Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:21:46 (1119436): wrapper (7.7.26015): starting
10:21:46 (1119436): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 10:21:46] Arguments: --nthreads 8
[2025-07-22 10:21:46] Threads: 8
[2025-07-22 10:21:46] Checking for CVMFS
[2025-07-22 10:21:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 10:21:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 10:21:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 10:21:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 10:21:47] 2.13.1.0 3153527 1285 81040 148624 3 180 40642510 40960001 13740 16776704 0 15843239 99.999 46891 52627 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 10:21:47] CVMFS is ok
[2025-07-22 10:21:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 10:21:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 10:21:47] Further information can be found at the LHC@home message board.
[2025-07-22 10:21:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 10:21:47] Checking for apptainer binary...
[2025-07-22 10:21:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 10:21:47] Running /usr/bin/apptainer --version
[2025-07-22 10:21:47] apptainer version 1.4.1-1.el9
[2025-07-22 10:21:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 10:21:47] c-208-37.aglt2.org
[2025-07-22 10:21:47] apptainer works
[2025-07-22 10:21:47] Set ATHENA_PROC_NUMBER=8
[2025-07-22 10:21:47] Set ATHENA_CORE_NUMBER=8
[2025-07-22 10:21:47] Starting ATLAS job with PandaID=6741741758
[2025-07-22 10:21:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 11:32:02]  *** The last 200 lines of the pilot log: ***
[2025-07-22 11:32:02]  lfn=log.45697453._005496.job.log.tgz.1
[2025-07-22 11:32:02]  mtime=0
[2025-07-22 11:32:02]  protocol_id=None
[2025-07-22 11:32:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-22 11:32:02]  replicas=None
[2025-07-22 11:32:02]  scope=mc23_13p6TeV
[2025-07-22 11:32:02]  status=None
[2025-07-22 11:32:02]  status_code=0
[2025-07-22 11:32:02]  storage_token=
[2025-07-22 11:32:02]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6741741758/log.45697453._005496.job.log.tgz.1
[2025-07-22 11:32:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/91/log.45697453._005496.job.log.tgz.1
[2025-07-22 11:32:02]  workdir=None
[2025-07-22 11:32:02] ]
[2025-07-22 11:32:02] 2025-07-22 15:31:25,290 | INFO     | transferring file log.45697453._005496.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6741741758/log.45697453._005496.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-22 11:32:02] 2025-07-22 15:31:25,290 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6741741758/log.45697453._005496.job.log.tgz.1 /tmp/boinchome/slots/8/log.45697453._005496.job
[2025-07-22 11:32:02] 2025-07-22 15:31:25,311 | INFO     | adding to output.list: log.45697453._005496.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/91/log.45697453._005496.job.log.tg
[2025-07-22 11:32:02] 2025-07-22 15:31:25,312 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-22 11:32:02] 2025-07-22 15:31:25,312 | INFO     | summary of transferred files:
[2025-07-22 11:32:02] 2025-07-22 15:31:25,312 | INFO     |  -- lfn=log.45697453._005496.job.log.tgz.1, status_code=0, status=transferred
[2025-07-22 11:32:02] 2025-07-22 15:31:25,312 | INFO     | stage-out finished correctly
[2025-07-22 11:32:02] 2025-07-22 15:31:25,534 | INFO     | number of running child processes to parent process 1129493: 1
[2025-07-22 11:32:02] 2025-07-22 15:31:25,534 | INFO     | maximum number of monitored processes: 6
[2025-07-22 11:32:02] 2025-07-22 15:31:26,287 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-22 11:32:02] 2025-07-22 15:31:26,800 | INFO     | job 6741741758 has state=finished
[2025-07-22 11:32:02] 2025-07-22 15:31:26,800 | INFO     | preparing for final server update for job 6741741758 in state='finished'
[2025-07-22 11:32:02] 2025-07-22 15:31:26,800 | INFO     | this job has now completed (state=finished)
[2025-07-22 11:32:02] 2025-07-22 15:31:26,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 11:32:02] 2025-07-22 15:31:26,800 | INFO     | log transfer has been attempted: DONE
[2025-07-22 11:32:02] 2025-07-22 15:31:26,800 | INFO     | job 6741741758 has finished - writing final server update
[2025-07-22 11:32:02] 2025-07-22 15:31:26,801 | INFO     | total number of processed events: 400 (read)
[2025-07-22 11:32:02] 2025-07-22 15:31:26,801 | INFO     | executing command: lscpu
[2025-07-22 11:32:02] 2025-07-22 15:31:26,856 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 11:32:02] 2025-07-22 15:31:28,037 | INFO     | monitor loop #301: job 0:6741741758 is in state 'finished'
[2025-07-22 11:32:02] 2025-07-22 15:31:28,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,446 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-22 11:32:02] 2025-07-22 15:31:30,451 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3782.7011328125
[2025-07-22 11:32:02] 2025-07-22 15:31:30,463 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6741741758/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,464 | INFO     | extracted standard info from prmon json
[2025-07-22 11:32:02] 2025-07-22 15:31:30,464 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 11:32:02] 2025-07-22 15:31:30,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 11:32:02] 2025-07-22 15:31:30,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 11:32:02] 2025-07-22 15:31:30,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 11:32:02] 2025-07-22 15:31:30,465 | INFO     | fitting pss+swap vs Time
[2025-07-22 11:32:02] 2025-07-22 15:31:30,465 | INFO     | sum of square deviations: 70364110.0
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | sum of deviations: -628815205.9999999
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | mean x: 1753196276.0
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | mean y: 2586114.819672131
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | -- intersect: 15670182527.982187
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | intersect: 15670182527.982187
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | chi2: 0.0003330146844822799
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | -- intersect: 15670182527.982187
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | current memory leak: -8.94 B/s (using 61 data points, chi2=0.00)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | could have reported an average CPU frequency of 3786 MHz (6 samples)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | ..............................
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | . Timing measurements:
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | . get job = 0 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | . initial setup = 2 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | . payload setup = 5 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,466 | INFO     | . stage-in = 0 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,467 | INFO     | . payload execution = 4144 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,467 | INFO     | . stage-out = 0 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,467 | INFO     | . log creation = 0 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,467 | INFO     | ..............................
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | 
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | job summary report
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | --------------------------------------------------
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | PanDA job id: 6741741758
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | task id: 45697453
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | errors: (none)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | pilot state: finished 
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | transexitcode: 0
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | exeerrorcode: 0
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | exeerrordiag: 
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | exitcode: 0
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | exitmsg: OK
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | cpuconsumptiontime: 31239 s
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | nevents: 400
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | neventsw: 0
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | pid: 1129493
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | pgrp: 1129493
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | corecount: 8
[2025-07-22 11:32:02] 2025-07-22 15:31:30,528 | INFO     | event service: False
[2025-07-22 11:32:02] 2025-07-22 15:31:30,529 | INFO     | sizes: {0: 2397381, 1: 2397580, 5: 2397842, 11: 2397898, 4153: 2423889, 4154: 2432915, 4155: 2433099, 4160: 2433293}
[2025-07-22 11:32:02] 2025-07-22 15:31:30,529 | INFO     | --------------------------------------------------
[2025-07-22 11:32:02] 2025-07-22 15:31:30,529 | INFO     | 
[2025-07-22 11:32:02] 2025-07-22 15:31:30,529 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-22 11:32:02] 2025-07-22 15:31:30,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | job 6741741758 has completed (purged errors)
[2025-07-22 11:32:02] 2025-07-22 15:31:30,549 | INFO     | overall cleanup function is called
[2025-07-22 11:32:02] 2025-07-22 15:31:31,557 | INFO     | --- collectZombieJob: --- 10, [1129493]
[2025-07-22 11:32:02] 2025-07-22 15:31:31,557 | INFO     | zombie collector waiting for pid 1129493
[2025-07-22 11:32:02] 2025-07-22 15:31:31,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 11:32:02] 2025-07-22 15:31:31,557 | INFO     | collected zombie processes
[2025-07-22 11:32:02] 2025-07-22 15:31:31,557 | INFO     | will attempt to kill all subprocesses of pid=1129493
[2025-07-22 11:32:02] 2025-07-22 15:31:31,913 | INFO     | process IDs to be killed: [1129493] (in reverse order)
[2025-07-22 11:32:02] 2025-07-22 15:31:32,029 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 11:32:02] 2025-07-22 15:31:32,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 11:32:02] 2025-07-22 15:31:32,044 | INFO     | did not find any defunct processes belonging to 1129493
[2025-07-22 11:32:02] 2025-07-22 15:31:32,055 | INFO     | did not find any defunct processes belonging to 1129493
[2025-07-22 11:32:02] 2025-07-22 15:31:32,056 | INFO     | ready for new job
[2025-07-22 11:32:02] 2025-07-22 15:31:32,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 11:32:02] 2025-07-22 15:31:32,057 | INFO     | ***************************************
[2025-07-22 11:32:02] 2025-07-22 15:31:32,057 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 11:32:02] 2025-07-22 15:31:32,057 | INFO     | ***************************************
[2025-07-22 11:32:02] 2025-07-22 15:31:32,057 | INFO     | 
[2025-07-22 11:32:02] 2025-07-22 15:31:32,062 | INFO     | architecture information:
[2025-07-22 11:32:02] 2025-07-22 15:31:32,062 | INFO     | executing command: cat /etc/os-release
[2025-07-22 11:32:02] 2025-07-22 15:31:32,073 | INFO     | cat /etc/os-release:
[2025-07-22 11:32:02] NAME="CentOS Linux"
[2025-07-22 11:32:02] VERSION="7 (Core)"
[2025-07-22 11:32:02] ID="centos"
[2025-07-22 11:32:02] ID_LIKE="rhel fedora"
[2025-07-22 11:32:02] VERSION_ID="7"
[2025-07-22 11:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 11:32:02] ANSI_COLOR="0;31"
[2025-07-22 11:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 11:32:02] HOME_URL="https://www.centos.org/"
[2025-07-22 11:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 11:32:02] 
[2025-07-22 11:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 11:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 11:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 11:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 11:32:02] 
[2025-07-22 11:32:02] 2025-07-22 15:31:32,073 | INFO     | ***************************************
[2025-07-22 11:32:02] 2025-07-22 15:31:32,577 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-22 11:32:02] 2025-07-22 15:31:32,595 | INFO     | sufficient remaining disk space (160161595392 B)
[2025-07-22 11:32:02] 2025-07-22 15:31:32,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 11:32:02] 2025-07-22 15:31:32,596 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 11:32:02] 2025-07-22 15:31:32,596 | INFO     | update_server=False
[2025-07-22 11:32:02] 2025-07-22 15:31:32,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 11:32:02] 2025-07-22 15:31:32,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 11:32:02] 2025-07-22 15:31:33,044 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 11:32:02] 2025-07-22 15:31:33,044 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 11:32:02] 2025-07-22 15:31:33,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:32:02] 2025-07-22 15:31:33,045 | INFO     | will abort loop
[2025-07-22 11:32:02] 2025-07-22 15:31:33,126 | INFO     | all payload control threads have been joined
[2025-07-22 11:32:02] 2025-07-22 15:31:33,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 11:32:02] 2025-07-22 15:31:33,428 | INFO     | all job control threads have been joined
[2025-07-22 11:32:02] 2025-07-22 15:31:33,601 | INFO     | [job] retrieve thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:33,643 | INFO     | all data control threads have been joined
[2025-07-22 11:32:02] 2025-07-22 15:31:34,050 | INFO     | [job] job monitor thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,087 | INFO     | [data] copytool_in thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,131 | INFO     | [payload] control thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,226 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,432 | INFO     | [job] control thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,456 | INFO     | [job] validate thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,493 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,643 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,647 | INFO     | [data] control thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:34,883 | INFO     | [payload] validate_post thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:35,101 | INFO     | [payload] failed_post thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:35,387 | INFO     | [data] copytool_out thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:35,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:32:02] 2025-07-22 15:31:36,539 | INFO     | [job] queue monitor thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:36,602 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:42,734 | INFO     | job.realtimelogging is not enabled
[2025-07-22 11:32:02] 2025-07-22 15:31:43,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 11:32:02] 2025-07-22 15:31:43,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183752025920)>', '<ExcThread(monitor, started 140182959417088)>']
[2025-07-22 11:32:02] 2025-07-22 15:31:48,802 | INFO     | all workflow threads have been joined
[2025-07-22 11:32:02] 2025-07-22 15:31:48,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 11:32:02] 2025-07-22 15:31:48,802 | INFO     | traces error code: 0
[2025-07-22 11:32:02] 2025-07-22 15:31:48,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 11:32:02] 2025-07-22 15:32:02,355 | INFO     | PID=1123053 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 11:32:02] 2025-07-22 15:32:02,355 | INFO     | .. there are 16 such processes running
[2025-07-22 11:32:02] 2025-07-22 15:32:02,356 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 11:32:02] 2025-07-22 15:32:02,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 11:32:02] 2025-07-22 15:32:02,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 11:32:02] 2025-07-22 15:32:02,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 11:32:02] 2025-07-22 15:32:02,356 | INFO     | [monitor] control thread has ended
[2025-07-22 11:32:02] 2025-07-22 15:32:02,444 [wrapper] ==== pilot stdout END ====
[2025-07-22 11:32:02] 2025-07-22 15:32:02,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 11:32:02] 2025-07-22 15:32:02,449 [wrapper] pilotpid: 1123053
[2025-07-22 11:32:02] 2025-07-22 15:32:02,450 [wrapper] Pilot exit status: 0
[2025-07-22 11:32:02] 2025-07-22 15:32:02,459 [wrapper] pandaids: 6741741758
[2025-07-22 11:32:02] 2025-07-22 15:32:02,537 [wrapper] cleanup supervisor_pilot 1481837 1123054
[2025-07-22 11:32:02] 2025-07-22 15:32:02,539 [wrapper] Test setup, not cleaning
[2025-07-22 11:32:02] 2025-07-22 15:32:02,541 [wrapper] apfmon messages muted
[2025-07-22 11:32:02] 2025-07-22 15:32:02,543 [wrapper] ==== wrapper stdout END ====
[2025-07-22 11:32:02] 2025-07-22 15:32:02,545 [wrapper] ==== wrapper stderr END ====
[2025-07-22 11:32:02]  *** Error codes and diagnostics ***
[2025-07-22 11:32:02]     "exeErrorCode": 0,
[2025-07-22 11:32:02]     "exeErrorDiag": "",
[2025-07-22 11:32:02]     "pilotErrorCode": 0,
[2025-07-22 11:32:02]     "pilotErrorDiag": "",
[2025-07-22 11:32:02]  *** Listing of results directory ***
[2025-07-22 11:32:02] total 568984
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 00:54 pilot3.tar.gz
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 01:04 queuedata.json
[2025-07-22 11:32:02] -rwx------. 1 boincer umatlas     36292 Jul 22 01:04 runpilot2-wrapper.sh
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas       100 Jul 22 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 11:32:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 10:21 run_atlas
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas       105 Jul 22 10:21 job.xml
[2025-07-22 11:32:02] -rw-r--r--. 2 boincer umatlas 319511183 Jul 22 10:21 EVNT.45697451._000220.pool.root.1
[2025-07-22 11:32:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 10:21 start_atlas.sh
[2025-07-22 11:32:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 10:21 shared
[2025-07-22 11:32:02] -rw-r--r--. 2 boincer umatlas    542896 Jul 22 10:21 input.tar.gz
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas         0 Jul 22 10:21 boinc_lockfile
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas      2634 Jul 22 10:21 pandaJob.out
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas    977712 Jul 22 10:21 agis_schedconf.cvmfs.json
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas   1593031 Jul 22 10:21 agis_ddmendpoints.agis.ALL.json
[2025-07-22 11:32:02] drwx------. 4 boincer umatlas      4096 Jul 22 10:21 pilot3
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas      7171 Jul 22 11:29 init_data.xml
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas 257794474 Jul 22 11:30 HITS.45697453._005496.pool.root.1
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas       529 Jul 22 11:31 boinc_task_state.xml
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas        95 Jul 22 11:31 pilot_heartbeat.json
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas      1029 Jul 22 11:31 memory_monitor_summary.json
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas    313643 Jul 22 11:31 log.45697453._005496.job.log.tgz.1
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas      7764 Jul 22 11:31 heartbeat.json
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas        27 Jul 22 11:32 wrapper_checkpoint.txt
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 11:32 boinc_mmap_file
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas       823 Jul 22 11:32 pilotlog.txt
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas    414120 Jul 22 11:32 log.45697453._005496.job.log.1
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas       357 Jul 22 11:32 output.list
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas       620 Jul 22 11:32 runtime_log
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas    747520 Jul 22 11:32 result.tar.gz
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas       651 Jul 22 11:32 ZhALDmYMKy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdVILDmto07Xn.diag
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas      8660 Jul 22 11:32 runtime_log.err
[2025-07-22 11:32:02] -rw-r--r--. 1 boincer umatlas     21605 Jul 22 11:32 stderr.txt
[2025-07-22 11:32:02] HITS file was successfully produced:
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas 257794474 Jul 22 11:30 shared/HITS.pool.root.1
[2025-07-22 11:32:02]  *** Contents of shared directory: ***
[2025-07-22 11:32:02] total 565068
[2025-07-22 11:32:02] -rw-r--r--. 2 boincer umatlas 319511183 Jul 22 10:21 ATLAS.root_0
[2025-07-22 11:32:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 10:21 start_atlas.sh
[2025-07-22 11:32:02] -rw-r--r--. 2 boincer umatlas    542896 Jul 22 10:21 input.tar.gz
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas 257794474 Jul 22 11:30 HITS.pool.root.1
[2025-07-22 11:32:02] -rw-------. 1 boincer umatlas    747520 Jul 22 11:32 result.tar.gz
11:32:04 (1119436): run_atlas exited; CPU time 31333.168205
11:32:04 (1119436): called boinc_finish(0)

</stderr_txt>
]]>

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