Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:34:43 (12249): wrapper (7.7.26015): starting
10:34:43 (12249): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 10:34:43] Arguments: --nthreads 12
[2025-07-22 10:34:43] Threads: 12
[2025-07-22 10:34:43] Checking for CVMFS
[2025-07-22 10:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 10:34:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 10:34:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 10:34:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 10:34:43] 2.11.2.0 2949 104928 93040 148624 1 59 18762828 20275200 1 130560 0 32151364 99.969 8591293 9833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 10:34:43] CVMFS is ok
[2025-07-22 10:34:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 10:34:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 10:34:43] Further information can be found at the LHC@home message board.
[2025-07-22 10:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 10:34:43] Checking for apptainer binary...
[2025-07-22 10:34:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 10:34:43] Running /usr/bin/apptainer --version
[2025-07-22 10:34:44] apptainer version 1.3.2-1.el7
[2025-07-22 10:34:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 10:34:45] c-205-13.aglt2.org
[2025-07-22 10:34:45] apptainer works
[2025-07-22 10:34:45] Set ATHENA_PROC_NUMBER=12
[2025-07-22 10:34:45] Set ATHENA_CORE_NUMBER=12
[2025-07-22 10:34:45] Starting ATLAS job with PandaID=6741739081
[2025-07-22 10:34:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 12:15:27]  *** The last 200 lines of the pilot log: ***
[2025-07-22 12:15:27]  protocol_id=None
[2025-07-22 12:15:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-22 12:15:27]  replicas=None
[2025-07-22 12:15:27]  scope=mc23_13p6TeV
[2025-07-22 12:15:27]  status=None
[2025-07-22 12:15:27]  status_code=0
[2025-07-22 12:15:27]  storage_token=
[2025-07-22 12:15:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6741739081/log.45697453._004686.job.log.tgz.1
[2025-07-22 12:15:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/38/log.45697453._004686.job.log.tgz.1
[2025-07-22 12:15:27]  workdir=None
[2025-07-22 12:15:27] ]
[2025-07-22 12:15:27] 2025-07-22 16:15:04,547 | INFO     | transferring file log.45697453._004686.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6741739081/log.45697453._004686.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-22 12:15:27] 2025-07-22 16:15:04,547 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6741739081/log.45697453._004686.job.log.tgz.1 /tmp/boinchome/slots/0/log.45697453._004686.job
[2025-07-22 12:15:27] 2025-07-22 16:15:04,567 | INFO     | adding to output.list: log.45697453._004686.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/38/log.45697453._004686.job.log.tg
[2025-07-22 12:15:27] 2025-07-22 16:15:04,568 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-22 12:15:27] 2025-07-22 16:15:04,568 | INFO     | summary of transferred files:
[2025-07-22 12:15:27] 2025-07-22 16:15:04,568 | INFO     |  -- lfn=log.45697453._004686.job.log.tgz.1, status_code=0, status=transferred
[2025-07-22 12:15:27] 2025-07-22 16:15:04,569 | INFO     | stage-out finished correctly
[2025-07-22 12:15:27] 2025-07-22 16:15:05,870 | INFO     | monitor loop #445: job 0:6741739081 is in state 'finished'
[2025-07-22 12:15:27] 2025-07-22 16:15:05,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 12:15:27] 2025-07-22 16:15:07,714 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-22 12:15:27] 2025-07-22 16:15:08,371 | INFO     | monitor loop #446: job 0:6741739081 is in state 'finished'
[2025-07-22 12:15:27] 2025-07-22 16:15:08,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 12:15:27] 2025-07-22 16:15:08,980 | INFO     | job 6741739081 has state=finished
[2025-07-22 12:15:27] 2025-07-22 16:15:08,980 | INFO     | preparing for final server update for job 6741739081 in state='finished'
[2025-07-22 12:15:27] 2025-07-22 16:15:08,981 | INFO     | this job has now completed (state=finished)
[2025-07-22 12:15:27] 2025-07-22 16:15:08,981 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 12:15:27] 2025-07-22 16:15:08,981 | INFO     | log transfer has been attempted: DONE
[2025-07-22 12:15:27] 2025-07-22 16:15:08,981 | INFO     | job 6741739081 has finished - writing final server update
[2025-07-22 12:15:27] 2025-07-22 16:15:08,981 | INFO     | total number of processed events: 400 (read)
[2025-07-22 12:15:27] 2025-07-22 16:15:08,982 | INFO     | executing command: lscpu
[2025-07-22 12:15:27] 2025-07-22 16:15:09,009 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 12:15:27] 2025-07-22 16:15:10,881 | INFO     | monitor loop #447: job 0:6741739081 is in state 'finished'
[2025-07-22 12:15:27] 2025-07-22 16:15:10,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,385 | INFO     | monitor loop #448: job 0:6741739081 is in state 'finished'
[2025-07-22 12:15:27] 2025-07-22 16:15:13,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,648 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-22 12:15:27] 2025-07-22 16:15:13,652 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-07-22 12:15:27] 2025-07-22 16:15:13,654 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741739081/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,655 | INFO     | extracted standard info from prmon json
[2025-07-22 12:15:27] 2025-07-22 16:15:13,655 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:15:27] 2025-07-22 16:15:13,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:15:27] 2025-07-22 16:15:13,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:15:27] 2025-07-22 16:15:13,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:15:27] 2025-07-22 16:15:13,658 | INFO     | fitting pss+swap vs Time
[2025-07-22 12:15:27] 2025-07-22 16:15:13,659 | INFO     | sum of square deviations: 233641590.0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,659 | INFO     | sum of deviations: -13581820311.999998
[2025-07-22 12:15:27] 2025-07-22 16:15:13,659 | INFO     | mean x: 1753197979.0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,659 | INFO     | mean y: 2858739.901098901
[2025-07-22 12:15:27] 2025-07-22 16:15:13,660 | INFO     | -- intersect: 101918018288.93321
[2025-07-22 12:15:27] 2025-07-22 16:15:13,660 | INFO     | intersect: 101918018288.93321
[2025-07-22 12:15:27] 2025-07-22 16:15:13,660 | INFO     | chi2: 0.10914930875672858
[2025-07-22 12:15:27] 2025-07-22 16:15:13,660 | INFO     | -- intersect: 101918018288.93321
[2025-07-22 12:15:27] 2025-07-22 16:15:13,660 | INFO     | current memory leak: -58.13 B/s (using 91 data points, chi2=0.11)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | could have reported an average CPU frequency of 2130 MHz (7 samples)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | ..............................
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . Timing measurements:
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . get job = 0 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . initial setup = 2 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . payload setup = 9 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . stage-in = 0 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . payload execution = 5976 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,661 | INFO     | . stage-out = 0 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,662 | INFO     | . log creation = 0 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,662 | INFO     | ..............................
[2025-07-22 12:15:27] 2025-07-22 16:15:13,744 | INFO     | 
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | job summary report
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | --------------------------------------------------
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | PanDA job id: 6741739081
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | task id: 45697453
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | errors: (none)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | pilot state: finished 
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | transexitcode: 0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,745 | INFO     | exeerrorcode: 0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,746 | INFO     | exeerrordiag: 
[2025-07-22 12:15:27] 2025-07-22 16:15:13,746 | INFO     | exitcode: 0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,746 | INFO     | exitmsg: OK
[2025-07-22 12:15:27] 2025-07-22 16:15:13,746 | INFO     | cpuconsumptiontime: 65687 s
[2025-07-22 12:15:27] 2025-07-22 16:15:13,746 | INFO     | nevents: 400
[2025-07-22 12:15:27] 2025-07-22 16:15:13,746 | INFO     | neventsw: 0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,747 | INFO     | pid: 23104
[2025-07-22 12:15:27] 2025-07-22 16:15:13,747 | INFO     | pgrp: 23104
[2025-07-22 12:15:27] 2025-07-22 16:15:13,747 | INFO     | corecount: 12
[2025-07-22 12:15:27] 2025-07-22 16:15:13,747 | INFO     | event service: False
[2025-07-22 12:15:27] 2025-07-22 16:15:13,747 | INFO     | sizes: {0: 2397325, 1: 2397580, 6: 2397842, 12: 2397870, 5990: 2424607, 5991: 2433605, 5994: 2433789, 6000: 2433983}
[2025-07-22 12:15:27] 2025-07-22 16:15:13,747 | INFO     | --------------------------------------------------
[2025-07-22 12:15:27] 2025-07-22 16:15:13,748 | INFO     | 
[2025-07-22 12:15:27] 2025-07-22 16:15:13,748 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 12:15:27] 2025-07-22 16:15:13,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 12:15:27] 2025-07-22 16:15:13,774 | INFO     | job 6741739081 has completed (purged errors)
[2025-07-22 12:15:27] 2025-07-22 16:15:13,774 | INFO     | overall cleanup function is called
[2025-07-22 12:15:27] 2025-07-22 16:15:14,782 | INFO     | --- collectZombieJob: --- 10, [23104]
[2025-07-22 12:15:27] 2025-07-22 16:15:14,782 | INFO     | zombie collector waiting for pid 23104
[2025-07-22 12:15:27] 2025-07-22 16:15:14,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 12:15:27] 2025-07-22 16:15:14,783 | INFO     | collected zombie processes
[2025-07-22 12:15:27] 2025-07-22 16:15:14,783 | INFO     | will attempt to kill all subprocesses of pid=23104
[2025-07-22 12:15:27] 2025-07-22 16:15:14,875 | INFO     | process IDs to be killed: [23104] (in reverse order)
[2025-07-22 12:15:27] 2025-07-22 16:15:14,927 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 12:15:27] 2025-07-22 16:15:14,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 12:15:27] 2025-07-22 16:15:14,930 | INFO     | did not find any defunct processes belonging to 23104
[2025-07-22 12:15:27] 2025-07-22 16:15:14,933 | INFO     | did not find any defunct processes belonging to 23104
[2025-07-22 12:15:27] 2025-07-22 16:15:14,933 | INFO     | ready for new job
[2025-07-22 12:15:27] 2025-07-22 16:15:14,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 12:15:27] 2025-07-22 16:15:14,934 | INFO     | ***************************************
[2025-07-22 12:15:27] 2025-07-22 16:15:14,934 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 12:15:27] 2025-07-22 16:15:14,934 | INFO     | ***************************************
[2025-07-22 12:15:27] 2025-07-22 16:15:14,934 | INFO     | 
[2025-07-22 12:15:27] 2025-07-22 16:15:14,935 | INFO     | architecture information:
[2025-07-22 12:15:27] 2025-07-22 16:15:14,935 | INFO     | executing command: cat /etc/os-release
[2025-07-22 12:15:27] 2025-07-22 16:15:14,950 | INFO     | cat /etc/os-release:
[2025-07-22 12:15:27] NAME="CentOS Linux"
[2025-07-22 12:15:27] VERSION="7 (Core)"
[2025-07-22 12:15:27] ID="centos"
[2025-07-22 12:15:27] ID_LIKE="rhel fedora"
[2025-07-22 12:15:27] VERSION_ID="7"
[2025-07-22 12:15:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 12:15:27] ANSI_COLOR="0;31"
[2025-07-22 12:15:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 12:15:27] HOME_URL="https://www.centos.org/"
[2025-07-22 12:15:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 12:15:27] 
[2025-07-22 12:15:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 12:15:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 12:15:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 12:15:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 12:15:27] 
[2025-07-22 12:15:27] 2025-07-22 16:15:14,950 | INFO     | ***************************************
[2025-07-22 12:15:27] 2025-07-22 16:15:15,453 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 12:15:27] 2025-07-22 16:15:15,470 | INFO     | sufficient remaining disk space (29116858368 B)
[2025-07-22 12:15:27] 2025-07-22 16:15:15,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 12:15:27] 2025-07-22 16:15:15,470 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 12:15:27] 2025-07-22 16:15:15,470 | INFO     | update_server=False
[2025-07-22 12:15:27] 2025-07-22 16:15:15,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 12:15:27] 2025-07-22 16:15:15,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 12:15:27] 2025-07-22 16:15:15,471 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-22 12:15:27] 2025-07-22 16:15:15,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:15:27] 2025-07-22 16:15:15,472 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 12:15:27] 2025-07-22 16:15:15,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 12:15:27] 2025-07-22 16:15:15,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 12:15:27] 2025-07-22 16:15:15,591 | INFO     | all data control threads have been joined
[2025-07-22 12:15:27] 2025-07-22 16:15:15,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 12:15:27] 2025-07-22 16:15:15,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 12:15:27] 2025-07-22 16:15:15,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:15:27] 2025-07-22 16:15:15,900 | INFO     | will abort loop
[2025-07-22 12:15:27] 2025-07-22 16:15:16,108 | INFO     | all job control threads have been joined
[2025-07-22 12:15:27] 2025-07-22 16:15:16,476 | INFO     | [job] retrieve thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:16,477 | INFO     | [job] queue monitor thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:16,593 | INFO     | [data] control thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:16,711 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:16,770 | INFO     | all payload control threads have been joined
[2025-07-22 12:15:27] 2025-07-22 16:15:16,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:16,905 | INFO     | [job] job monitor thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,113 | INFO     | [job] control thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,150 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,225 | INFO     | [job] validate thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,477 | INFO     | [data] copytool_out thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,552 | INFO     | [payload] validate_post thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,773 | INFO     | [data] copytool_in thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,775 | INFO     | [payload] control thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,812 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:17,827 | INFO     | [payload] failed_post thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:18,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 12:15:27] 2025-07-22 16:15:22,307 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 12:15:27] 2025-07-22 16:15:22,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707366135616)>', '<ExcThread(monitor, started 140706920249088)>']
[2025-07-22 12:15:27] 2025-07-22 16:15:23,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 12:15:27] 2025-07-22 16:15:23,513 | INFO     | [monitor] control thread has ended
[2025-07-22 12:15:27] 2025-07-22 16:15:27,589 | INFO     | all workflow threads have been joined
[2025-07-22 12:15:27] 2025-07-22 16:15:27,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 12:15:27] 2025-07-22 16:15:27,590 | INFO     | traces error code: 0
[2025-07-22 12:15:27] 2025-07-22 16:15:27,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 12:15:27] 2025-07-22 16:15:27,684 [wrapper] ==== pilot stdout END ====
[2025-07-22 12:15:27] 2025-07-22 16:15:27,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 12:15:27] 2025-07-22 16:15:27,692 [wrapper] pilotpid: 15839
[2025-07-22 12:15:27] 2025-07-22 16:15:27,696 [wrapper] Pilot exit status: 0
[2025-07-22 12:15:27] 2025-07-22 16:15:27,710 [wrapper] pandaids: 6741739081
[2025-07-22 12:15:27] 2025-07-22 16:15:27,751 [wrapper] cleanup supervisor_pilot 16524 15840
[2025-07-22 12:15:27] 2025-07-22 16:15:27,754 [wrapper] Test setup, not cleaning
[2025-07-22 12:15:27] 2025-07-22 16:15:27,758 [wrapper] apfmon messages muted
[2025-07-22 12:15:27] 2025-07-22 16:15:27,762 [wrapper] ==== wrapper stdout END ====
[2025-07-22 12:15:27] 2025-07-22 16:15:27,766 [wrapper] ==== wrapper stderr END ====
[2025-07-22 12:15:27]  *** Error codes and diagnostics ***
[2025-07-22 12:15:27]     "exeErrorCode": 0,
[2025-07-22 12:15:27]     "exeErrorDiag": "",
[2025-07-22 12:15:27]     "pilotErrorCode": 0,
[2025-07-22 12:15:27]     "pilotErrorDiag": "",
[2025-07-22 12:15:27]  *** Listing of results directory ***
[2025-07-22 12:15:27] total 572780
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas    530466 Jul 22 00:09 pilot3.tar.gz
[2025-07-22 12:15:27] -rwx------ 1 boincer umatlas     36292 Jul 22 00:14 runpilot2-wrapper.sh
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas      5112 Jul 22 00:14 queuedata.json
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas       100 Jul 22 10:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 12:15:27] -rwxr-xr-x 1 boincer umatlas      7986 Jul 22 10:34 run_atlas
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas       105 Jul 22 10:34 job.xml
[2025-07-22 12:15:27] -rw-r--r-- 2 boincer umatlas 318981542 Jul 22 10:34 EVNT.45697451._000188.pool.root.1
[2025-07-22 12:15:27] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 10:34 start_atlas.sh
[2025-07-22 12:15:27] drwxrwx--x 2 boincer umatlas      4096 Jul 22 10:34 shared
[2025-07-22 12:15:27] -rw-r--r-- 2 boincer umatlas    542903 Jul 22 10:34 input.tar.gz
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas         0 Jul 22 10:34 boinc_lockfile
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas      2634 Jul 22 10:34 pandaJob.out
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas    977712 Jul 22 10:34 agis_schedconf.cvmfs.json
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas   1593031 Jul 22 10:34 agis_ddmendpoints.agis.ALL.json
[2025-07-22 12:15:27] drwx------ 4 boincer umatlas      4096 Jul 22 10:34 pilot3
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas      5867 Jul 22 12:09 init_data.xml
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas        95 Jul 22 12:14 pilot_heartbeat.json
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas 261800347 Jul 22 12:14 HITS.45697453._004686.pool.root.1
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas       529 Jul 22 12:14 boinc_task_state.xml
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas      1050 Jul 22 12:15 memory_monitor_summary.json
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas    374223 Jul 22 12:15 log.45697453._004686.job.log.tgz.1
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas      7850 Jul 22 12:15 heartbeat.json
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas      8192 Jul 22 12:15 boinc_mmap_file
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas        27 Jul 22 12:15 wrapper_checkpoint.txt
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas      4666 Jul 22 12:15 pilotlog.txt
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas    560556 Jul 22 12:15 log.45697453._004686.job.log.1
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas       357 Jul 22 12:15 output.list
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas       620 Jul 22 12:15 runtime_log
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas    952320 Jul 22 12:15 result.tar.gz
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas      8662 Jul 22 12:15 runtime_log.err
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas       659 Jul 22 12:15 a1MNDmQZJy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQMILDmuvdeAo.diag
[2025-07-22 12:15:27] -rw-r--r-- 1 boincer umatlas     21764 Jul 22 12:15 stderr.txt
[2025-07-22 12:15:27] HITS file was successfully produced:
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas 261800347 Jul 22 12:14 shared/HITS.pool.root.1
[2025-07-22 12:15:27]  *** Contents of shared directory: ***
[2025-07-22 12:15:27] total 568660
[2025-07-22 12:15:27] -rw-r--r-- 2 boincer umatlas 318981542 Jul 22 10:34 ATLAS.root_0
[2025-07-22 12:15:27] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 10:34 start_atlas.sh
[2025-07-22 12:15:27] -rw-r--r-- 2 boincer umatlas    542903 Jul 22 10:34 input.tar.gz
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas 261800347 Jul 22 12:14 HITS.pool.root.1
[2025-07-22 12:15:27] -rw------- 1 boincer umatlas    952320 Jul 22 12:15 result.tar.gz
12:15:29 (12249): run_atlas exited; CPU time 65658.048055
12:15:29 (12249): called boinc_finish(0)

</stderr_txt>
]]>

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