Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:33 (516574): wrapper (7.7.26015): starting
08:08:33 (516574): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 08:08:33] Arguments: --nthreads 12
[2025-07-22 08:08:33] Threads: 12
[2025-07-22 08:08:33] Checking for CVMFS
[2025-07-22 08:08:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 08:08:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 08:08:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 08:08:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 08:08:34] 2.11.5.0 7108 30104 215116 148624 1 374 33949845 45568000 7955 130560 0 217157412 99.750 161090987 29774 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 08:08:34] CVMFS is ok
[2025-07-22 08:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 08:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 08:08:34] Further information can be found at the LHC@home message board.
[2025-07-22 08:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 08:08:34] Checking for apptainer binary...
[2025-07-22 08:08:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 08:08:34] Running /usr/bin/apptainer --version
[2025-07-22 08:08:34] apptainer version 1.4.1-1.el9
[2025-07-22 08:08:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 08:08:34] wns0058.triumf.lcg
[2025-07-22 08:08:34] apptainer works
[2025-07-22 08:08:34] Set ATHENA_PROC_NUMBER=12
[2025-07-22 08:08:34] Set ATHENA_CORE_NUMBER=12
[2025-07-22 08:08:34] Starting ATLAS job with PandaID=6742271262
[2025-07-22 08:08:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 08:11:33]  *** The last 200 lines of the pilot log: ***
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | WARNING  | found no stored workdir sizes
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | WARNING  | wrong length of table data, x=[1753196943.0], y=[1040.0] (must be same and length>=4)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | could have reported an average CPU frequency of 2827 MHz (4 samples)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | ..............................
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . Timing measurements:
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . get job = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . initial setup = 3 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . payload setup = 3 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . stage-in = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . payload execution = 13 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . stage-out = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . log creation = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | ..............................
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742271262/pilotlog.txt
[2025-07-22 08:11:33] 2025-07-22 15:11:19,322 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 08:11:33] - Log from pilotlog.txt -
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | WARNING  | found no stored workdir sizes
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | WARNING  | wrong length of table data, x=[1753196943.0], y=[1040.0] (must be same and length>=4)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | could have reported an average CPU frequency of 2827 MHz (4 samples)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | ..............................
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . Timing measurements:
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . get job = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . initial setup = 3 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . payload setup = 3 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . stage-in = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . payload execution = 13 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . stage-out = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . log creation = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | ..............................
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742271262/pilotlog.txt
[2025-07-22 08:11:33] 2025-07-22 15:11:19,323 | WARNING  | 
[2025-07-22 08:11:33] [begin log extracts]
[2025-07-22 08:11:33] - Log from pilotlog.txt -
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 08:11:33] 2025-07-22 15:11:19,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | WARNING  | found no stored workdir sizes
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | WARNING  | wrong length of table data, x=[1753196943.0], y=[1040.0] (must be same and length>=4)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | could have reported an average CPU frequency of 2827 MHz (4 samples)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | ..............................
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . Timing measurements:
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . get job = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,313 | INFO     | . initial setup = 3 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . payload setup = 3 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . stage-in = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . payload execution = 13 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . stage-out = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | . log creation = 0 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | ..............................
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 08:11:33] 2025-07-22 15:11:19,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742271262/pilotlog.txt
[2025-07-22 08:11:33] [end log extracts]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,323 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,323 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | 
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | job summary report
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | --------------------------------------------------
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | PanDA job id: 6742271262
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | task id: 45697532
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 08:09:09,367 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 08:11:33] 2025-07-22 15:11:19,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | pilot state: failed 
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | transexitcode: 65
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | exeerrorcode: 65
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | exitcode: 65
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | nevents: 0
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | neventsw: 0
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | pid: 526548
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | pgrp: 526548
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | corecount: 12
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | event service: False
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | sizes: {0: 2397356, 1: 2397555, 3: 2397817, 11: 2397845, 21: 2421109, 22: 2425401, 24: 2425557, 143: 2425723}
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | --------------------------------------------------
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | 
[2025-07-22 08:11:33] 2025-07-22 15:11:19,380 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 08:11:33] 2025-07-22 15:11:19,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 08:11:33] 2025-07-22 15:11:19,394 | INFO     | job 6742271262 has completed (purged errors)
[2025-07-22 08:11:33] 2025-07-22 15:11:19,394 | INFO     | overall cleanup function is called
[2025-07-22 08:11:33] 2025-07-22 15:11:20,400 | INFO     | --- collectZombieJob: --- 10, [526548]
[2025-07-22 08:11:33] 2025-07-22 15:11:20,400 | INFO     | zombie collector waiting for pid 526548
[2025-07-22 08:11:33] 2025-07-22 15:11:20,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 08:11:33] 2025-07-22 15:11:20,400 | INFO     | collected zombie processes
[2025-07-22 08:11:33] 2025-07-22 15:11:20,400 | INFO     | will attempt to kill all subprocesses of pid=526548
[2025-07-22 08:11:33] 2025-07-22 15:11:20,533 | INFO     | process IDs to be killed: [526548] (in reverse order)
[2025-07-22 08:11:33] 2025-07-22 15:11:20,587 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 08:11:33] 2025-07-22 15:11:20,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 08:11:33] 2025-07-22 15:11:20,593 | INFO     | did not find any defunct processes belonging to 526548
[2025-07-22 08:11:33] 2025-07-22 15:11:20,599 | INFO     | did not find any defunct processes belonging to 526548
[2025-07-22 08:11:33] 2025-07-22 15:11:20,599 | INFO     | ready for new job
[2025-07-22 08:11:33] 2025-07-22 15:11:20,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 08:11:33] 2025-07-22 15:11:20,601 | INFO     | ***************************************
[2025-07-22 08:11:33] 2025-07-22 15:11:20,601 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 08:11:33] 2025-07-22 15:11:20,601 | INFO     | ***************************************
[2025-07-22 08:11:33] 2025-07-22 15:11:20,601 | INFO     | 
[2025-07-22 08:11:33] 2025-07-22 15:11:20,603 | INFO     | architecture information:
[2025-07-22 08:11:33] 2025-07-22 15:11:20,603 | INFO     | executing command: cat /etc/os-release
[2025-07-22 08:11:33] 2025-07-22 15:11:20,613 | INFO     | cat /etc/os-release:
[2025-07-22 08:11:33] NAME="CentOS Linux"
[2025-07-22 08:11:33] VERSION="7 (Core)"
[2025-07-22 08:11:33] ID="centos"
[2025-07-22 08:11:33] ID_LIKE="rhel fedora"
[2025-07-22 08:11:33] VERSION_ID="7"
[2025-07-22 08:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 08:11:33] ANSI_COLOR="0;31"
[2025-07-22 08:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 08:11:33] HOME_URL="https://www.centos.org/"
[2025-07-22 08:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 08:11:33] 
[2025-07-22 08:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 08:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 08:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 08:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 08:11:33] 
[2025-07-22 08:11:33] 2025-07-22 15:11:20,614 | INFO     | ***************************************
[2025-07-22 08:11:33] 2025-07-22 15:11:21,117 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 08:11:33] 2025-07-22 15:11:21,128 | INFO     | sufficient remaining disk space (1317222219776 B)
[2025-07-22 08:11:33] 2025-07-22 15:11:21,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 08:11:33] 2025-07-22 15:11:21,128 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 08:11:33] 2025-07-22 15:11:21,128 | INFO     | update_server=False
[2025-07-22 08:11:33] 2025-07-22 15:11:21,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 08:11:33] 2025-07-22 15:11:21,129 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-22 08:11:33] 2025-07-22 15:11:21,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 08:11:33] 2025-07-22 15:11:21,129 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 08:11:33] 2025-07-22 15:11:21,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 08:11:33] 2025-07-22 15:11:21,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 08:11:33] 2025-07-22 15:11:21,410 | INFO     | all payload control threads have been joined
[2025-07-22 08:11:33] 2025-07-22 15:11:21,624 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 08:11:33] 2025-07-22 15:11:21,625 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 08:11:33] 2025-07-22 15:11:21,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 08:11:33] 2025-07-22 15:11:21,625 | INFO     | will abort loop
[2025-07-22 08:11:33] 2025-07-22 15:11:21,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 08:11:33] 2025-07-22 15:11:21,924 | INFO     | all data control threads have been joined
[2025-07-22 08:11:33] 2025-07-22 15:11:22,133 | INFO     | [job] queue monitor thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,134 | INFO     | [job] retrieve thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,269 | INFO     | all job control threads have been joined
[2025-07-22 08:11:33] 2025-07-22 15:11:22,416 | INFO     | [payload] control thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,630 | INFO     | [job] job monitor thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,684 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,752 | INFO     | [job] validate thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,829 | INFO     | [data] copytool_in thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,875 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,930 | INFO     | [data] control thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:22,970 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:23,029 | INFO     | [payload] failed_post thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:23,094 | INFO     | [payload] validate_post thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:23,274 | INFO     | [job] control thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:23,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 08:11:33] 2025-07-22 15:11:23,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:23,690 | INFO     | [data] copytool_out thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:27,444 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 08:11:33] 2025-07-22 15:11:28,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083607738176)>', '<ExcThread(monitor, started 140082572949248)>']
[2025-07-22 08:11:33] 2025-07-22 15:11:29,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 08:11:33] 2025-07-22 15:11:29,169 | INFO     | [monitor] control thread has ended
[2025-07-22 08:11:33] 2025-07-22 15:11:33,614 | INFO     | all workflow threads have been joined
[2025-07-22 08:11:33] 2025-07-22 15:11:33,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 08:11:33] 2025-07-22 15:11:33,614 | INFO     | traces error code: 0
[2025-07-22 08:11:33] 2025-07-22 15:11:33,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 08:11:33] 2025-07-22 15:11:33,748 [wrapper] ==== pilot stdout END ====
[2025-07-22 08:11:33] 2025-07-22 15:11:33,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 08:11:33] 2025-07-22 15:11:33,752 [wrapper] pilotpid: 520185
[2025-07-22 08:11:33] 2025-07-22 15:11:33,753 [wrapper] Pilot exit status: 0
[2025-07-22 08:11:33] 2025-07-22 15:11:33,760 [wrapper] pandaids: 6742271262
[2025-07-22 08:11:33] 2025-07-22 15:11:33,793 [wrapper] cleanup supervisor_pilot  520191 520186
[2025-07-22 08:11:33] 2025-07-22 15:11:33,794 [wrapper] Test setup, not cleaning
[2025-07-22 08:11:33] 2025-07-22 15:11:33,796 [wrapper] apfmon messages muted
[2025-07-22 08:11:33] 2025-07-22 15:11:33,798 [wrapper] ==== wrapper stdout END ====
[2025-07-22 08:11:33] 2025-07-22 15:11:33,799 [wrapper] ==== wrapper stderr END ====
[2025-07-22 08:11:33]  *** Error codes and diagnostics ***
[2025-07-22 08:11:33]     "exeErrorCode": 65,
[2025-07-22 08:11:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 08:11:33]     "pilotErrorCode": 1305,
[2025-07-22 08:11:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 08:11:33]  *** Listing of results directory ***
[2025-07-22 08:11:33] total 332744
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc    530466 Jul 22 04:14 pilot3.tar.gz
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc      5112 Jul 22 04:50 queuedata.json
[2025-07-22 08:11:33] -rwx------. 1 boinc boinc     36292 Jul 22 04:54 runpilot2-wrapper.sh
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc       100 Jul 22 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 08:11:33] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 08:08 run_atlas
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc       105 Jul 22 08:08 job.xml
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc      6597 Jul 22 08:08 init_data.xml
[2025-07-22 08:11:33] -rw-r--r--. 2 boinc boinc 336661876 Jul 22 08:08 EVNT.45697530._000200.pool.root.1
[2025-07-22 08:11:33] -rw-r--r--. 2 boinc boinc     15095 Jul 22 08:08 start_atlas.sh
[2025-07-22 08:11:33] drwxrwx--x. 2 boinc boinc      4096 Jul 22 08:08 shared
[2025-07-22 08:11:33] -rw-r--r--. 2 boinc boinc    542907 Jul 22 08:08 input.tar.gz
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc         0 Jul 22 08:08 boinc_lockfile
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc      2611 Jul 22 08:08 pandaJob.out
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc    977712 Jul 22 08:08 agis_schedconf.cvmfs.json
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc   1593031 Jul 22 08:08 agis_ddmendpoints.agis.ALL.json
[2025-07-22 08:11:33] drwx------. 4 boinc boinc      4096 Jul 22 08:08 pilot3
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc       521 Jul 22 08:09 boinc_task_state.xml
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc       963 Jul 22 08:09 memory_monitor_summary.json
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc     20650 Jul 22 08:09 log.45697532._005044.job.log.tgz.1
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc        95 Jul 22 08:10 pilot_heartbeat.json
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc      8396 Jul 22 08:11 heartbeat.json
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc      8192 Jul 22 08:11 boinc_mmap_file
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc        22 Jul 22 08:11 wrapper_checkpoint.txt
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc      4665 Jul 22 08:11 pilotlog.txt
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc     75403 Jul 22 08:11 log.45697532._005044.job.log.1
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc       188 Jul 22 08:11 output.list
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc       620 Jul 22 08:11 runtime_log
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc    112640 Jul 22 08:11 result.tar.gz
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc      8485 Jul 22 08:11 runtime_log.err
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc       643 Jul 22 08:11 nwPNDmqkQy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2wuKDmvj6MCn.diag
[2025-07-22 08:11:33] -rw-r--r--. 1 boinc boinc     21593 Jul 22 08:11 stderr.txt
[2025-07-22 08:11:33] No HITS result produced
[2025-07-22 08:11:33]  *** Contents of shared directory: ***
[2025-07-22 08:11:33] total 329436
[2025-07-22 08:11:33] -rw-r--r--. 2 boinc boinc 336661876 Jul 22 08:08 ATLAS.root_0
[2025-07-22 08:11:33] -rw-r--r--. 2 boinc boinc     15095 Jul 22 08:08 start_atlas.sh
[2025-07-22 08:11:33] -rw-r--r--. 2 boinc boinc    542907 Jul 22 08:08 input.tar.gz
[2025-07-22 08:11:33] -rw-------. 1 boinc boinc    112640 Jul 22 08:11 result.tar.gz
08:11:35 (516574): run_atlas exited; CPU time 17.806120
08:11:35 (516574): called boinc_finish(0)

</stderr_txt>
]]>

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