Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-22 23:19:31 (8760): Detected: vboxwrapper 26206
2025-07-22 23:19:31 (8760): Detected: BOINC client v8.0.2
2025-07-22 23:19:32 (8760): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-07-22 23:19:32 (8760): Successfully copied 'init_data.xml' to the shared directory.
2025-07-22 23:19:32 (8760): Create VM. (boinc_0ca7ca9059b500f4, slot#1)
2025-07-22 23:19:33 (8760): Setting Memory Size for VM. (4400MB)
2025-07-22 23:19:33 (8760): Setting CPU Count for VM. (4)
2025-07-22 23:19:33 (8760): Setting Chipset Options for VM.
2025-07-22 23:19:34 (8760): Setting Graphics Controller Options for VM.
2025-07-22 23:19:34 (8760): Setting Boot Options for VM.
2025-07-22 23:19:34 (8760): Setting Network Configuration for NAT.
2025-07-22 23:19:34 (8760): Enabling VM Network Access.
2025-07-22 23:19:35 (8760): Disabling USB Support for VM.
2025-07-22 23:19:35 (8760): Disabling COM Port Support for VM.
2025-07-22 23:19:35 (8760): Disabling LPT Port Support for VM.
2025-07-22 23:19:35 (8760): Disabling Audio Support for VM.
2025-07-22 23:19:36 (8760): Disabling Clipboard Support for VM.
2025-07-22 23:19:36 (8760): Disabling Drag and Drop Support for VM.
2025-07-22 23:19:36 (8760): Adding storage controller(s) to VM.
2025-07-22 23:19:36 (8760): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-22 23:19:39 (8760): Adding VirtualBox Guest Additions to VM.
2025-07-22 23:19:40 (8760): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-22 23:19:40 (8760): forwarding host port 63077 to guest port 80
2025-07-22 23:19:40 (8760): Enabling remote desktop for VM.
2025-07-22 23:19:40 (8760): Required extension pack not installed, remote desktop not enabled.
2025-07-22 23:19:40 (8760): Enabling shared directory for VM.
2025-07-22 23:19:41 (8760): Starting VM using VBoxManage interface. (boinc_0ca7ca9059b500f4, slot#1)
2025-07-22 23:19:48 (8760): Successfully started VM. (PID = '1288')
2025-07-22 23:19:48 (8760): Reporting VM Process ID to BOINC.
2025-07-22 23:19:48 (8760): Guest Log: BIOS: VirtualBox 7.1.10
2025-07-22 23:19:48 (8760): Guest Log: CPUID EDX: 0x178bfbff
2025-07-22 23:19:48 (8760): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-22 23:19:48 (8760): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-22 23:19:48 (8760): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-22 23:19:48 (8760): Detected: Web Application Enabled (http://localhost:63077)
2025-07-22 23:19:48 (8760): Preference change detected
2025-07-22 23:19:48 (8760): Setting CPU throttle for VM. (100%)
2025-07-22 23:19:48 (8760): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-22 23:19:50 (8760): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-22 23:19:50 (8760): Guest Log: BIOS: Booting from Hard Disk...
2025-07-22 23:19:56 (8760): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-22 23:19:56 (8760): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-22 23:19:56 (8760): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-22 23:20:05 (8760): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-22 23:20:05 (8760): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-22 23:20:12 (8760): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000277 main     Log opened 2025-07-22T23:20:10.901472000Z
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000413 main     OS Product: Linux
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000583 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000660 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000714 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000716 main     Process ID: 1270
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.000717 main     Package type: LINUX_64BITS_GENERIC
2025-07-22 23:20:12 (8760): Guest Log: 00:00:00.001965 main     5.2.32 r132073 started. Verbose level = 0
2025-07-22 23:20:18 (8760): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-22 23:20:18 (8760): Guest Log: [INFO] Mounting shared directory
2025-07-22 23:20:18 (8760): Guest Log: [INFO] Checking for init_data.xml
2025-07-22 23:20:22 (8760): Guest Log: 00:00:10.005511 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 019 178 000ns (GuestNow=1 753 219 221 886 728 000 ns GuestLast=1 753 226 410 905 906 000 ns fSetTimeLastLoop=true )
2025-07-22 23:20:28 (8760): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-22 23:20:28 (8760): Guest Log: [INFO] Detected branch: prod
2025-07-22 23:20:28 (8760): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-22 23:20:28 (8760): Guest Log: Copying input files
2025-07-22 23:20:30 (8760): Guest Log: Copied input files into RunAtlas.
2025-07-22 23:20:31 (8760): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-22 23:20:31 (8760): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-22 23:20:31 (8760): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-22 23:20:31 (8760): Guest Log: Further information can be found at the LHC@home message board.
2025-07-22 23:20:45 (8760): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-22 23:20:45 (8760): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-22 23:20:45 (8760): Guest Log: 2.6.3.0 1556 0 30164 148635 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-22 23:20:46 (8760): Guest Log: copied the webapp to /var/www
2025-07-22 23:20:46 (8760): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-22 23:20:46 (8760): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-22 23:20:46 (8760): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-22 23:20:46 (8760): Guest Log:  *** Starting ATLAS job. (PandaID=6741685826 taskID=45697523) ***
2025-07-23 01:02:18 (8760): Status Report: Elapsed Time: '6000.418367'
2025-07-23 01:02:19 (8760): Status Report: CPU Time: '22319.593750'
2025-07-23 02:46:49 (8760): Status Report: Elapsed Time: '12000.714312'
2025-07-23 02:46:49 (8760): Status Report: CPU Time: '47258.359375'
2025-07-23 04:32:48 (8760): Status Report: Elapsed Time: '18001.034769'
2025-07-23 04:32:48 (8760): Status Report: CPU Time: '72538.625000'
2025-07-23 05:21:02 (8760): Guest Log:  *** Job finished ***
2025-07-23 05:21:02 (8760): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:20:43,091 | INFO     | all workflow threads have been joined
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:20:43,091 | INFO     | end of generic workflow (traces error code: 0)
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:20:43,091 | INFO     | traces error code: 0
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:20:43,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,211 | INFO     | PID=5880 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,212 | INFO     | found 0 job(s) in 20 queues
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,213 | INFO     | [monitor] control thread has ended
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,325 [wrapper] ==== pilot stdout END ====
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,332 [wrapper] ==== wrapper stdout RESUME ====
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,340 [wrapper] pilotpid: 5880
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,347 [wrapper] Pilot exit status: 0
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,433 [wrapper] pandaids: 6741685826
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,488 [wrapper] cleanup supervisor_pilot 24219 5881
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,496 [wrapper] Test setup, not cleaning
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,509 [wrapper] apfmon messages muted
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,524 [wrapper] ==== wrapper stdout END ====
2025-07-23 05:21:02 (8760): Guest Log: 2025-07-23 03:21:01,535 [wrapper] ==== wrapper stderr END ====
2025-07-23 05:21:02 (8760): Guest Log:  *** Error codes and diagnostics ***
2025-07-23 05:21:02 (8760): Guest Log:     "exeErrorCode": 0,
2025-07-23 05:21:02 (8760): Guest Log:     "exeErrorDiag": "",
2025-07-23 05:21:02 (8760): Guest Log:     "pilotErrorCode": 0,
2025-07-23 05:21:02 (8760): Guest Log:     "pilotErrorDiag": "",
2025-07-23 05:21:02 (8760): Guest Log:  *** Listing of results directory ***
2025-07-23 05:21:02 (8760): Guest Log: total 255228
2025-07-23 05:21:02 (8760): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 21 20:13 pilot3.tar.gz
2025-07-23 05:21:02 (8760): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 21 20:35 queuedata.json
2025-07-23 05:21:02 (8760): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 21 20:36 runpilot2-wrapper.sh
2025-07-23 05:21:02 (8760): Guest Log: -rwxr-xr-x. 1 atlas atlas      7175 Jul 22 21:20 init_data.xml
2025-07-23 05:21:02 (8760): Guest Log: -rwxr-xr-x. 1 atlas atlas    542900 Jul 22 21:20 input.tar.gz
2025-07-23 05:21:02 (8760): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 22 21:20 start_atlas.sh
2025-07-23 05:21:02 (8760): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 22 21:20 EVNT.45697521._000056.pool.root.1 -> /data/./ATLAS.root_0
2025-07-23 05:21:02 (8760): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jul 22 21:20 pandaJob.out
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas    977736 Jul 22 21:21 agis_schedconf.cvmfs.json
2025-07-23 05:21:02 (8760): Guest Log: drwx------. 4 atlas atlas      4096 Jul 22 21:22 pilot3
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas 253305559 Jul 23 03:19 HITS.45697523._001376.pool.root.1
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas      1052 Jul 23 03:19 memory_monitor_summary.json
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas   1593031 Jul 23 03:19 agis_ddmendpoints.agis.ALL.json
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas    370188 Jul 23 03:19 log.45697523._001376.job.log.tgz.1
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas      7799 Jul 23 03:20 heartbeat.json
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas        95 Jul 23 03:21 pilot_heartbeat.json
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas       744 Jul 23 03:21 pilotlog.txt
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas   1752818 Jul 23 03:21 log.45697523._001376.job.log.1
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas       357 Jul 23 03:21 output.list
2025-07-23 05:21:02 (8760): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 23 03:21 runtime_log
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas   2140160 Jul 23 03:21 result.tar.gz
2025-07-23 05:21:02 (8760): Guest Log: -rw-r--r--. 1 atlas atlas      8590 Jul 23 03:21 runtime_log.err
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas       659 Jul 23 03:21 nPJNDmWQCy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmX4sKDmFrVVhn.diag
2025-07-23 05:21:02 (8760): Guest Log: Looking for outputfile HITS.45697523._001376.pool.root.1
2025-07-23 05:21:02 (8760): Guest Log: HITS file was successfully produced
2025-07-23 05:21:02 (8760): Guest Log: -rw-------. 1 atlas atlas 253305559 Jul 23 03:19 /home/atlas/RunAtlas/HITS.45697523._001376.pool.root.1
2025-07-23 05:21:04 (8760): Guest Log: Successfully finished the ATLAS job!
2025-07-23 05:21:04 (8760): Guest Log: Copying the results back to the shared directory!
2025-07-23 05:21:05 (8760): Guest Log:  *** Contents of shared directory: ***
2025-07-23 05:21:05 (8760): Guest Log: total 560860
2025-07-23 05:21:05 (8760): Guest Log: -rwxrwxrwx. 1 root root 318299487 Jul 22 21:19 ATLAS.root_0
2025-07-23 05:21:05 (8760): Guest Log: -rwxrwxrwx. 1 root root 253305559 Jul 23 03:21 HITS.pool.root.1
2025-07-23 05:21:05 (8760): Guest Log: -rwxrwxrwx. 1 root root      7175 Jul 22 21:19 init_data.xml
2025-07-23 05:21:05 (8760): Guest Log: -rwxrwxrwx. 1 root root    542900 Jul 22 14:31 input.tar.gz
2025-07-23 05:21:05 (8760): Guest Log: -rwxrwxrwx. 1 root root   2140160 Jul 23 03:21 result.tar.gz
2025-07-23 05:21:05 (8760): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 22 14:31 start_atlas.sh
2025-07-23 05:21:05 (8760): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-23 05:21:05 (8760): VM Completion File Detected.
2025-07-23 05:21:05 (8760): Powering off VM.
2025-07-23 05:21:06 (8760): Successfully stopped VM.
2025-07-23 05:21:06 (8760): Deregistering VM. (boinc_0ca7ca9059b500f4, slot#1)
2025-07-23 05:21:06 (8760): Removing network bandwidth throttle group from VM.
2025-07-23 05:21:06 (8760): Removing VM from VirtualBox.
05:21:11 (8760): called boinc_finish(0)

</stderr_txt>
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