Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:47 (16401): wrapper (7.7.26015): starting
01:40:47 (16401): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 01:40:47] Arguments: --nthreads 8
[2025-07-23 01:40:47] Threads: 8
[2025-07-23 01:40:47] Checking for CVMFS
[2025-07-23 01:40:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 01:40:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 01:40:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 01:40:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 01:40:50] 2.11.2.0 8420 103016 137540 148638 3 146 15106886 25165825 2675 130560 0 74372186 99.860 53544245 3750 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 01:40:50] CVMFS is ok
[2025-07-23 01:40:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 01:40:50] Checking for apptainer binary...
[2025-07-23 01:40:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 01:40:50] Running /usr/bin/apptainer --version
[2025-07-23 01:40:51] apptainer version 1.3.2-1.el7
[2025-07-23 01:40:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 01:41:01] cg-vwn396.simple-grid.lan
[2025-07-23 01:41:01] apptainer works
[2025-07-23 01:41:01] Set ATHENA_PROC_NUMBER=8
[2025-07-23 01:41:01] Set ATHENA_CORE_NUMBER=8
[2025-07-23 01:41:01] Starting ATLAS job with PandaID=6741761623
[2025-07-23 01:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 08:29:33]  *** The last 200 lines of the pilot log: ***
[2025-07-23 08:29:33] 2025-07-23 05:36:31,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 08:29:33] 2025-07-23 05:36:31,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 08:29:33] 2025-07-23 05:36:31,038 | INFO     | fitting pss+swap vs Time
[2025-07-23 08:29:33] 2025-07-23 05:36:31,038 | INFO     | sum of square deviations: 12955770358.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,042 | INFO     | sum of deviations: -10111247760.000015
[2025-07-23 08:29:33] 2025-07-23 05:36:31,042 | INFO     | mean x: 1753238288.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,042 | INFO     | mean y: 2559305.7838616716
[2025-07-23 08:29:33] 2025-07-23 05:36:31,042 | INFO     | -- intersect: 1370862866.4702268
[2025-07-23 08:29:33] 2025-07-23 05:36:31,042 | INFO     | intersect: 1370862866.4702268
[2025-07-23 08:29:33] 2025-07-23 05:36:31,043 | INFO     | chi2: 2.5566450630644253
[2025-07-23 08:29:33] 2025-07-23 05:36:31,043 | INFO     | sum of square deviations: 12403750705.5
[2025-07-23 08:29:33] 2025-07-23 05:36:31,047 | INFO     | sum of deviations: 13369348711.00001
[2025-07-23 08:29:33] 2025-07-23 05:36:31,047 | INFO     | mean x: 1753238135.5
[2025-07-23 08:29:33] 2025-07-23 05:36:31,047 | INFO     | mean y: 2565716.169590643
[2025-07-23 08:29:33] 2025-07-23 05:36:31,047 | INFO     | -- intersect: -1887157204.2152498
[2025-07-23 08:29:33] 2025-07-23 05:36:31,047 | INFO     | intersect: -1887157204.2152498
[2025-07-23 08:29:33] 2025-07-23 05:36:31,054 | INFO     | chi2: 1.7856729256547095
[2025-07-23 08:29:33] 2025-07-23 05:36:31,054 | INFO     | current chi2=1.7856729256547095 (change=30.15561872658301 %)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,055 | INFO     | sum of square deviations: 11867638328.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,058 | INFO     | sum of deviations: 12820619428.999992
[2025-07-23 08:29:33] 2025-07-23 05:36:31,058 | INFO     | mean x: 1753237983.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,058 | INFO     | mean y: 2565560.0741839763
[2025-07-23 08:29:33] 2025-07-23 05:36:31,059 | INFO     | -- intersect: -1891458872.3588364
[2025-07-23 08:29:33] 2025-07-23 05:36:31,059 | INFO     | intersect: -1891458872.3588364
[2025-07-23 08:29:33] 2025-07-23 05:36:31,059 | INFO     | chi2: 1.7856952805322537
[2025-07-23 08:29:33] 2025-07-23 05:36:31,059 | INFO     | current chi2=1.7856952805322537 (change=-0.0012519021385738855 %)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,059 | INFO     | right removable region: 336
[2025-07-23 08:29:33] 2025-07-23 05:36:31,060 | INFO     | sum of square deviations: 12403750705.5
[2025-07-23 08:29:33] 2025-07-23 05:36:31,063 | INFO     | sum of deviations: -70659482888.5
[2025-07-23 08:29:33] 2025-07-23 05:36:31,063 | INFO     | mean x: 1753238440.5
[2025-07-23 08:29:33] 2025-07-23 05:36:31,064 | INFO     | mean y: 2575941.0204678364
[2025-07-23 08:29:33] 2025-07-23 05:36:31,064 | INFO     | -- intersect: 9990113140.63854
[2025-07-23 08:29:33] 2025-07-23 05:36:31,064 | INFO     | intersect: 9990113140.63854
[2025-07-23 08:29:33] 2025-07-23 05:36:31,064 | INFO     | chi2: 1.0044196406504824
[2025-07-23 08:29:33] 2025-07-23 05:36:31,064 | INFO     | current chi2=1.0044196406504824 (change=60.713371787064844 %)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,065 | INFO     | sum of square deviations: 11867638328.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,075 | INFO     | sum of deviations: -72570438276.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,076 | INFO     | mean x: 1753238593.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,076 | INFO     | mean y: 2576469.483679525
[2025-07-23 08:29:33] 2025-07-23 05:36:31,076 | INFO     | -- intersect: 10723605336.382898
[2025-07-23 08:29:33] 2025-07-23 05:36:31,076 | INFO     | intersect: 10723605336.382898
[2025-07-23 08:29:33] 2025-07-23 05:36:31,076 | INFO     | chi2: 0.9846290437582566
[2025-07-23 08:29:33] 2025-07-23 05:36:31,077 | INFO     | current chi2=0.9846290437582566 (change=1.9703514438854515 %)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,077 | INFO     | left removable region: 20
[2025-07-23 08:29:33] 2025-07-23 05:36:31,077 | INFO     | sum of square deviations: 9784425315.0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,080 | INFO     | sum of deviations: -29884294303.999985
[2025-07-23 08:29:33] 2025-07-23 05:36:31,080 | INFO     | mean x: 1753238562.5
[2025-07-23 08:29:33] 2025-07-23 05:36:31,080 | INFO     | mean y: 2577543.474683544
[2025-07-23 08:29:33] 2025-07-23 05:36:31,080 | INFO     | -- intersect: 5357444640.937103
[2025-07-23 08:29:33] 2025-07-23 05:36:31,081 | INFO     | intersect: 5357444640.937103
[2025-07-23 08:29:33] 2025-07-23 05:36:31,081 | INFO     | chi2: 0.16421883039329366
[2025-07-23 08:29:33] 2025-07-23 05:36:31,081 | INFO     | -- intersect: 5357444640.937103
[2025-07-23 08:29:33] 2025-07-23 05:36:31,081 | INFO     | current memory leak: -3.05 B/s (using 316 data points, chi2=0.16)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,088 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,088 | INFO     | ..............................
[2025-07-23 08:29:33] 2025-07-23 05:36:31,088 | INFO     | . Timing measurements:
[2025-07-23 08:29:33] 2025-07-23 05:36:31,088 | INFO     | . get job = 0 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,088 | INFO     | . initial setup = 2 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,088 | INFO     | . payload setup = 11 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,089 | INFO     | . stage-in = 0 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,089 | INFO     | . payload execution = 21174 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,089 | INFO     | . stage-out = 2 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,089 | INFO     | . log creation = 0 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,089 | INFO     | ..............................
[2025-07-23 08:29:33] 2025-07-23 05:36:31,456 | INFO     | 
[2025-07-23 08:29:33] 2025-07-23 05:36:31,456 | INFO     | job summary report
[2025-07-23 08:29:33] 2025-07-23 05:36:31,456 | INFO     | --------------------------------------------------
[2025-07-23 08:29:33] 2025-07-23 05:36:31,456 | INFO     | PanDA job id: 6741761623
[2025-07-23 08:29:33] 2025-07-23 05:36:31,456 | INFO     | task id: 45697472
[2025-07-23 08:29:33] 2025-07-23 05:36:31,456 | INFO     | errors: (none)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | pilot state: finished 
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | transexitcode: 0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | exeerrorcode: 0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | exeerrordiag: 
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | exitcode: 0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | exitmsg: OK
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | cpuconsumptiontime: 79640 s
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | nevents: 400
[2025-07-23 08:29:33] 2025-07-23 05:36:31,457 | INFO     | neventsw: 0
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | pid: 27010
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | pgrp: 27010
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | corecount: 8
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | event service: False
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | sizes: {0: 2397361, 1: 2397560, 9: 2397822, 12: 2397850, 21190: 2431019, 21193: 2440201, 21289: 2440339}
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | --------------------------------------------------
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | 
[2025-07-23 08:29:33] 2025-07-23 05:36:31,458 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-07-23 08:29:33] 2025-07-23 05:36:31,971 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 08:29:33] 2025-07-23 05:36:31,974 | INFO     | job 6741761623 has completed (purged errors)
[2025-07-23 08:29:33] 2025-07-23 05:36:31,974 | INFO     | overall cleanup function is called
[2025-07-23 08:29:33] 2025-07-23 05:36:32,983 | INFO     | --- collectZombieJob: --- 10, [27010]
[2025-07-23 08:29:33] 2025-07-23 05:36:32,983 | INFO     | zombie collector waiting for pid 27010
[2025-07-23 08:29:33] 2025-07-23 05:36:32,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 08:29:33] 2025-07-23 05:36:32,983 | INFO     | collected zombie processes
[2025-07-23 08:29:33] 2025-07-23 05:36:32,983 | INFO     | will attempt to kill all subprocesses of pid=27010
[2025-07-23 08:29:33] 2025-07-23 05:36:33,109 | INFO     | process IDs to be killed: [27010] (in reverse order)
[2025-07-23 08:29:33] 2025-07-23 05:36:34,039 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 08:29:33] 2025-07-23 05:36:34,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 08:29:33] 2025-07-23 05:36:34,043 | INFO     | did not find any defunct processes belonging to 27010
[2025-07-23 08:29:33] 2025-07-23 05:36:34,045 | INFO     | did not find any defunct processes belonging to 27010
[2025-07-23 08:29:33] 2025-07-23 05:36:34,046 | INFO     | ready for new job
[2025-07-23 08:29:33] 2025-07-23 05:36:34,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 08:29:33] 2025-07-23 05:36:34,048 | INFO     | ***************************************
[2025-07-23 08:29:33] 2025-07-23 05:36:34,048 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 08:29:33] 2025-07-23 05:36:34,048 | INFO     | ***************************************
[2025-07-23 08:29:33] 2025-07-23 05:36:34,048 | INFO     | 
[2025-07-23 08:29:33] 2025-07-23 05:36:34,049 | INFO     | pilot is running in a VM
[2025-07-23 08:29:33] 2025-07-23 05:36:34,049 | INFO     | architecture information:
[2025-07-23 08:29:33] 2025-07-23 05:36:34,055 | INFO     | executing command: cat /etc/os-release
[2025-07-23 08:29:33] 2025-07-23 05:36:34,239 | INFO     | cat /etc/os-release:
[2025-07-23 08:29:33] NAME="CentOS Linux"
[2025-07-23 08:29:33] VERSION="7 (Core)"
[2025-07-23 08:29:33] ID="centos"
[2025-07-23 08:29:33] ID_LIKE="rhel fedora"
[2025-07-23 08:29:33] VERSION_ID="7"
[2025-07-23 08:29:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 08:29:33] ANSI_COLOR="0;31"
[2025-07-23 08:29:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 08:29:33] HOME_URL="https://www.centos.org/"
[2025-07-23 08:29:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 08:29:33] 
[2025-07-23 08:29:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 08:29:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 08:29:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 08:29:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 08:29:33] 
[2025-07-23 08:29:33] 2025-07-23 05:36:34,240 | INFO     | ***************************************
[2025-07-23 08:29:33] 2025-07-23 05:36:34,743 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-07-23 08:29:33] 2025-07-23 05:36:34,833 | INFO     | sufficient remaining disk space (497141415936 B)
[2025-07-23 08:29:33] 2025-07-23 05:36:34,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 08:29:33] 2025-07-23 05:36:34,834 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 08:29:33] 2025-07-23 05:36:34,834 | INFO     | update_server=False
[2025-07-23 08:29:33] 2025-07-23 05:36:34,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 08:29:33] 2025-07-23 05:36:34,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 08:29:33] 2025-07-23 05:36:34,835 | INFO     | aborting loop
[2025-07-23 08:29:33] 2025-07-23 05:36:34,976 | INFO     | all payload control threads have been joined
[2025-07-23 08:29:33] 2025-07-23 05:36:35,477 | INFO     | all data control threads have been joined
[2025-07-23 08:29:33] 2025-07-23 05:36:35,840 | INFO     | [job] retrieve thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:35,841 | INFO     | [job] job monitor thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:35,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 08:29:33] 2025-07-23 05:36:35,882 | INFO     | [payload] failed_post thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:35,904 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:35,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:35,982 | INFO     | [payload] control thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:36,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 08:29:33] 2025-07-23 05:36:36,141 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:36,141 | INFO     | [job] validate thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:36,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 08:29:33] 2025-07-23 05:36:36,457 | INFO     | all job control threads have been joined
[2025-07-23 08:29:33] 2025-07-23 05:36:36,483 | INFO     | [data] control thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:36,491 | INFO     | [payload] validate_post thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:36,520 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:36,927 | INFO     | [data] copytool_in thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:37,243 | INFO     | [job] queue monitor thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:37,463 | INFO     | [job] control thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:37,869 | INFO     | [data] copytool_out thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:40,104 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 08:29:33] 2025-07-23 05:36:42,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647491921728)>', '<ExcThread(monitor, started 139647195784960)>']
[2025-07-23 08:29:33] 2025-07-23 05:36:47,158 | INFO     | all workflow threads have been joined
[2025-07-23 08:29:33] 2025-07-23 05:36:47,158 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 08:29:33] 2025-07-23 05:36:47,158 | INFO     | traces error code: 0
[2025-07-23 08:29:33] 2025-07-23 05:36:47,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 08:29:33] 2025-07-23 05:37:03,688 | INFO     | PID=20428 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 08:29:33] 2025-07-23 05:37:03,689 | INFO     | .. there are 9 such processes running
[2025-07-23 08:29:33] 2025-07-23 05:37:03,690 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 08:29:33] 2025-07-23 05:37:03,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 08:29:33] 2025-07-23 05:37:03,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 08:29:33] 2025-07-23 05:37:03,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 08:29:33] 2025-07-23 05:37:03,691 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 08:29:33] 2025-07-23 05:37:03,691 | INFO     | [monitor] control thread has ended
[2025-07-23 08:29:33] 2025-07-23 05:37:03,955 [wrapper] ==== pilot stdout END ====
[2025-07-23 08:29:33] 2025-07-23 05:37:04,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 08:29:33] 2025-07-23 05:37:04,179 [wrapper] pilotpid: 20428
[2025-07-23 08:29:33] 2025-07-23 05:37:04,277 [wrapper] Pilot exit status: 0
[2025-07-23 08:29:33] 2025-07-23 05:37:04,747 [wrapper] pandaids: 6741761623
[2025-07-23 08:29:33] 2025-07-23 05:37:05,780 [wrapper] cleanup supervisor_pilot 29287 20429
[2025-07-23 08:29:33] 2025-07-23 05:37:05,843 [wrapper] Test setup, not cleaning
[2025-07-23 08:29:33] 2025-07-23 05:37:05,934 [wrapper] apfmon messages muted
[2025-07-23 08:29:33] 2025-07-23 05:37:06,001 [wrapper] ==== wrapper stdout END ====
[2025-07-23 08:29:33] 2025-07-23 05:37:06,081 [wrapper] ==== wrapper stderr END ====
[2025-07-23 08:29:33]  *** Error codes and diagnostics ***
[2025-07-23 08:29:33]     "exeErrorCode": 0,
[2025-07-23 08:29:33]     "exeErrorDiag": "",
[2025-07-23 08:29:33]     "pilotErrorCode": 0,
[2025-07-23 08:29:33]     "pilotErrorDiag": "",
[2025-07-23 08:29:33]  *** Listing of results directory ***
[2025-07-23 08:29:33] total 600144
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc    530466 Jul 22 10:57 pilot3.tar.gz
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc      5112 Jul 22 10:59 queuedata.json
[2025-07-23 08:29:33] -rwx------. 1 boinc boinc     36292 Jul 22 11:00 runpilot2-wrapper.sh
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc       100 Jul 23 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 08:29:33] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 01:40 run_atlas
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc       105 Jul 23 01:40 job.xml
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc      6391 Jul 23 01:40 init_data.xml
[2025-07-23 08:29:33] -rw-r--r--. 2 boinc boinc 328883305 Jul 23 01:40 EVNT.45697470._000098.pool.root.1
[2025-07-23 08:29:33] -rw-r--r--. 2 boinc boinc     15095 Jul 23 01:40 start_atlas.sh
[2025-07-23 08:29:33] drwxrwx--x. 2 boinc boinc        68 Jul 23 01:40 shared
[2025-07-23 08:29:33] -rw-r--r--. 2 boinc boinc    542898 Jul 23 01:40 input.tar.gz
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc         0 Jul 23 01:40 boinc_lockfile
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc      2611 Jul 23 01:41 pandaJob.out
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc    977736 Jul 23 01:41 agis_schedconf.cvmfs.json
[2025-07-23 08:29:33] drwx------. 4 boinc boinc      4096 Jul 23 01:41 pilot3
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc 277295175 Jul 23 07:33 HITS.45697472._001805.pool.root.1
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc       531 Jul 23 07:33 boinc_task_state.xml
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc      1021 Jul 23 07:34 memory_monitor_summary.json
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc   1593031 Jul 23 07:34 agis_ddmendpoints.agis.ALL.json
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc    437143 Jul 23 07:34 log.45697472._001805.job.log.tgz.1
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc      7770 Jul 23 07:36 heartbeat.json
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc        95 Jul 23 07:37 pilot_heartbeat.json
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc       890 Jul 23 07:37 pilotlog.txt
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc   1819093 Jul 23 07:37 log.45697472._001805.job.log.1
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc       357 Jul 23 07:37 output.list
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc       620 Jul 23 07:37 runtime_log
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc   2273280 Jul 23 07:37 result.tar.gz
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc      8660 Jul 23 07:37 runtime_log.err
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc       658 Jul 23 07:37 GcSKDmD2Ny7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgzILDmwgeTYo.diag
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc      8192 Jul 23 08:29 boinc_mmap_file
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc        28 Jul 23 08:29 wrapper_checkpoint.txt
[2025-07-23 08:29:33] -rw-r--r--. 1 boinc boinc     20564 Jul 23 08:29 stderr.txt
[2025-07-23 08:29:33] HITS file was successfully produced:
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc 277295175 Jul 23 07:33 shared/HITS.pool.root.1
[2025-07-23 08:29:33]  *** Contents of shared directory: ***
[2025-07-23 08:29:33] total 594744
[2025-07-23 08:29:33] -rw-r--r--. 2 boinc boinc 328883305 Jul 23 01:40 ATLAS.root_0
[2025-07-23 08:29:33] -rw-r--r--. 2 boinc boinc     15095 Jul 23 01:40 start_atlas.sh
[2025-07-23 08:29:33] -rw-r--r--. 2 boinc boinc    542898 Jul 23 01:40 input.tar.gz
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc 277295175 Jul 23 07:33 HITS.pool.root.1
[2025-07-23 08:29:33] -rw-------. 1 boinc boinc   2273280 Jul 23 07:37 result.tar.gz
08:29:35 (16401): run_atlas exited; CPU time 79898.458859
08:29:35 (16401): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN