Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-22 16:57:58 (6476): Detected: vboxwrapper 26206
2025-07-22 16:57:58 (6476): Detected: BOINC client v8.0.2
2025-07-22 16:57:58 (6476): Detected: VirtualBox VboxManage Interface (Version: 7.0.26)
2025-07-22 16:57:58 (6476): Successfully copied 'init_data.xml' to the shared directory.
2025-07-22 16:57:58 (6476): Create VM. (boinc_4be329e7cb43d01e, slot#1)
2025-07-22 16:57:58 (6476): Setting Memory Size for VM. (4300MB)
2025-07-22 16:57:58 (6476): Setting CPU Count for VM. (3)
2025-07-22 16:57:59 (6476): Setting Chipset Options for VM.
2025-07-22 16:57:59 (6476): Setting Graphics Controller Options for VM.
2025-07-22 16:57:59 (6476): Setting Boot Options for VM.
2025-07-22 16:57:59 (6476): Setting Network Configuration for NAT.
2025-07-22 16:57:59 (6476): Enabling VM Network Access.
2025-07-22 16:57:59 (6476): Disabling USB Support for VM.
2025-07-22 16:57:59 (6476): Disabling COM Port Support for VM.
2025-07-22 16:57:59 (6476): Disabling LPT Port Support for VM.
2025-07-22 16:58:00 (6476): Disabling Audio Support for VM.
2025-07-22 16:58:00 (6476): Disabling Clipboard Support for VM.
2025-07-22 16:58:00 (6476): Disabling Drag and Drop Support for VM.
2025-07-22 16:58:00 (6476): Adding storage controller(s) to VM.
2025-07-22 16:58:00 (6476): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-22 16:58:02 (6476): Adding VirtualBox Guest Additions to VM.
2025-07-22 16:58:02 (6476): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-22 16:58:02 (6476): forwarding host port 44933 to guest port 80
2025-07-22 16:58:03 (6476): Enabling remote desktop for VM.
2025-07-22 16:58:03 (6476): Enabling shared directory for VM.
2025-07-22 16:58:03 (6476): Starting VM using VBoxManage interface. (boinc_4be329e7cb43d01e, slot#1)
2025-07-22 16:58:04 (6476): Successfully started VM. (PID = '7074')
2025-07-22 16:58:04 (6476): Reporting VM Process ID to BOINC.
2025-07-22 16:58:04 (6476): Guest Log: BIOS: VirtualBox 7.0.26
2025-07-22 16:58:04 (6476): Guest Log: CPUID EDX: 0x178bfbff
2025-07-22 16:58:04 (6476): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-22 16:58:04 (6476): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-22 16:58:04 (6476): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-22 16:58:04 (6476): Detected: Web Application Enabled (http://localhost:44933)
2025-07-22 16:58:04 (6476): Detected: Remote Desktop Enabled (localhost:35263)
2025-07-22 16:58:04 (6476): Preference change detected
2025-07-22 16:58:04 (6476): Setting CPU throttle for VM. (100%)
2025-07-22 16:58:04 (6476): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-22 16:58:06 (6476): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-22 16:58:06 (6476): Guest Log: BIOS: Booting from Hard Disk...
2025-07-22 16:58:12 (6476): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-22 16:58:12 (6476): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-22 16:58:12 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-22 16:58:21 (6476): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-22 16:58:21 (6476): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-22 16:58:37 (6476): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000170 main     Log opened 2025-07-22T14:58:35.867361000Z
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000273 main     OS Product: Linux
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000307 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000334 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000360 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000361 main     Process ID: 1277
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.000362 main     Package type: LINUX_64BITS_GENERIC
2025-07-22 16:58:37 (6476): Guest Log: 00:00:00.002017 main     5.2.32 r132073 started. Verbose level = 0
2025-07-22 16:58:38 (6476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-22 16:58:38 (6476): Guest Log: [INFO] Mounting shared directory
2025-07-22 16:58:38 (6476): Guest Log: [INFO] Checking for init_data.xml
2025-07-22 16:59:11 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-07-22 16:59:30 (6476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-22 16:59:30 (6476): Guest Log: [INFO] Detected branch: prod
2025-07-22 16:59:30 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-07-22 16:59:33 (6476): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-22 16:59:33 (6476): Guest Log: Copying input files
2025-07-22 16:59:34 (6476): Guest Log: Copied input files into RunAtlas.
2025-07-22 16:59:35 (6476): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-22 16:59:35 (6476): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-22 16:59:35 (6476): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-22 16:59:35 (6476): Guest Log: Further information can be found at the LHC@home message board.
2025-07-22 17:00:59 (6476): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-22 17:01:02 (6476): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-22 17:01:02 (6476): Guest Log: 2.6.3.0 1574 1 29996 148624 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-22 17:01:05 (6476): Guest Log: copied the webapp to /var/www
2025-07-22 17:01:05 (6476): Guest Log: ATHENA_PROC_NUMBER=3
2025-07-22 17:01:05 (6476): Guest Log: ATHENA_CORE_NUMBER=3
2025-07-22 17:01:07 (6476): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-22 17:01:07 (6476): Guest Log:  *** Starting ATLAS job. (PandaID=6741760338 taskID=45697472) ***
2025-07-22 18:37:26 (6476): Status Report: Elapsed Time: '6000.000000'
2025-07-22 18:37:26 (6476): Status Report: CPU Time: '16112.590000'
2025-07-22 20:16:26 (6476): Status Report: Elapsed Time: '12000.000000'
2025-07-22 20:16:26 (6476): Status Report: CPU Time: '33914.520000'
2025-07-22 21:55:26 (6476): Status Report: Elapsed Time: '18000.000000'
2025-07-22 21:55:26 (6476): Status Report: CPU Time: '51719.260000'
2025-07-22 22:08:08 (6476): Guest Log:  *** Job finished ***
2025-07-22 22:08:08 (6476): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:48,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:49,233 | INFO     | [job] queue monitor thread has finished
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:49,703 | INFO     | [data] queue_monitor thread has finished
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:49,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217782576960)>', '<ExcThread(monitor, started 140217033934592)>']
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:50,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:50,476 | INFO     | [monitor] control thread has ended
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:54,841 | INFO     | all workflow threads have been joined
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:54,842 | INFO     | end of generic workflow (traces error code: 0)
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:54,842 | INFO     | traces error code: 0
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:54,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:54,996 [wrapper] ==== pilot stdout END ====
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,005 [wrapper] ==== wrapper stdout RESUME ====
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,014 [wrapper] pilotpid: 5919
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,022 [wrapper] Pilot exit status: 0
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,096 [wrapper] pandaids: 6741760338
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,151 [wrapper] cleanup supervisor_pilot 20011 5920
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,161 [wrapper] Test setup, not cleaning
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,170 [wrapper] apfmon messages muted
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,179 [wrapper] ==== wrapper stdout END ====
2025-07-22 22:08:08 (6476): Guest Log: 2025-07-22 20:07:55,188 [wrapper] ==== wrapper stderr END ====
2025-07-22 22:08:08 (6476): Guest Log:  *** Error codes and diagnostics ***
2025-07-22 22:08:08 (6476): Guest Log:     "exeErrorCode": 0,
2025-07-22 22:08:08 (6476): Guest Log:     "exeErrorDiag": "",
2025-07-22 22:08:08 (6476): Guest Log:     "pilotErrorCode": 0,
2025-07-22 22:08:08 (6476): Guest Log:     "pilotErrorDiag": "",
2025-07-22 22:08:08 (6476): Guest Log:  *** Listing of results directory ***
2025-07-22 22:08:08 (6476): Guest Log: total 283460
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 22 08:14 queuedata.json
2025-07-22 22:08:08 (6476): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 22 08:15 runpilot2-wrapper.sh
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 22 08:15 pilot3.tar.gz
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 22 14:59 start_atlas.sh
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas    542888 Jul 22 14:59 input.tar.gz
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas      6629 Jul 22 14:59 init_data.xml
2025-07-22 22:08:08 (6476): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 22 14:59 EVNT.45697470._000051.pool.root.1 -> /data/./ATLAS.root_0
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas      2610 Jul 22 15:00 pandaJob.out
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas    977712 Jul 22 15:02 agis_schedconf.cvmfs.json
2025-07-22 22:08:08 (6476): Guest Log: drwx------. 4 atlas atlas      4096 Jul 22 15:02 pilot3
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas 282873863 Jul 22 20:05 HITS.45697472._001257.pool.root.1
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas      1029 Jul 22 20:06 memory_monitor_summary.json
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas   1593031 Jul 22 20:06 agis_ddmendpoints.agis.ALL.json
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas    330715 Jul 22 20:06 log.45697472._001257.job.log.tgz.1
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas        95 Jul 22 20:07 pilot_heartbeat.json
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas      7806 Jul 22 20:07 heartbeat.json
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 22 20:07 pilotlog.txt
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas   1457976 Jul 22 20:07 log.45697472._001257.job.log.1
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas       357 Jul 22 20:07 output.list
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 22 20:07 runtime_log
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas   1812480 Jul 22 20:07 result.tar.gz
2025-07-22 22:08:08 (6476): Guest Log: -rw-r--r--. 1 atlas atlas      8591 Jul 22 20:07 runtime_log.err
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas       657 Jul 22 20:07 POhLDmSLNy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmktILDmRMKLMo.diag
2025-07-22 22:08:08 (6476): Guest Log: Looking for outputfile HITS.45697472._001257.pool.root.1
2025-07-22 22:08:08 (6476): Guest Log: HITS file was successfully produced
2025-07-22 22:08:08 (6476): Guest Log: -rw-------. 1 atlas atlas 282873863 Jul 22 20:05 /home/atlas/RunAtlas/HITS.45697472._001257.pool.root.1
2025-07-22 22:08:08 (6476): Guest Log: Successfully finished the ATLAS job!
2025-07-22 22:08:08 (6476): Guest Log: Copying the results back to the shared directory!
2025-07-22 22:08:09 (6476): Guest Log:  *** Contents of shared directory: ***
2025-07-22 22:08:09 (6476): Guest Log: total 322268
2025-07-22 22:08:09 (6476): Guest Log: -rw-r--r--. 1 root root 327613452 Jul 22 14:57 ATLAS.root_0
2025-07-22 22:08:09 (6476): Guest Log: -rw-r--r--. 1 root root      6629 Jul 22 14:57 init_data.xml
2025-07-22 22:08:09 (6476): Guest Log: -rw-r--r--. 1 root root    542888 Jul 22 14:57 input.tar.gz
2025-07-22 22:08:09 (6476): Guest Log: -rw-r--r--. 1 root root   1812480 Jul 22  2025 result.tar.gz
2025-07-22 22:08:09 (6476): Guest Log: -rw-r--r--. 1 root root     15095 Jul 22 14:57 start_atlas.sh
2025-07-22 22:08:09 (6476): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-22 22:08:09 (6476): VM Completion File Detected.
2025-07-22 22:08:09 (6476): Powering off VM.
2025-07-22 22:08:09 (6476): Successfully stopped VM.
2025-07-22 22:08:09 (6476): Deregistering VM. (boinc_4be329e7cb43d01e, slot#1)
2025-07-22 22:08:09 (6476): Removing network bandwidth throttle group from VM.
2025-07-22 22:08:10 (6476): Removing VM from VirtualBox.
22:08:15 (6476): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN