Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:22:28 (1118687): wrapper (7.7.26015): starting
23:22:28 (1118687): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 23:22:28] Arguments: --nthreads 12
[2025-07-22 23:22:28] Threads: 12
[2025-07-22 23:22:28] Checking for CVMFS
[2025-07-22 23:22:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 23:22:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 23:22:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 23:22:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 23:22:29] 2.13.1.0 659355 1460 68116 148635 2 57 2682416 4097024 0 130560 0 1153888 99.987 56236 7077 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-22 23:22:29] CVMFS is ok
[2025-07-22 23:22:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 23:22:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 23:22:29] Further information can be found at the LHC@home message board.
[2025-07-22 23:22:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 23:22:29] Checking for apptainer binary...
[2025-07-22 23:22:29] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-22 23:22:29] apptainer is not installed, using version from CVMFS
[2025-07-22 23:22:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 23:22:29] pckelar8.cern.ch
[2025-07-22 23:22:29] apptainer works
[2025-07-22 23:22:29] Set ATHENA_PROC_NUMBER=12
[2025-07-22 23:22:29] Set ATHENA_CORE_NUMBER=12
[2025-07-22 23:22:29] Starting ATLAS job with PandaID=6741741754
[2025-07-22 23:22:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 00:56:44]  *** The last 200 lines of the pilot log: ***
[2025-07-23 00:56:44]  lfn=log.45697453._005492.job.log.tgz.1
[2025-07-23 00:56:44]  mtime=0
[2025-07-23 00:56:44]  protocol_id=None
[2025-07-23 00:56:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 00:56:44]  replicas=None
[2025-07-23 00:56:44]  scope=mc23_13p6TeV
[2025-07-23 00:56:44]  status=None
[2025-07-23 00:56:44]  status_code=0
[2025-07-23 00:56:44]  storage_token=
[2025-07-23 00:56:44]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6741741754/log.45697453._005492.job.log.tgz.1
[2025-07-23 00:56:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/f6/log.45697453._005492.job.log.tgz.1
[2025-07-23 00:56:44]  workdir=None
[2025-07-23 00:56:44] ]
[2025-07-23 00:56:44] 2025-07-22 22:56:05,000 | INFO     | transferring file log.45697453._005492.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6741741754/log.45697453._005492.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-23 00:56:44] 2025-07-22 22:56:05,000 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6741741754/log.45697453._005492.job.log.tgz.1 /var/lib/boinc/slots/0/log.45697453._005492.job
[2025-07-23 00:56:44] 2025-07-22 22:56:05,013 | INFO     | adding to output.list: log.45697453._005492.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/f6/log.45697453._005492.job.log.tg
[2025-07-23 00:56:44] 2025-07-22 22:56:05,014 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 00:56:44] 2025-07-22 22:56:05,014 | INFO     | summary of transferred files:
[2025-07-23 00:56:44] 2025-07-22 22:56:05,014 | INFO     |  -- lfn=log.45697453._005492.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 00:56:44] 2025-07-22 22:56:05,015 | INFO     | stage-out finished correctly
[2025-07-23 00:56:44] 2025-07-22 22:56:05,142 | WARNING  | process 1129465 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 00:56:44] 2025-07-22 22:56:05,142 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6741741754/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 00:56:44] 2025-07-22 22:56:05,208 | INFO     | number of running child processes to parent process 1129465: 1
[2025-07-23 00:56:44] 2025-07-22 22:56:05,208 | INFO     | maximum number of monitored processes: 6
[2025-07-23 00:56:44] 2025-07-22 22:56:07,711 | INFO     | monitor loop #426: job 0:6741741754 is in state 'finished'
[2025-07-23 00:56:44] 2025-07-22 22:56:07,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 00:56:44] 2025-07-22 22:56:08,338 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 00:56:44] 2025-07-22 22:56:09,717 | INFO     | job 6741741754 has state=finished
[2025-07-23 00:56:44] 2025-07-22 22:56:09,717 | INFO     | preparing for final server update for job 6741741754 in state='finished'
[2025-07-23 00:56:44] 2025-07-22 22:56:09,717 | INFO     | this job has now completed (state=finished)
[2025-07-23 00:56:44] 2025-07-22 22:56:09,717 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 00:56:44] 2025-07-22 22:56:09,717 | INFO     | log transfer has been attempted: DONE
[2025-07-23 00:56:44] 2025-07-22 22:56:09,717 | INFO     | job 6741741754 has finished - writing final server update
[2025-07-23 00:56:44] 2025-07-22 22:56:09,718 | INFO     | total number of processed events: 400 (read)
[2025-07-23 00:56:44] 2025-07-22 22:56:09,719 | INFO     | executing command: lscpu
[2025-07-23 00:56:44] 2025-07-22 22:56:09,739 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 00:56:44] 2025-07-22 22:56:10,214 | INFO     | monitor loop #427: job 0:6741741754 is in state 'finished'
[2025-07-23 00:56:44] 2025-07-22 22:56:10,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,415 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-23 00:56:44] 2025-07-22 22:56:12,416 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2155.17025
[2025-07-23 00:56:44] 2025-07-22 22:56:12,418 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6741741754/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,419 | INFO     | extracted standard info from prmon json
[2025-07-23 00:56:44] 2025-07-22 22:56:12,419 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 00:56:44] 2025-07-22 22:56:12,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 00:56:44] 2025-07-22 22:56:12,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 00:56:44] 2025-07-22 22:56:12,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 00:56:44] 2025-07-22 22:56:12,421 | INFO     | fitting pss+swap vs Time
[2025-07-23 00:56:44] 2025-07-22 22:56:12,421 | INFO     | sum of square deviations: 190403570.0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,421 | INFO     | sum of deviations: -20973182870.0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,421 | INFO     | mean x: 1753222246.0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,421 | INFO     | mean y: 3025345.9176470586
[2025-07-23 00:56:44] 2025-07-22 22:56:12,422 | INFO     | -- intersect: 193122570200.61823
[2025-07-23 00:56:44] 2025-07-22 22:56:12,422 | INFO     | intersect: 193122570200.61823
[2025-07-23 00:56:44] 2025-07-22 22:56:12,422 | INFO     | chi2: 0.11955865822140281
[2025-07-23 00:56:44] 2025-07-22 22:56:12,422 | INFO     | -- intersect: 193122570200.61823
[2025-07-23 00:56:44] 2025-07-22 22:56:12,422 | INFO     | current memory leak: -110.15 B/s (using 85 data points, chi2=0.12)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,422 | INFO     | could have reported an average CPU frequency of 2569 MHz (7 samples)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | ..............................
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . Timing measurements:
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . get job = 0 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . initial setup = 1 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . payload setup = 5 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . stage-in = 0 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . payload execution = 5584 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . stage-out = 0 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | . log creation = 0 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,423 | INFO     | ..............................
[2025-07-23 00:56:44] 2025-07-22 22:56:12,676 | INFO     | 
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | job summary report
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | --------------------------------------------------
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | PanDA job id: 6741741754
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | task id: 45697453
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | errors: (none)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | pilot state: finished 
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | transexitcode: 0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | exeerrorcode: 0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | exeerrordiag: 
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | exitcode: 0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,677 | INFO     | exitmsg: OK
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | cpuconsumptiontime: 62469 s
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | nevents: 400
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | neventsw: 0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | pid: 1129465
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | pgrp: 1129465
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | corecount: 12
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | event service: False
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | sizes: {0: 2397552, 3: 2397814, 11: 2397842, 5593: 2424569, 5595: 2433567, 5598: 2433623, 5602: 2433945}
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | --------------------------------------------------
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | 
[2025-07-23 00:56:44] 2025-07-22 22:56:12,678 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 00:56:44] 2025-07-22 22:56:12,699 | INFO     | job 6741741754 has completed (purged errors)
[2025-07-23 00:56:44] 2025-07-22 22:56:12,699 | INFO     | overall cleanup function is called
[2025-07-23 00:56:44] 2025-07-22 22:56:13,706 | INFO     | --- collectZombieJob: --- 10, [1129465]
[2025-07-23 00:56:44] 2025-07-22 22:56:13,706 | INFO     | zombie collector waiting for pid 1129465
[2025-07-23 00:56:44] 2025-07-22 22:56:13,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 00:56:44] 2025-07-22 22:56:13,707 | INFO     | collected zombie processes
[2025-07-23 00:56:44] 2025-07-22 22:56:13,707 | INFO     | will attempt to kill all subprocesses of pid=1129465
[2025-07-23 00:56:44] 2025-07-22 22:56:13,773 | INFO     | process IDs to be killed: [1129465] (in reverse order)
[2025-07-23 00:56:44] 2025-07-22 22:56:13,807 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 00:56:44] 2025-07-22 22:56:13,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 00:56:44] 2025-07-22 22:56:13,809 | INFO     | did not find any defunct processes belonging to 1129465
[2025-07-23 00:56:44] 2025-07-22 22:56:13,811 | INFO     | did not find any defunct processes belonging to 1129465
[2025-07-23 00:56:44] 2025-07-22 22:56:13,811 | INFO     | ready for new job
[2025-07-23 00:56:44] 2025-07-22 22:56:13,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 00:56:44] 2025-07-22 22:56:13,812 | INFO     | ***************************************
[2025-07-23 00:56:44] 2025-07-22 22:56:13,813 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 00:56:44] 2025-07-22 22:56:13,813 | INFO     | ***************************************
[2025-07-23 00:56:44] 2025-07-22 22:56:13,813 | INFO     | 
[2025-07-23 00:56:44] 2025-07-22 22:56:13,813 | INFO     | architecture information:
[2025-07-23 00:56:44] 2025-07-22 22:56:13,813 | INFO     | executing command: cat /etc/os-release
[2025-07-23 00:56:44] 2025-07-22 22:56:13,825 | INFO     | cat /etc/os-release:
[2025-07-23 00:56:44] NAME="CentOS Linux"
[2025-07-23 00:56:44] VERSION="7 (Core)"
[2025-07-23 00:56:44] ID="centos"
[2025-07-23 00:56:44] ID_LIKE="rhel fedora"
[2025-07-23 00:56:44] VERSION_ID="7"
[2025-07-23 00:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 00:56:44] ANSI_COLOR="0;31"
[2025-07-23 00:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 00:56:44] HOME_URL="https://www.centos.org/"
[2025-07-23 00:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 00:56:44] 
[2025-07-23 00:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 00:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 00:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 00:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 00:56:44] 
[2025-07-23 00:56:44] 2025-07-22 22:56:13,825 | INFO     | ***************************************
[2025-07-23 00:56:44] 2025-07-22 22:56:14,328 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-23 00:56:44] 2025-07-22 22:56:14,341 | INFO     | sufficient remaining disk space (1716731772928 B)
[2025-07-23 00:56:44] 2025-07-22 22:56:14,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 00:56:44] 2025-07-22 22:56:14,341 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 00:56:44] 2025-07-22 22:56:14,341 | INFO     | update_server=False
[2025-07-23 00:56:44] 2025-07-22 22:56:14,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 00:56:44] 2025-07-22 22:56:14,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 00:56:44] 2025-07-22 22:56:14,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 00:56:44] 2025-07-22 22:56:14,342 | INFO     | aborting loop
[2025-07-23 00:56:44] 2025-07-22 22:56:14,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 00:56:44] 2025-07-22 22:56:14,695 | INFO     | all job control threads have been joined
[2025-07-23 00:56:44] 2025-07-22 22:56:14,891 | INFO     | all data control threads have been joined
[2025-07-23 00:56:44] 2025-07-22 22:56:15,112 | INFO     | all payload control threads have been joined
[2025-07-23 00:56:44] 2025-07-22 22:56:15,347 | INFO     | [job] retrieve thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,347 | INFO     | [job] queue monitor thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,348 | INFO     | [job] job monitor thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,437 | INFO     | [payload] failed_post thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,454 | INFO     | [data] copytool_in thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 00:56:44] 2025-07-22 22:56:15,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,640 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,701 | INFO     | [job] control thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:15,896 | INFO     | [data] control thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:16,010 | INFO     | [payload] validate_post thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:16,118 | INFO     | [payload] control thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:16,692 | INFO     | [job] validate thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:16,692 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:16,797 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:17,603 | INFO     | [data] copytool_out thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:18,416 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 00:56:44] 2025-07-22 22:56:19,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086277826368)>', '<ExcThread(monitor, started 140085391521536)>']
[2025-07-23 00:56:44] 2025-07-22 22:56:24,356 | INFO     | all workflow threads have been joined
[2025-07-23 00:56:44] 2025-07-22 22:56:24,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 00:56:44] 2025-07-22 22:56:24,356 | INFO     | traces error code: 0
[2025-07-23 00:56:44] 2025-07-22 22:56:24,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 00:56:44] 2025-07-22 22:56:44,560 | INFO     | PID=1122355 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 00:56:44] 2025-07-22 22:56:44,560 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 00:56:44] 2025-07-22 22:56:44,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 00:56:44] 2025-07-22 22:56:44,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 00:56:44] 2025-07-22 22:56:44,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 00:56:44] 2025-07-22 22:56:44,561 | INFO     | [monitor] control thread has ended
[2025-07-23 00:56:44] 2025-07-22 22:56:44,647 [wrapper] ==== pilot stdout END ====
[2025-07-23 00:56:44] 2025-07-22 22:56:44,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 00:56:44] 2025-07-22 22:56:44,652 [wrapper] pilotpid: 1122355
[2025-07-23 00:56:44] 2025-07-22 22:56:44,655 [wrapper] Pilot exit status: 0
[2025-07-23 00:56:44] 2025-07-22 22:56:44,662 [wrapper] pandaids: 6741741754
[2025-07-23 00:56:44] 2025-07-22 22:56:44,680 [wrapper] cleanup supervisor_pilot 1145349 1122356
[2025-07-23 00:56:44] 2025-07-22 22:56:44,682 [wrapper] Test setup, not cleaning
[2025-07-23 00:56:44] 2025-07-22 22:56:44,684 [wrapper] apfmon messages muted
[2025-07-23 00:56:44] 2025-07-22 22:56:44,686 [wrapper] ==== wrapper stdout END ====
[2025-07-23 00:56:44] 2025-07-22 22:56:44,688 [wrapper] ==== wrapper stderr END ====
[2025-07-23 00:56:44]  *** Error codes and diagnostics ***
[2025-07-23 00:56:44]     "exeErrorCode": 0,
[2025-07-23 00:56:44]     "exeErrorDiag": "",
[2025-07-23 00:56:44]     "pilotErrorCode": 0,
[2025-07-23 00:56:44]     "pilotErrorDiag": "",
[2025-07-23 00:56:44]  *** Listing of results directory ***
[2025-07-23 00:56:44] total 569328
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc    530466 Jul 22 06:54 pilot3.tar.gz
[2025-07-23 00:56:44] -rwx------ 1 boinc boinc     36292 Jul 22 07:07 runpilot2-wrapper.sh
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc      5112 Jul 22 07:07 queuedata.json
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc       100 Jul 22 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 00:56:44] -rwxr-xr-x 1 boinc boinc      7986 Jul 22 23:22 run_atlas
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc       105 Jul 22 23:22 job.xml
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc      6251 Jul 22 23:22 init_data.xml
[2025-07-23 00:56:44] -rw-r--r-- 2 boinc boinc 319511183 Jul 22 23:22 EVNT.45697451._000220.pool.root.1
[2025-07-23 00:56:44] -rw-r--r-- 2 boinc boinc     15095 Jul 22 23:22 start_atlas.sh
[2025-07-23 00:56:44] drwxrwx--x 2 boinc boinc      4096 Jul 22 23:22 shared
[2025-07-23 00:56:44] -rw-r--r-- 2 boinc boinc    542899 Jul 22 23:22 input.tar.gz
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc         0 Jul 22 23:22 boinc_lockfile
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc      2634 Jul 22 23:22 pandaJob.out
[2025-07-23 00:56:44] -rw------- 1 boinc boinc    977736 Jul 22 23:22 agis_schedconf.cvmfs.json
[2025-07-23 00:56:44] -rw------- 1 boinc boinc   1593031 Jul 22 23:22 agis_ddmendpoints.agis.ALL.json
[2025-07-23 00:56:44] drwx------ 4 boinc boinc      4096 Jul 22 23:22 pilot3
[2025-07-23 00:56:44] -rw------- 1 boinc boinc 257768817 Jul 23 00:55 HITS.45697453._005492.pool.root.1
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc       529 Jul 23 00:55 boinc_task_state.xml
[2025-07-23 00:56:44] -rw------- 1 boinc boinc      1031 Jul 23 00:56 memory_monitor_summary.json
[2025-07-23 00:56:44] -rw------- 1 boinc boinc    379988 Jul 23 00:56 log.45697453._005492.job.log.tgz.1
[2025-07-23 00:56:44] -rw------- 1 boinc boinc      7789 Jul 23 00:56 heartbeat.json
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc      8192 Jul 23 00:56 boinc_mmap_file
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc        27 Jul 23 00:56 wrapper_checkpoint.txt
[2025-07-23 00:56:44] -rw------- 1 boinc boinc        95 Jul 23 00:56 pilot_heartbeat.json
[2025-07-23 00:56:44] -rw------- 1 boinc boinc       747 Jul 23 00:56 pilotlog.txt
[2025-07-23 00:56:44] -rw------- 1 boinc boinc    538048 Jul 23 00:56 log.45697453._005492.job.log.1
[2025-07-23 00:56:44] -rw------- 1 boinc boinc       357 Jul 23 00:56 output.list
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc       620 Jul 23 00:56 runtime_log
[2025-07-23 00:56:44] -rw------- 1 boinc boinc    942080 Jul 23 00:56 result.tar.gz
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc      8684 Jul 23 00:56 runtime_log.err
[2025-07-23 00:56:44] -rw------- 1 boinc boinc       656 Jul 23 00:56 8EONDmTPKy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaVuKDmidHW0n.diag
[2025-07-23 00:56:44] -rw-r--r-- 1 boinc boinc     21812 Jul 23 00:56 stderr.txt
[2025-07-23 00:56:44] HITS file was successfully produced:
[2025-07-23 00:56:44] -rw------- 1 boinc boinc 257768817 Jul 23 00:55 shared/HITS.pool.root.1
[2025-07-23 00:56:44]  *** Contents of shared directory: ***
[2025-07-23 00:56:44] total 565228
[2025-07-23 00:56:44] -rw-r--r-- 2 boinc boinc 319511183 Jul 22 23:22 ATLAS.root_0
[2025-07-23 00:56:44] -rw-r--r-- 2 boinc boinc     15095 Jul 22 23:22 start_atlas.sh
[2025-07-23 00:56:44] -rw-r--r-- 2 boinc boinc    542899 Jul 22 23:22 input.tar.gz
[2025-07-23 00:56:44] -rw------- 1 boinc boinc 257768817 Jul 23 00:55 HITS.pool.root.1
[2025-07-23 00:56:44] -rw------- 1 boinc boinc    942080 Jul 23 00:56 result.tar.gz
00:56:46 (1118687): run_atlas exited; CPU time 62500.954592
00:56:46 (1118687): called boinc_finish(0)

</stderr_txt>
]]>

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