Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:03 (749968): wrapper (7.7.26015): starting
16:46:03 (749968): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 16:46:03] Arguments: --nthreads 12
[2025-07-23 16:46:03] Threads: 12
[2025-07-23 16:46:03] Checking for CVMFS
[2025-07-23 16:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 16:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 16:46:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 16:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 16:46:04] 2.13.1.0 4489 27480 101788 148661 3 57 39263221 46080001 922 130560 0 14125291 99.993 798997 26742 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-23 16:46:04] CVMFS is ok
[2025-07-23 16:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 16:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 16:46:04] Further information can be found at the LHC@home message board.
[2025-07-23 16:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 16:46:04] Checking for apptainer binary...
[2025-07-23 16:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 16:46:04] Running /usr/bin/apptainer --version
[2025-07-23 16:46:04] apptainer version 1.4.1-1.el9
[2025-07-23 16:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 16:46:04] minis01.farm.particle.cz
[2025-07-23 16:46:04] apptainer works
[2025-07-23 16:46:04] Set ATHENA_PROC_NUMBER=12
[2025-07-23 16:46:04] Set ATHENA_CORE_NUMBER=12
[2025-07-23 16:46:04] Starting ATLAS job with PandaID=6741825423
[2025-07-23 16:46:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 18:06:01]  *** The last 200 lines of the pilot log: ***
[2025-07-23 18:06:01]  lfn=log.45697532._003778.job.log.tgz.1
[2025-07-23 18:06:01]  mtime=0
[2025-07-23 18:06:01]  protocol_id=None
[2025-07-23 18:06:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 18:06:01]  replicas=None
[2025-07-23 18:06:01]  scope=mc23_13p6TeV
[2025-07-23 18:06:01]  status=None
[2025-07-23 18:06:01]  status_code=0
[2025-07-23 18:06:01]  storage_token=
[2025-07-23 18:06:01]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6741825423/log.45697532._003778.job.log.tgz.1
[2025-07-23 18:06:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/c9/log.45697532._003778.job.log.tgz.1
[2025-07-23 18:06:01]  workdir=None
[2025-07-23 18:06:01] ]
[2025-07-23 18:06:01] 2025-07-23 16:05:25,173 | INFO     | transferring file log.45697532._003778.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6741825423/log.45697532._003778.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-23 18:06:01] 2025-07-23 16:05:25,173 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6741825423/log.45697532._003778.job.log.tgz.1 /scratch/.boinc/slots/2/log.45697532._003778.j
[2025-07-23 18:06:01] 2025-07-23 16:05:25,190 | INFO     | adding to output.list: log.45697532._003778.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/c9/log.45697532._003778.job.log.tg
[2025-07-23 18:06:01] 2025-07-23 16:05:25,191 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 18:06:01] 2025-07-23 16:05:25,191 | INFO     | summary of transferred files:
[2025-07-23 18:06:01] 2025-07-23 16:05:25,191 | INFO     |  -- lfn=log.45697532._003778.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 18:06:01] 2025-07-23 16:05:25,191 | INFO     | stage-out finished correctly
[2025-07-23 18:06:01] 2025-07-23 16:05:25,378 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 18:06:01] 2025-07-23 16:05:25,578 | INFO     | job 6741825423 has state=finished
[2025-07-23 18:06:01] 2025-07-23 16:05:25,579 | INFO     | preparing for final server update for job 6741825423 in state='finished'
[2025-07-23 18:06:01] 2025-07-23 16:05:25,579 | INFO     | this job has now completed (state=finished)
[2025-07-23 18:06:01] 2025-07-23 16:05:25,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 18:06:01] 2025-07-23 16:05:25,579 | INFO     | log transfer has been attempted: DONE
[2025-07-23 18:06:01] 2025-07-23 16:05:25,580 | INFO     | job 6741825423 has finished - writing final server update
[2025-07-23 18:06:01] 2025-07-23 16:05:25,580 | INFO     | total number of processed events: 400 (read)
[2025-07-23 18:06:01] 2025-07-23 16:05:25,581 | INFO     | executing command: lscpu
[2025-07-23 18:06:01] 2025-07-23 16:05:25,610 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 18:06:01] 2025-07-23 16:05:26,099 | INFO     | monitor loop #358: job 0:6741825423 is in state 'finished'
[2025-07-23 18:06:01] 2025-07-23 16:05:26,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 18:06:01] 2025-07-23 16:05:28,603 | INFO     | monitor loop #359: job 0:6741825423 is in state 'finished'
[2025-07-23 18:06:01] 2025-07-23 16:05:28,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,059 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 18:06:01] 2025-07-23 16:05:29,066 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2723.0097187499996
[2025-07-23 18:06:01] 2025-07-23 16:05:29,073 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6741825423/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,074 | INFO     | extracted standard info from prmon json
[2025-07-23 18:06:01] 2025-07-23 16:05:29,074 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 18:06:01] 2025-07-23 16:05:29,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 18:06:01] 2025-07-23 16:05:29,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 18:06:01] 2025-07-23 16:05:29,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 18:06:01] 2025-07-23 16:05:29,076 | INFO     | fitting pss+swap vs Time
[2025-07-23 18:06:01] 2025-07-23 16:05:29,077 | INFO     | sum of square deviations: 110960220.0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,077 | INFO     | sum of deviations: -5903972779.0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,077 | INFO     | mean x: 1753284437.0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,077 | INFO     | mean y: 2875731.0422535213
[2025-07-23 18:06:01] 2025-07-23 16:05:29,077 | INFO     | -- intersect: 93291656069.54861
[2025-07-23 18:06:01] 2025-07-23 16:05:29,077 | INFO     | intersect: 93291656069.54861
[2025-07-23 18:06:01] 2025-07-23 16:05:29,078 | INFO     | chi2: 0.03230163030577919
[2025-07-23 18:06:01] 2025-07-23 16:05:29,078 | INFO     | -- intersect: 93291656069.54861
[2025-07-23 18:06:01] 2025-07-23 16:05:29,078 | INFO     | current memory leak: -53.21 B/s (using 71 data points, chi2=0.03)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,078 | INFO     | could have reported an average CPU frequency of 2788 MHz (6 samples)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | ..............................
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . Timing measurements:
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . get job = 0 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . initial setup = 1 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . payload setup = 5 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . stage-in = 0 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . payload execution = 4728 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . stage-out = 0 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | . log creation = 0 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,079 | INFO     | ..............................
[2025-07-23 18:06:01] 2025-07-23 16:05:29,155 | INFO     | 
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | job summary report
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | --------------------------------------------------
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | PanDA job id: 6741825423
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | task id: 45697532
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | errors: (none)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | pilot state: finished 
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | transexitcode: 0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | exeerrorcode: 0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | exeerrordiag: 
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | exitcode: 0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | exitmsg: OK
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | cpuconsumptiontime: 52532 s
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | nevents: 400
[2025-07-23 18:06:01] 2025-07-23 16:05:29,156 | INFO     | neventsw: 0
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | pid: 760497
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | pgrp: 760497
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | corecount: 12
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | event service: False
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | sizes: {0: 2397418, 1: 2397560, 4: 2397822, 11: 2397850, 4737: 2424170, 4738: 2433354, 4742: 2433492}
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | --------------------------------------------------
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | 
[2025-07-23 18:06:01] 2025-07-23 16:05:29,157 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-07-23 18:06:01] 2025-07-23 16:05:29,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,173 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | job 6741825423 has completed (purged errors)
[2025-07-23 18:06:01] 2025-07-23 16:05:29,175 | INFO     | overall cleanup function is called
[2025-07-23 18:06:01] 2025-07-23 16:05:30,184 | INFO     | --- collectZombieJob: --- 10, [760497]
[2025-07-23 18:06:01] 2025-07-23 16:05:30,185 | INFO     | zombie collector waiting for pid 760497
[2025-07-23 18:06:01] 2025-07-23 16:05:30,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 18:06:01] 2025-07-23 16:05:30,185 | INFO     | collected zombie processes
[2025-07-23 18:06:01] 2025-07-23 16:05:30,185 | INFO     | will attempt to kill all subprocesses of pid=760497
[2025-07-23 18:06:01] 2025-07-23 16:05:30,318 | INFO     | process IDs to be killed: [760497] (in reverse order)
[2025-07-23 18:06:01] 2025-07-23 16:05:30,364 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 18:06:01] 2025-07-23 16:05:30,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 18:06:01] 2025-07-23 16:05:30,369 | INFO     | did not find any defunct processes belonging to 760497
[2025-07-23 18:06:01] 2025-07-23 16:05:30,373 | INFO     | did not find any defunct processes belonging to 760497
[2025-07-23 18:06:01] 2025-07-23 16:05:30,373 | INFO     | ready for new job
[2025-07-23 18:06:01] 2025-07-23 16:05:30,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 18:06:01] 2025-07-23 16:05:30,374 | INFO     | ***************************************
[2025-07-23 18:06:01] 2025-07-23 16:05:30,374 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 18:06:01] 2025-07-23 16:05:30,375 | INFO     | ***************************************
[2025-07-23 18:06:01] 2025-07-23 16:05:30,375 | INFO     | 
[2025-07-23 18:06:01] 2025-07-23 16:05:30,376 | INFO     | architecture information:
[2025-07-23 18:06:01] 2025-07-23 16:05:30,376 | INFO     | executing command: cat /etc/os-release
[2025-07-23 18:06:01] 2025-07-23 16:05:30,390 | INFO     | cat /etc/os-release:
[2025-07-23 18:06:01] NAME="CentOS Linux"
[2025-07-23 18:06:01] VERSION="7 (Core)"
[2025-07-23 18:06:01] ID="centos"
[2025-07-23 18:06:01] ID_LIKE="rhel fedora"
[2025-07-23 18:06:01] VERSION_ID="7"
[2025-07-23 18:06:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 18:06:01] ANSI_COLOR="0;31"
[2025-07-23 18:06:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 18:06:01] HOME_URL="https://www.centos.org/"
[2025-07-23 18:06:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 18:06:01] 
[2025-07-23 18:06:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 18:06:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 18:06:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 18:06:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 18:06:01] 
[2025-07-23 18:06:01] 2025-07-23 16:05:30,390 | INFO     | ***************************************
[2025-07-23 18:06:01] 2025-07-23 16:05:30,893 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-07-23 18:06:01] 2025-07-23 16:05:30,906 | INFO     | sufficient remaining disk space (702427430912 B)
[2025-07-23 18:06:01] 2025-07-23 16:05:30,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 18:06:01] 2025-07-23 16:05:30,906 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 18:06:01] 2025-07-23 16:05:30,906 | INFO     | update_server=False
[2025-07-23 18:06:01] 2025-07-23 16:05:30,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 18:06:01] 2025-07-23 16:05:30,907 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 18:06:01] 2025-07-23 16:05:30,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 18:06:01] 2025-07-23 16:05:30,984 | INFO     | all job control threads have been joined
[2025-07-23 18:06:01] 2025-07-23 16:05:31,106 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 18:06:01] 2025-07-23 16:05:31,106 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 18:06:01] 2025-07-23 16:05:31,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 18:06:01] 2025-07-23 16:05:31,106 | INFO     | will abort loop
[2025-07-23 18:06:01] 2025-07-23 16:05:31,399 | INFO     | all data control threads have been joined
[2025-07-23 18:06:01] 2025-07-23 16:05:31,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 18:06:01] 2025-07-23 16:05:31,912 | INFO     | [job] retrieve thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:31,912 | INFO     | [job] queue monitor thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:31,939 | INFO     | [payload] validate_post thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:31,989 | INFO     | [job] control thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,006 | INFO     | all payload control threads have been joined
[2025-07-23 18:06:01] 2025-07-23 16:05:32,038 | INFO     | [data] copytool_in thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,112 | INFO     | [job] job monitor thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,405 | INFO     | [data] control thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,614 | INFO     | [job] validate thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,856 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,865 | INFO     | [payload] failed_post thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,912 | INFO     | [data] copytool_out thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:32,918 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:33,012 | INFO     | [payload] control thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:33,057 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:35,463 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:41,281 | INFO     | job.realtimelogging is not enabled
[2025-07-23 18:06:01] 2025-07-23 16:05:42,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 18:06:01] 2025-07-23 16:05:43,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727769749312)>', '<ExcThread(monitor, started 139727265052416)>']
[2025-07-23 18:06:01] 2025-07-23 16:05:48,974 | INFO     | all workflow threads have been joined
[2025-07-23 18:06:01] 2025-07-23 16:05:48,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 18:06:01] 2025-07-23 16:05:48,975 | INFO     | traces error code: 0
[2025-07-23 18:06:01] 2025-07-23 16:05:48,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 18:06:01] 2025-07-23 16:06:01,380 | INFO     | PID=753750 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 18:06:01] 2025-07-23 16:06:01,381 | INFO     | .. there are 2 such processes running
[2025-07-23 18:06:01] 2025-07-23 16:06:01,381 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 18:06:01] 2025-07-23 16:06:01,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 18:06:01] 2025-07-23 16:06:01,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 18:06:01] 2025-07-23 16:06:01,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 18:06:01] 2025-07-23 16:06:01,381 | INFO     | [monitor] control thread has ended
[2025-07-23 18:06:01] 2025-07-23 16:06:01,492 [wrapper] ==== pilot stdout END ====
[2025-07-23 18:06:01] 2025-07-23 16:06:01,495 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 18:06:01] 2025-07-23 16:06:01,498 [wrapper] pilotpid: 753750
[2025-07-23 18:06:01] 2025-07-23 16:06:01,500 [wrapper] Pilot exit status: 0
[2025-07-23 18:06:01] 2025-07-23 16:06:01,510 [wrapper] pandaids: 6741825423
[2025-07-23 18:06:01] 2025-07-23 16:06:01,543 [wrapper] cleanup supervisor_pilot  830616 753751
[2025-07-23 18:06:01] 2025-07-23 16:06:01,546 [wrapper] Test setup, not cleaning
[2025-07-23 18:06:01] 2025-07-23 16:06:01,549 [wrapper] apfmon messages muted
[2025-07-23 18:06:01] 2025-07-23 16:06:01,551 [wrapper] ==== wrapper stdout END ====
[2025-07-23 18:06:01] 2025-07-23 16:06:01,553 [wrapper] ==== wrapper stderr END ====
[2025-07-23 18:06:01]  *** Error codes and diagnostics ***
[2025-07-23 18:06:01]     "exeErrorCode": 0,
[2025-07-23 18:06:01]     "exeErrorDiag": "",
[2025-07-23 18:06:01]     "pilotErrorCode": 0,
[2025-07-23 18:06:01]     "pilotErrorDiag": "",
[2025-07-23 18:06:01]  *** Listing of results directory ***
[2025-07-23 18:06:01] total 606824
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc    530466 Jul 22 01:55 pilot3.tar.gz
[2025-07-23 18:06:01] -rwx------ 1 boinc boinc     36292 Jul 22 02:06 runpilot2-wrapper.sh
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc      5112 Jul 22 02:06 queuedata.json
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc       100 Jul 23 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 18:06:01] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 16:46 run_atlas
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc       105 Jul 23 16:46 job.xml
[2025-07-23 18:06:01] -rw-r--r-- 2 boinc boinc 329439003 Jul 23 16:46 EVNT.45697530._000152.pool.root.1
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc      6522 Jul 23 16:46 init_data.xml
[2025-07-23 18:06:01] -rw-r--r-- 2 boinc boinc     15095 Jul 23 16:46 start_atlas.sh
[2025-07-23 18:06:01] drwxrwx--x 2 boinc boinc      4096 Jul 23 16:46 shared
[2025-07-23 18:06:01] -rw-r--r-- 2 boinc boinc    542898 Jul 23 16:46 input.tar.gz
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc         0 Jul 23 16:46 boinc_lockfile
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc      2610 Jul 23 16:46 pandaJob.out
[2025-07-23 18:06:01] -rw------- 1 boinc boinc    978487 Jul 23 16:46 agis_schedconf.cvmfs.json
[2025-07-23 18:06:01] -rw------- 1 boinc boinc   1593041 Jul 23 16:46 agis_ddmendpoints.agis.ALL.json
[2025-07-23 18:06:01] drwx------ 4 boinc boinc      4096 Jul 23 16:46 pilot3
[2025-07-23 18:06:01] -rw------- 1 boinc boinc 286414493 Jul 23 18:04 HITS.45697532._003778.pool.root.1
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc       529 Jul 23 18:05 boinc_task_state.xml
[2025-07-23 18:06:01] -rw------- 1 boinc boinc        95 Jul 23 18:05 pilot_heartbeat.json
[2025-07-23 18:06:01] -rw------- 1 boinc boinc      1016 Jul 23 18:05 memory_monitor_summary.json
[2025-07-23 18:06:01] -rw------- 1 boinc boinc    355268 Jul 23 18:05 log.45697532._003778.job.log.tgz.1
[2025-07-23 18:06:01] -rw------- 1 boinc boinc      7769 Jul 23 18:05 heartbeat.json
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc        27 Jul 23 18:06 wrapper_checkpoint.txt
[2025-07-23 18:06:01] -rw------- 1 boinc boinc       821 Jul 23 18:06 pilotlog.txt
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc      8192 Jul 23 18:06 boinc_mmap_file
[2025-07-23 18:06:01] -rw------- 1 boinc boinc    473691 Jul 23 18:06 log.45697532._003778.job.log.1
[2025-07-23 18:06:01] -rw------- 1 boinc boinc       357 Jul 23 18:06 output.list
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc       620 Jul 23 18:06 runtime_log
[2025-07-23 18:06:01] -rw------- 1 boinc boinc    849920 Jul 23 18:06 result.tar.gz
[2025-07-23 18:06:01] -rw------- 1 boinc boinc       664 Jul 23 18:06 Z5KNDmThFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNTHLDmewd2Wn.diag
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc      8721 Jul 23 18:06 runtime_log.err
[2025-07-23 18:06:01] -rw-r--r-- 1 boinc boinc     21625 Jul 23 18:06 stderr.txt
[2025-07-23 18:06:01] HITS file was successfully produced:
[2025-07-23 18:06:01] -rw------- 1 boinc boinc 286414493 Jul 23 18:04 shared/HITS.pool.root.1
[2025-07-23 18:06:01]  *** Contents of shared directory: ***
[2025-07-23 18:06:01] total 602812
[2025-07-23 18:06:01] -rw-r--r-- 2 boinc boinc 329439003 Jul 23 16:46 ATLAS.root_0
[2025-07-23 18:06:01] -rw-r--r-- 2 boinc boinc     15095 Jul 23 16:46 start_atlas.sh
[2025-07-23 18:06:01] -rw-r--r-- 2 boinc boinc    542898 Jul 23 16:46 input.tar.gz
[2025-07-23 18:06:01] -rw------- 1 boinc boinc 286414493 Jul 23 18:04 HITS.pool.root.1
[2025-07-23 18:06:01] -rw------- 1 boinc boinc    849920 Jul 23 18:06 result.tar.gz
18:06:02 (749968): run_atlas exited; CPU time 52588.762368
18:06:02 (749968): called boinc_finish(0)

</stderr_txt>
]]>

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