 2025-07-25 04:55:10,969 | INFO     | chi2: 1.4166135674918514
[2025-07-25 06:55:27] 2025-07-25 04:55:10,969 | INFO     | current chi2=1.4166135674918514 (change=36.276929576170254 %)
[2025-07-25 06:55:27] 2025-07-25 04:55:10,969 | INFO     | sum of square deviations: 3871990738.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,971 | INFO     | sum of deviations: 13532036778.5
[2025-07-25 06:55:27] 2025-07-25 04:55:10,971 | INFO     | mean x: 1753411607.5
[2025-07-25 06:55:27] 2025-07-25 04:55:10,971 | INFO     | mean y: 2362799.3060344825
[2025-07-25 06:55:27] 2025-07-25 04:55:10,971 | INFO     | -- intersect: -6125552261.977051
[2025-07-25 06:55:27] 2025-07-25 04:55:10,971 | INFO     | intersect: -6125552261.977051
[2025-07-25 06:55:27] 2025-07-25 04:55:10,972 | INFO     | chi2: 1.4170879279333242
[2025-07-25 06:55:27] 2025-07-25 04:55:10,972 | INFO     | current chi2=1.4170879279333242 (change=-0.03348552155353283 %)
[2025-07-25 06:55:27] 2025-07-25 04:55:10,972 | INFO     | right removable region: 231
[2025-07-25 06:55:27] 2025-07-25 04:55:10,972 | INFO     | sum of square deviations: 4127772278.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,974 | INFO     | sum of deviations: -32481758118.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,974 | INFO     | mean x: 1753412065.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,974 | INFO     | mean y: 2372046.5738396626
[2025-07-25 06:55:27] 2025-07-25 04:55:10,974 | INFO     | -- intersect: 13800106693.919348
[2025-07-25 06:55:27] 2025-07-25 04:55:10,974 | INFO     | intersect: 13800106693.919348
[2025-07-25 06:55:27] 2025-07-25 04:55:10,974 | INFO     | chi2: 0.9072220957001766
[2025-07-25 06:55:27] 2025-07-25 04:55:10,975 | INFO     | current chi2=0.9072220957001766 (change=59.19072157644762 %)
[2025-07-25 06:55:27] 2025-07-25 04:55:10,975 | INFO     | sum of square deviations: 3871990738.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,976 | INFO     | sum of deviations: -29167201148.499996
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | mean x: 1753412217.5
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | mean y: 2370057.5732758623
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | -- intersect: 13210595568.586863
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | intersect: 13210595568.586863
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | chi2: 0.9020421224156335
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | current chi2=0.9020421224156335 (change=0.5709708029702817 %)
[2025-07-25 06:55:27] 2025-07-25 04:55:10,977 | INFO     | left removable region: 20
[2025-07-25 06:55:27] 2025-07-25 04:55:10,978 | INFO     | sum of square deviations: 2912836010.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,979 | INFO     | sum of deviations: -3354931618.9999986
[2025-07-25 06:55:27] 2025-07-25 04:55:10,979 | INFO     | mean x: 1753412187.0
[2025-07-25 06:55:27] 2025-07-25 04:55:10,979 | INFO     | mean y: 2372187.2464454975
[2025-07-25 06:55:27] 2025-07-25 04:55:10,979 | INFO     | -- intersect: 2021908462.9279034
[2025-07-25 06:55:27] 2025-07-25 04:55:10,980 | INFO     | intersect: 2021908462.9279034
[2025-07-25 06:55:27] 2025-07-25 04:55:10,980 | INFO     | chi2: 0.042338400058196425
[2025-07-25 06:55:27] 2025-07-25 04:55:10,980 | INFO     | -- intersect: 2021908462.9279034
[2025-07-25 06:55:27] 2025-07-25 04:55:10,980 | INFO     | current memory leak: -1.15 B/s (using 211 data points, chi2=0.04)
[2025-07-25 06:55:27] 2025-07-25 04:55:10,981 | INFO     | could have reported an average CPU frequency of 2588 MHz (12 samples)
[2025-07-25 06:55:27] 2025-07-25 04:55:10,981 | INFO     | ..............................
[2025-07-25 06:55:27] 2025-07-25 04:55:10,981 | INFO     | . Timing measurements:
[2025-07-25 06:55:27] 2025-07-25 04:55:10,981 | INFO     | . get job = 0 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,981 | INFO     | . initial setup = 1 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,981 | INFO     | . payload setup = 6 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,982 | INFO     | . stage-in = 0 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,982 | INFO     | . payload execution = 14742 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,982 | INFO     | . stage-out = 1 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,982 | INFO     | . log creation = 0 s
[2025-07-25 06:55:27] 2025-07-25 04:55:10,982 | INFO     | ..............................
[2025-07-25 06:55:27] 2025-07-25 04:55:11,376 | INFO     | number of running child processes to parent process 3866460: 1
[2025-07-25 06:55:27] 2025-07-25 04:55:11,376 | INFO     | maximum number of monitored processes: 6
[2025-07-25 06:55:27] 2025-07-25 04:55:11,376 | INFO     | aborting job monitoring since job object (job id=6741743092) has expired
[2025-07-25 06:55:27] 2025-07-25 04:55:11,501 | INFO     | 
[2025-07-25 06:55:27] 2025-07-25 04:55:11,501 | INFO     | job summary report
[2025-07-25 06:55:27] 2025-07-25 04:55:11,501 | INFO     | --------------------------------------------------
[2025-07-25 06:55:27] 2025-07-25 04:55:11,501 | INFO     | PanDA job id: 6741743092
[2025-07-25 06:55:27] 2025-07-25 04:55:11,501 | INFO     | task id: 45697453
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | errors: (none)
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | pilot state: finished 
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | transexitcode: 0
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | exeerrorcode: 0
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | exeerrordiag: 
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | exitcode: 0
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | exitmsg: OK
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | cpuconsumptiontime: 57238 s
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | nevents: 400
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | neventsw: 0
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | pid: 3866460
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | pgrp: 3866460
[2025-07-25 06:55:27] 2025-07-25 04:55:11,502 | INFO     | corecount: 4
[2025-07-25 06:55:27] 2025-07-25 04:55:11,503 | INFO     | event service: False
[2025-07-25 06:55:27] 2025-07-25 04:55:11,503 | INFO     | sizes: {0: 2397574, 1: 2397574, 4: 2397864, 11: 2397892, 14752: 2428902, 14755: 2438106, 14760: 2438272}
[2025-07-25 06:55:27] 2025-07-25 04:55:11,503 | INFO     | --------------------------------------------------
[2025-07-25 06:55:27] 2025-07-25 04:55:11,503 | INFO     | 
[2025-07-25 06:55:27] 2025-07-25 04:55:11,503 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-07-25 06:55:27] 2025-07-25 04:55:11,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | job 6741743092 has completed (purged errors)
[2025-07-25 06:55:27] 2025-07-25 04:55:11,523 | INFO     | overall cleanup function is called
[2025-07-25 06:55:27] 2025-07-25 04:55:12,529 | INFO     | --- collectZombieJob: --- 10, [3866460]
[2025-07-25 06:55:27] 2025-07-25 04:55:12,529 | INFO     | zombie collector waiting for pid 3866460
[2025-07-25 06:55:27] 2025-07-25 04:55:12,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 06:55:27] 2025-07-25 04:55:12,529 | INFO     | collected zombie processes
[2025-07-25 06:55:27] 2025-07-25 04:55:12,529 | INFO     | will attempt to kill all subprocesses of pid=3866460
[2025-07-25 06:55:27] 2025-07-25 04:55:12,999 | INFO     | PID=3859465 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 06:55:27] 2025-07-25 04:55:12,999 | INFO     | .. there are 12 such processes running
[2025-07-25 06:55:27] 2025-07-25 04:55:13,121 | INFO     | process IDs to be killed: [3866460] (in reverse order)
[2025-07-25 06:55:27] 2025-07-25 04:55:13,234 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 06:55:27] 2025-07-25 04:55:13,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 06:55:27] 2025-07-25 04:55:13,244 | INFO     | did not find any defunct processes belonging to 3866460
[2025-07-25 06:55:27] 2025-07-25 04:55:13,254 | INFO     | did not find any defunct processes belonging to 3866460
[2025-07-25 06:55:27] 2025-07-25 04:55:13,254 | INFO     | ready for new job
[2025-07-25 06:55:27] 2025-07-25 04:55:13,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 06:55:27] 2025-07-25 04:55:13,257 | INFO     | ***************************************
[2025-07-25 06:55:27] 2025-07-25 04:55:13,257 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 06:55:27] 2025-07-25 04:55:13,257 | INFO     | ***************************************
[2025-07-25 06:55:27] 2025-07-25 04:55:13,257 | INFO     | 
[2025-07-25 06:55:27] 2025-07-25 04:55:13,261 | INFO     | architecture information:
[2025-07-25 06:55:27] 2025-07-25 04:55:13,261 | INFO     | executing command: cat /etc/os-release
[2025-07-25 06:55:27] 2025-07-25 04:55:13,274 | INFO     | cat /etc/os-release:
[2025-07-25 06:55:27] NAME="CentOS Linux"
[2025-07-25 06:55:27] VERSION="7 (Core)"
[2025-07-25 06:55:27] ID="centos"
[2025-07-25 06:55:27] ID_LIKE="rhel fedora"
[2025-07-25 06:55:27] VERSION_ID="7"
[2025-07-25 06:55:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 06:55:27] ANSI_COLOR="0;31"
[2025-07-25 06:55:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 06:55:27] HOME_URL="https://www.centos.org/"
[2025-07-25 06:55:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 06:55:27] 
[2025-07-25 06:55:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 06:55:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 06:55:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 06:55:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 06:55:27] 
[2025-07-25 06:55:27] 2025-07-25 04:55:13,275 | INFO     | ***************************************
[2025-07-25 06:55:27] 2025-07-25 04:55:13,777 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-07-25 06:55:27] 2025-07-25 04:55:13,790 | INFO     | sufficient remaining disk space (648866168832 B)
[2025-07-25 06:55:27] 2025-07-25 04:55:13,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 06:55:27] 2025-07-25 04:55:13,791 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 06:55:27] 2025-07-25 04:55:13,791 | INFO     | update_server=False
[2025-07-25 06:55:27] 2025-07-25 04:55:13,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 06:55:27] 2025-07-25 04:55:13,791 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 06:55:27] 2025-07-25 04:55:13,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 06:55:27] 2025-07-25 04:55:13,792 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 06:55:27] 2025-07-25 04:55:13,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 06:55:27] 2025-07-25 04:55:13,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 06:55:27] 2025-07-25 04:55:13,819 | INFO     | all job control threads have been joined
[2025-07-25 06:55:27] 2025-07-25 04:55:13,879 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 06:55:27] 2025-07-25 04:55:13,879 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 06:55:27] 2025-07-25 04:55:13,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 06:55:27] 2025-07-25 04:55:13,880 | INFO     | will abort loop
[2025-07-25 06:55:27] 2025-07-25 04:55:14,204 | INFO     | all payload control threads have been joined
[2025-07-25 06:55:27] 2025-07-25 04:55:14,796 | INFO     | [job] retrieve thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:14,814 | INFO     | all data control threads have been joined
[2025-07-25 06:55:27] 2025-07-25 04:55:14,825 | INFO     | [job] control thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:14,885 | INFO     | [job] job monitor thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,209 | INFO     | [payload] control thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,455 | INFO     | [data] copytool_in thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,544 | INFO     | [payload] validate_post thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,768 | INFO     | [job] validate thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,797 | INFO     | [data] copytool_out thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,819 | INFO     | [data] control thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:15,837 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:16,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 06:55:27] 2025-07-25 04:55:16,099 | INFO     | [payload] failed_post thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:16,277 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:16,291 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:16,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 06:55:27] 2025-07-25 04:55:17,095 | INFO     | [job] queue monitor thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:20,377 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 06:55:27] 2025-07-25 04:55:22,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23236300928832)>', '<ExcThread(monitor, started 23236066637568)>']
[2025-07-25 06:55:27] 2025-07-25 04:55:22,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 06:55:27] 2025-07-25 04:55:22,832 | INFO     | [monitor] control thread has ended
[2025-07-25 06:55:27] 2025-07-25 04:55:27,472 | INFO     | all workflow threads have been joined
[2025-07-25 06:55:27] 2025-07-25 04:55:27,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 06:55:27] 2025-07-25 04:55:27,472 | INFO     | traces error code: 0
[2025-07-25 06:55:27] 2025-07-25 04:55:27,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 06:55:27] 2025-07-25 04:55:27,601 [wrapper] ==== pilot stdout END ====
[2025-07-25 06:55:27] 2025-07-25 04:55:27,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 06:55:27] 2025-07-25 04:55:27,608 [wrapper] pilotpid: 3859465
[2025-07-25 06:55:27] 2025-07-25 04:55:27,611 [wrapper] Pilot exit status: 0
[2025-07-25 06:55:27] 2025-07-25 04:55:27,622 [wrapper] pandaids: 6741743092 6741743092
[2025-07-25 06:55:27] 2025-07-25 04:55:27,686 [wrapper] cleanup supervisor_pilot  239880 3859466
[2025-07-25 06:55:27] 2025-07-25 04:55:27,689 [wrapper] Test setup, not cleaning
[2025-07-25 06:55:27] 2025-07-25 04:55:27,692 [wrapper] apfmon messages muted
[2025-07-25 06:55:27] 2025-07-25 04:55:27,695 [wrapper] ==== wrapper stdout END ====
[2025-07-25 06:55:27] 2025-07-25 04:55:27,697 [wrapper] ==== wrapper stderr END ====
[2025-07-25 06:55:27]  *** Error codes and diagnostics ***
[2025-07-25 06:55:27]     "exeErrorCode": 0,
[2025-07-25 06:55:27]     "exeErrorDiag": "",
[2025-07-25 06:55:27]     "pilotErrorCode": 0,
[2025-07-25 06:55:27]     "pilotErrorDiag": "",
[2025-07-25 06:55:27]  *** Listing of results directory ***
[2025-07-25 06:55:27] total 878964
[2025-07-25 06:55:27] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc    530466 Jul 22 07:51 pilot3.tar.gz
[2025-07-25 06:55:27] -rwx------ 1 boinc boinc     36292 Jul 22 08:09 runpilot2-wrapper.sh
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc      5112 Jul 22 08:09 queuedata.json
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc       100 Jul 25 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 06:55:27] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 01:03 run_atlas
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc       105 Jul 25 01:03 job.xml
[2025-07-25 06:55:27] -rw-r--r-- 3 boinc boinc 316754596 Jul 25 01:45 EVNT.45697451._000242.pool.root.1
[2025-07-25 06:55:27] -rw-r--r-- 3 boinc boinc 316754596 Jul 25 01:45 ATLAS.root_0
[2025-07-25 06:55:27] drwxrwx--x 2 boinc boinc      4096 Jul 25 01:45 shared
[2025-07-25 06:55:27] -rw-r--r-- 2 boinc boinc    542899 Jul 25 01:45 input.tar.gz
[2025-07-25 06:55:27] -rw-r--r-- 2 boinc boinc     15095 Jul 25 01:45 start_atlas.sh
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc         0 Jul 25 01:45 boinc_lockfile
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc      6639 Jul 25 02:48 init_data.xml
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc      2634 Jul 25 02:48 pandaJob.out
[2025-07-25 06:55:27] -rw------- 1 boinc boinc    979709 Jul 25 02:48 agis_schedconf.cvmfs.json
[2025-07-25 06:55:27] -rw------- 1 boinc boinc 259221793 Jul 25 06:54 HITS.45697453._006032.pool.root.1
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc       531 Jul 25 06:54 boinc_task_state.xml
[2025-07-25 06:55:27] -rw------- 1 boinc boinc        97 Jul 25 06:54 pilot_heartbeat.json
[2025-07-25 06:55:27] -rw------- 1 boinc boinc      1037 Jul 25 06:55 memory_monitor_summary.json
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc      8192 Jul 25 06:55 boinc_mmap_file
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc        28 Jul 25 06:55 wrapper_checkpoint.txt
[2025-07-25 06:55:27] -rw------- 1 boinc boinc   1593052 Jul 25 06:55 agis_ddmendpoints.agis.ALL.json
[2025-07-25 06:55:27] -rw------- 1 boinc boinc    337629 Jul 25 06:55 log.45697453._006032.job.log.tgz.1
[2025-07-25 06:55:27] -rw------- 1 boinc boinc      7825 Jul 25 06:55 heartbeat.json
[2025-07-25 06:55:27] -rw------- 1 boinc boinc      4676 Jul 25 06:55 pilotlog.txt
[2025-07-25 06:55:27] -rw------- 1 boinc boinc   1383394 Jul 25 06:55 log.45697453._006032.job.log.1
[2025-07-25 06:55:27] -rw------- 1 boinc boinc       357 Jul 25 06:55 output.list
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc       620 Jul 25 06:55 runtime_log
[2025-07-25 06:55:27] -rw------- 1 boinc boinc   1740800 Jul 25 06:55 result.tar.gz
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc      9104 Jul 25 06:55 runtime_log.err
[2025-07-25 06:55:27] -rw------- 1 boinc boinc       789 Jul 25 06:55 EAYNDmJNLy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOdILDmtdC9zm.diag
[2025-07-25 06:55:27] -rw-r--r-- 1 boinc boinc     22744 Jul 25 06:55 stderr.txt
[2025-07-25 06:55:27] HITS file was successfully produced:
[2025-07-25 06:55:27] -rw------- 1 boinc boinc 259221793 Jul 25 06:54 shared/HITS.pool.root.1
[2025-07-25 06:55:27]  *** Contents of shared directory: ***
[2025-07-25 06:55:27] total 564736
[2025-07-25 06:55:27] -rw-r--r-- 3 boinc boinc 316754596 Jul 25 01:45 ATLAS.root_0
[2025-07-25 06:55:27] -rw-r--r-- 2 boinc boinc    542899 Jul 25 01:45 input.tar.gz
[2025-07-25 06:55:27] -rw-r--r-- 2 boinc boinc     15095 Jul 25 01:45 start_atlas.sh
[2025-07-25 06:55:27] -rw------- 1 boinc boinc 259221793 Jul 25 06:54 HITS.pool.root.1
[2025-07-25 06:55:27] -rw------- 1 boinc boinc   1740800 Jul 25 06:55 result.tar.gz
06:55:29 (3855764): run_atlas exited; CPU time 57737.592128
06:55:29 (3855764): called boinc_finish(0)

</stderr_txt>
]]>

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