Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-23 11:58:03 (20224): Detected: vboxwrapper 26206
2025-07-23 11:58:03 (20224): Detected: BOINC client v8.0.2
2025-07-23 11:58:05 (20224): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-23 11:58:05 (20224): Successfully copied 'init_data.xml' to the shared directory.
2025-07-23 11:58:05 (20224): Create VM. (boinc_ccf503b2b03f97e0, slot#2)
2025-07-23 11:58:06 (20224): Setting Memory Size for VM. (4400MB)
2025-07-23 11:58:06 (20224): Setting CPU Count for VM. (4)
2025-07-23 11:58:07 (20224): Setting Chipset Options for VM.
2025-07-23 11:58:07 (20224): Setting Graphics Controller Options for VM.
2025-07-23 11:58:07 (20224): Setting Boot Options for VM.
2025-07-23 11:58:08 (20224): Setting Network Configuration for NAT.
2025-07-23 11:58:08 (20224): Enabling VM Network Access.
2025-07-23 11:58:08 (20224): Disabling USB Support for VM.
2025-07-23 11:58:09 (20224): Disabling COM Port Support for VM.
2025-07-23 11:58:09 (20224): Disabling LPT Port Support for VM.
2025-07-23 11:58:10 (20224): Disabling Audio Support for VM.
2025-07-23 11:58:10 (20224): Disabling Clipboard Support for VM.
2025-07-23 11:58:11 (20224): Disabling Drag and Drop Support for VM.
2025-07-23 11:58:11 (20224): Adding storage controller(s) to VM.
2025-07-23 11:58:11 (20224): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-23 11:58:14 (20224): Adding VirtualBox Guest Additions to VM.
2025-07-23 11:58:14 (20224): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-23 11:58:15 (20224): forwarding host port 50588 to guest port 80
2025-07-23 11:58:15 (20224): Enabling remote desktop for VM.
2025-07-23 11:58:15 (20224): Required extension pack not installed, remote desktop not enabled.
2025-07-23 11:58:15 (20224): Enabling shared directory for VM.
2025-07-23 11:58:16 (20224): Starting VM using VBoxManage interface. (boinc_ccf503b2b03f97e0, slot#2)
2025-07-23 11:58:24 (20224): Successfully started VM. (PID = '13996')
2025-07-23 11:58:24 (20224): Reporting VM Process ID to BOINC.
2025-07-23 11:58:24 (20224): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-23 11:58:24 (20224): Guest Log: CPUID EDX: 0x178bfbff
2025-07-23 11:58:24 (20224): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-23 11:58:24 (20224): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-23 11:58:24 (20224): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-23 11:58:24 (20224): Detected: Web Application Enabled (http://localhost:50588)
2025-07-23 11:58:24 (20224): Preference change detected
2025-07-23 11:58:24 (20224): Setting CPU throttle for VM. (50%)
2025-07-23 11:58:24 (20224): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-23 11:58:26 (20224): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-23 11:58:26 (20224): Guest Log: BIOS: Booting from Hard Disk...
2025-07-23 11:58:29 (20224): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-23 11:58:29 (20224): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-23 11:58:29 (20224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-23 11:58:37 (20224): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-23 11:58:37 (20224): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-23 11:58:47 (20224): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000141 main     Log opened 2025-07-23T11:58:45.917691000Z
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000253 main     OS Product: Linux
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000347 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000388 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000424 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000425 main     Process ID: 1303
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.000426 main     Package type: LINUX_64BITS_GENERIC
2025-07-23 11:58:47 (20224): Guest Log: 00:00:00.024416 main     5.2.32 r132073 started. Verbose level = 0
2025-07-23 11:58:47 (20224): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-23 11:58:47 (20224): Guest Log: [INFO] Mounting shared directory
2025-07-23 11:58:47 (20224): Guest Log: [INFO] Checking for init_data.xml
2025-07-23 11:58:52 (20224): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-23 11:58:52 (20224): Guest Log: [INFO] Detected branch: prod
2025-07-23 11:58:52 (20224): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-23 11:58:52 (20224): Guest Log: Copying input files
2025-07-23 11:58:55 (20224): Guest Log: Copied input files into RunAtlas.
2025-07-23 11:58:55 (20224): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-23 11:58:55 (20224): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-23 11:58:55 (20224): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-23 11:58:55 (20224): Guest Log: Further information can be found at the LHC@home message board.
2025-07-23 11:58:57 (20224): Guest Log: 00:00:10.026063 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 949 644 000ns (GuestNow=1 753 289 936 893 113 000 ns GuestLast=1 753 271 925 943 469 000 ns fSetTimeLastLoop=true )
2025-07-23 11:59:03 (20224): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-23 11:59:04 (20224): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-23 11:59:04 (20224): Guest Log: 2.6.3.0 1582 0 32052 148665 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-23 11:59:05 (20224): Guest Log: copied the webapp to /var/www
2025-07-23 11:59:05 (20224): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-23 11:59:05 (20224): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-23 11:59:05 (20224): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-23 11:59:05 (20224): Guest Log:  *** Starting ATLAS job. (PandaID=6741761342 taskID=45697472) ***
2025-07-23 13:38:44 (20224): Status Report: Elapsed Time: '6000.000000'
2025-07-23 13:38:44 (20224): Status Report: CPU Time: '13115.406250'
2025-07-23 15:19:46 (20224): Status Report: Elapsed Time: '12000.000000'
2025-07-23 15:19:46 (20224): Status Report: CPU Time: '27600.953125'
2025-07-23 16:59:53 (20224): Status Report: Elapsed Time: '18000.000000'
2025-07-23 16:59:53 (20224): Status Report: CPU Time: '42017.578125'
2025-07-23 18:40:05 (20224): Status Report: Elapsed Time: '24000.000000'
2025-07-23 18:40:05 (20224): Status Report: CPU Time: '56446.750000'
2025-07-23 20:20:12 (20224): Status Report: Elapsed Time: '30000.000000'
2025-07-23 20:20:12 (20224): Status Report: CPU Time: '70864.515625'
2025-07-23 21:36:15 (20224): Guest Log:  *** Job finished ***
2025-07-23 21:36:15 (20224): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:02,683 | INFO     | [data] queue_monitor thread has finished
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:06,613 | INFO     | job.realtimelogging is not enabled
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:07,654 | INFO     | [payload] run_realtimelog thread has finished
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:09,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159205566272)>', '<ExcThread(monitor, started 140158338856704)>']
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:10,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:10,300 | INFO     | [monitor] control thread has ended
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,251 | INFO     | all workflow threads have been joined
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,251 | INFO     | end of generic workflow (traces error code: 0)
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,251 | INFO     | traces error code: 0
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,398 [wrapper] ==== pilot stdout END ====
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,402 [wrapper] ==== wrapper stdout RESUME ====
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,406 [wrapper] pilotpid: 5897
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,411 [wrapper] Pilot exit status: 0
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,500 [wrapper] pandaids: 6741761342
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,535 [wrapper] cleanup supervisor_pilot  6891 5898
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,539 [wrapper] Test setup, not cleaning
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,545 [wrapper] apfmon messages muted
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,551 [wrapper] ==== wrapper stdout END ====
2025-07-23 21:36:15 (20224): Guest Log: 2025-07-24 02:36:14,563 [wrapper] ==== wrapper stderr END ====
2025-07-23 21:36:15 (20224): Guest Log:  *** Error codes and diagnostics ***
2025-07-23 21:36:15 (20224): Guest Log:     "exeErrorCode": 0,
2025-07-23 21:36:15 (20224): Guest Log:     "exeErrorDiag": "",
2025-07-23 21:36:15 (20224): Guest Log:     "pilotErrorCode": 0,
2025-07-23 21:36:15 (20224): Guest Log:     "pilotErrorDiag": "",
2025-07-23 21:36:15 (20224): Guest Log:  *** Listing of results directory ***
2025-07-23 21:36:15 (20224): Guest Log: total 285036
2025-07-23 21:36:15 (20224): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 22 08:26 pilot3.tar.gz
2025-07-23 21:36:15 (20224): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 22 08:50 queuedata.json
2025-07-23 21:36:15 (20224): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 22 08:50 runpilot2-wrapper.sh
2025-07-23 21:36:15 (20224): Guest Log: -rwxr-xr-x. 1 atlas atlas      9027 Jul 23 16:58 init_data.xml
2025-07-23 21:36:15 (20224): Guest Log: -rwxr-xr-x. 1 atlas atlas    542903 Jul 23 16:58 input.tar.gz
2025-07-23 21:36:15 (20224): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 23 16:58 start_atlas.sh
2025-07-23 21:36:15 (20224): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 23 16:58 EVNT.45697470._000091.pool.root.1 -> /data/./ATLAS.root_0
2025-07-23 21:36:15 (20224): Guest Log: -rw-r--r--. 1 atlas atlas      2611 Jul 23 16:59 pandaJob.out
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas    978487 Jul 23 16:59 agis_schedconf.cvmfs.json
2025-07-23 21:36:15 (20224): Guest Log: drwx------. 4 atlas atlas      4096 Jul 23 16:59 pilot3
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas 282473246 Jul 24 02:34 HITS.45697472._001606.pool.root.1
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas      1030 Jul 24 02:35 memory_monitor_summary.json
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas   1593041 Jul 24 02:35 agis_ddmendpoints.agis.ALL.json
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas    450048 Jul 24 02:35 log.45697472._001606.job.log.tgz.1
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas        95 Jul 24 02:35 pilot_heartbeat.json
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas      7824 Jul 24 02:35 heartbeat.json
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 24 02:36 pilotlog.txt
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas   2346235 Jul 24 02:36 log.45697472._001606.job.log.1
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas       357 Jul 24 02:36 output.list
2025-07-23 21:36:15 (20224): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 24 02:36 runtime_log
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas   2816000 Jul 24 02:36 result.tar.gz
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas       674 Jul 24 02:36 W1FODmPsNy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjhuKDm0zs9Fn.diag
2025-07-23 21:36:15 (20224): Guest Log: -rw-r--r--. 1 atlas atlas      8639 Jul 24 02:36 runtime_log.err
2025-07-23 21:36:15 (20224): Guest Log: Looking for outputfile HITS.45697472._001606.pool.root.1
2025-07-23 21:36:15 (20224): Guest Log: HITS file was successfully produced
2025-07-23 21:36:15 (20224): Guest Log: -rw-------. 1 atlas atlas 282473246 Jul 24 02:34 /home/atlas/RunAtlas/HITS.45697472._001606.pool.root.1
2025-07-23 21:36:18 (20224): Guest Log: Successfully finished the ATLAS job!
2025-07-23 21:36:18 (20224): Guest Log: Copying the results back to the shared directory!
2025-07-23 21:36:18 (20224): Guest Log:  *** Contents of shared directory: ***
2025-07-23 21:36:18 (20224): Guest Log: total 601324
2025-07-23 21:36:18 (20224): Guest Log: -rwxrwxrwx. 1 root root 329883664 Jul 23 16:58 ATLAS.root_0
2025-07-23 21:36:18 (20224): Guest Log: -rwxrwxrwx. 1 root root 282473246 Jul 24 02:36 HITS.pool.root.1
2025-07-23 21:36:18 (20224): Guest Log: -rwxrwxrwx. 1 root root      9027 Jul 23 16:58 init_data.xml
2025-07-23 21:36:18 (20224): Guest Log: -rwxrwxrwx. 1 root root    542903 Jul 22 15:06 input.tar.gz
2025-07-23 21:36:18 (20224): Guest Log: -rwxrwxrwx. 1 root root   2816000 Jul 24 02:36 result.tar.gz
2025-07-23 21:36:18 (20224): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 22 15:06 start_atlas.sh
2025-07-23 21:36:18 (20224): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-23 21:36:18 (20224): VM Completion File Detected.
2025-07-23 21:36:18 (20224): Powering off VM.
2025-07-23 21:36:19 (20224): Successfully stopped VM.
2025-07-23 21:36:19 (20224): Deregistering VM. (boinc_ccf503b2b03f97e0, slot#2)
2025-07-23 21:36:19 (20224): Removing network bandwidth throttle group from VM.
2025-07-23 21:36:20 (20224): Removing VM from VirtualBox.
21:36:25 (20224): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN