Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:21:38 (5048): wrapper (7.7.26015): starting
02:21:38 (5048): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 02:21:38] Arguments: --nthreads 8
[2025-07-23 02:21:38] Threads: 8
[2025-07-23 02:21:38] Checking for CVMFS
[2025-07-23 02:21:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 02:21:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 02:21:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 02:21:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 02:21:43] 2.11.2.0 20015 103051 136800 148639 3 61 19698737 25165824 2455 130560 0 78446486 99.863 46308141 2947 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 02:21:43] CVMFS is ok
[2025-07-23 02:21:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 02:21:43] Checking for apptainer binary...
[2025-07-23 02:21:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 02:21:43] Running /usr/bin/apptainer --version
[2025-07-23 02:21:43] apptainer version 1.3.2-1.el7
[2025-07-23 02:21:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 02:21:45] cg-vwn356.simple-grid.lan
[2025-07-23 02:21:45] apptainer works
[2025-07-23 02:21:45] Set ATHENA_PROC_NUMBER=8
[2025-07-23 02:21:45] Set ATHENA_CORE_NUMBER=8
[2025-07-23 02:21:45] Starting ATLAS job with PandaID=6741760160
[2025-07-23 02:21:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 08:57:59]  *** The last 200 lines of the pilot log: ***
[2025-07-23 08:57:59] 2025-07-23 06:17:27,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 08:57:59] 2025-07-23 06:17:27,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 08:57:59] 2025-07-23 06:17:27,971 | INFO     | fitting pss+swap vs Time
[2025-07-23 08:57:59] 2025-07-23 06:17:27,972 | INFO     | sum of square deviations: 12844082682.5
[2025-07-23 08:57:59] 2025-07-23 06:17:27,975 | INFO     | sum of deviations: -71045412351.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,976 | INFO     | mean x: 1753240814.5
[2025-07-23 08:57:59] 2025-07-23 06:17:27,976 | INFO     | mean y: 2570192.2601156067
[2025-07-23 08:57:59] 2025-07-23 06:17:27,976 | INFO     | -- intersect: 9700399122.189661
[2025-07-23 08:57:59] 2025-07-23 06:17:27,976 | INFO     | intersect: 9700399122.189661
[2025-07-23 08:57:59] 2025-07-23 06:17:27,977 | INFO     | chi2: 3.363251357950588
[2025-07-23 08:57:59] 2025-07-23 06:17:27,977 | INFO     | sum of square deviations: 12295263090.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,985 | INFO     | sum of deviations: -22885445274.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,985 | INFO     | mean x: 1753240662.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,985 | INFO     | mean y: 2583459.3049853374
[2025-07-23 08:57:59] 2025-07-23 06:17:27,985 | INFO     | -- intersect: 3265929101.3340683
[2025-07-23 08:57:59] 2025-07-23 06:17:27,985 | INFO     | intersect: 3265929101.3340683
[2025-07-23 08:57:59] 2025-07-23 06:17:27,986 | INFO     | chi2: 1.7992524251105306
[2025-07-23 08:57:59] 2025-07-23 06:17:27,986 | INFO     | current chi2=1.7992524251105306 (change=46.502588310648505 %)
[2025-07-23 08:57:59] 2025-07-23 06:17:27,987 | INFO     | sum of square deviations: 11762304260.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,990 | INFO     | sum of deviations: -22532765447.500004
[2025-07-23 08:57:59] 2025-07-23 06:17:27,990 | INFO     | mean x: 1753240509.5
[2025-07-23 08:57:59] 2025-07-23 06:17:27,990 | INFO     | mean y: 2583560.657738095
[2025-07-23 08:57:59] 2025-07-23 06:17:27,991 | INFO     | -- intersect: 3361224546.333015
[2025-07-23 08:57:59] 2025-07-23 06:17:27,991 | INFO     | intersect: 3361224546.333015
[2025-07-23 08:57:59] 2025-07-23 06:17:27,991 | INFO     | chi2: 1.7986390770075575
[2025-07-23 08:57:59] 2025-07-23 06:17:27,991 | INFO     | current chi2=1.7986390770075575 (change=0.03408905245384951 %)
[2025-07-23 08:57:59] 2025-07-23 06:17:27,991 | INFO     | right removable region: 335
[2025-07-23 08:57:59] 2025-07-23 06:17:27,992 | INFO     | sum of square deviations: 12295263090.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,995 | INFO     | sum of deviations: -127716395095.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,995 | INFO     | mean x: 1753240967.0
[2025-07-23 08:57:59] 2025-07-23 06:17:27,996 | INFO     | mean y: 2585843.211143695
[2025-07-23 08:57:59] 2025-07-23 06:17:27,996 | INFO     | -- intersect: 18214283665.29588
[2025-07-23 08:57:59] 2025-07-23 06:17:27,996 | INFO     | intersect: 18214283665.29588
[2025-07-23 08:57:59] 2025-07-23 06:17:27,996 | INFO     | chi2: 1.8796844322323427
[2025-07-23 08:57:59] 2025-07-23 06:17:27,996 | INFO     | current chi2=1.8796844322323427 (change=44.11109274396497 %)
[2025-07-23 08:57:59] 2025-07-23 06:17:27,997 | INFO     | sum of square deviations: 11762304260.0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,000 | INFO     | sum of deviations: -126482789075.5
[2025-07-23 08:57:59] 2025-07-23 06:17:28,001 | INFO     | mean x: 1753241119.5
[2025-07-23 08:57:59] 2025-07-23 06:17:28,001 | INFO     | mean y: 2585473.901785714
[2025-07-23 08:57:59] 2025-07-23 06:17:28,001 | INFO     | -- intersect: 18855594358.422173
[2025-07-23 08:57:59] 2025-07-23 06:17:28,001 | INFO     | intersect: 18855594358.422173
[2025-07-23 08:57:59] 2025-07-23 06:17:28,001 | INFO     | chi2: 1.8622133060193955
[2025-07-23 08:57:59] 2025-07-23 06:17:28,001 | INFO     | current chi2=1.8622133060193955 (change=0.9294712406698094 %)
[2025-07-23 08:57:59] 2025-07-23 06:17:28,002 | INFO     | left removable region: 20
[2025-07-23 08:57:59] 2025-07-23 06:17:28,002 | INFO     | sum of square deviations: 9691828230.0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,005 | INFO     | sum of deviations: -59892097992.0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,005 | INFO     | mean x: 1753241089.0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,005 | INFO     | mean y: 2594105.0634920634
[2025-07-23 08:57:59] 2025-07-23 06:17:28,005 | INFO     | -- intersect: 10837008893.901407
[2025-07-23 08:57:59] 2025-07-23 06:17:28,005 | INFO     | intersect: 10837008893.901407
[2025-07-23 08:57:59] 2025-07-23 06:17:28,006 | INFO     | chi2: 0.24793160229945904
[2025-07-23 08:57:59] 2025-07-23 06:17:28,006 | INFO     | -- intersect: 10837008893.901407
[2025-07-23 08:57:59] 2025-07-23 06:17:28,006 | INFO     | current memory leak: -6.18 B/s (using 315 data points, chi2=0.25)
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | ..............................
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | . Timing measurements:
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | . get job = 0 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | . initial setup = 2 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | . payload setup = 11 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,007 | INFO     | . stage-in = 0 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,008 | INFO     | . payload execution = 21069 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,008 | INFO     | . stage-out = 3 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,008 | INFO     | . log creation = 1 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,008 | INFO     | ..............................
[2025-07-23 08:57:59] 2025-07-23 06:17:28,293 | INFO     | 
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | job summary report
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | --------------------------------------------------
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | PanDA job id: 6741760160
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | task id: 45697472
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | errors: (none)
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | pilot state: finished 
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | transexitcode: 0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | exeerrorcode: 0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,294 | INFO     | exeerrordiag: 
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | exitcode: 0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | exitmsg: OK
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | cpuconsumptiontime: 81646 s
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | nevents: 400
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | neventsw: 0
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | pid: 15659
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | pgrp: 15659
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | corecount: 8
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | event service: False
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | sizes: {0: 2397359, 1: 2397558, 8: 2397820, 12: 2397848, 21085: 2431069, 21086: 2431068, 21091: 2440278, 21093: 2440334, 21186: 2440528}
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | --------------------------------------------------
[2025-07-23 08:57:59] 2025-07-23 06:17:28,295 | INFO     | 
[2025-07-23 08:57:59] 2025-07-23 06:17:28,296 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-23 08:57:59] 2025-07-23 06:17:28,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,641 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 08:57:59] 2025-07-23 06:17:28,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 08:57:59] 2025-07-23 06:17:28,642 | INFO     | job 6741760160 has completed (purged errors)
[2025-07-23 08:57:59] 2025-07-23 06:17:28,642 | INFO     | overall cleanup function is called
[2025-07-23 08:57:59] 2025-07-23 06:17:29,650 | INFO     | --- collectZombieJob: --- 10, [15659]
[2025-07-23 08:57:59] 2025-07-23 06:17:29,651 | INFO     | zombie collector waiting for pid 15659
[2025-07-23 08:57:59] 2025-07-23 06:17:29,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 08:57:59] 2025-07-23 06:17:29,651 | INFO     | collected zombie processes
[2025-07-23 08:57:59] 2025-07-23 06:17:29,651 | INFO     | will attempt to kill all subprocesses of pid=15659
[2025-07-23 08:57:59] 2025-07-23 06:17:29,755 | INFO     | process IDs to be killed: [15659] (in reverse order)
[2025-07-23 08:57:59] 2025-07-23 06:17:30,553 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 08:57:59] 2025-07-23 06:17:30,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 08:57:59] 2025-07-23 06:17:30,557 | INFO     | did not find any defunct processes belonging to 15659
[2025-07-23 08:57:59] 2025-07-23 06:17:30,560 | INFO     | did not find any defunct processes belonging to 15659
[2025-07-23 08:57:59] 2025-07-23 06:17:30,560 | INFO     | ready for new job
[2025-07-23 08:57:59] 2025-07-23 06:17:30,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 08:57:59] 2025-07-23 06:17:30,562 | INFO     | ***************************************
[2025-07-23 08:57:59] 2025-07-23 06:17:30,562 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 08:57:59] 2025-07-23 06:17:30,563 | INFO     | ***************************************
[2025-07-23 08:57:59] 2025-07-23 06:17:30,563 | INFO     | 
[2025-07-23 08:57:59] 2025-07-23 06:17:30,563 | INFO     | pilot is running in a VM
[2025-07-23 08:57:59] 2025-07-23 06:17:30,565 | INFO     | architecture information:
[2025-07-23 08:57:59] 2025-07-23 06:17:30,572 | INFO     | executing command: cat /etc/os-release
[2025-07-23 08:57:59] 2025-07-23 06:17:30,769 | INFO     | cat /etc/os-release:
[2025-07-23 08:57:59] NAME="CentOS Linux"
[2025-07-23 08:57:59] VERSION="7 (Core)"
[2025-07-23 08:57:59] ID="centos"
[2025-07-23 08:57:59] ID_LIKE="rhel fedora"
[2025-07-23 08:57:59] VERSION_ID="7"
[2025-07-23 08:58:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 08:58:00] ANSI_COLOR="0;31"
[2025-07-23 08:58:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 08:58:00] HOME_URL="https://www.centos.org/"
[2025-07-23 08:58:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 08:58:00] 
[2025-07-23 08:58:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 08:58:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 08:58:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 08:58:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 08:58:00] 
[2025-07-23 08:58:00] 2025-07-23 06:17:30,769 | INFO     | ***************************************
[2025-07-23 08:58:00] 2025-07-23 06:17:31,273 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-23 08:58:00] 2025-07-23 06:17:31,501 | INFO     | sufficient remaining disk space (496783851520 B)
[2025-07-23 08:58:00] 2025-07-23 06:17:31,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 08:58:00] 2025-07-23 06:17:31,501 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 08:58:00] 2025-07-23 06:17:31,502 | INFO     | update_server=False
[2025-07-23 08:58:00] 2025-07-23 06:17:31,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 08:58:00] 2025-07-23 06:17:31,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 08:58:00] 2025-07-23 06:17:31,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 08:58:00] 2025-07-23 06:17:31,570 | INFO     | all job control threads have been joined
[2025-07-23 08:58:00] 2025-07-23 06:17:31,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 08:58:00] 2025-07-23 06:17:31,631 | INFO     | aborting loop
[2025-07-23 08:58:00] 2025-07-23 06:17:31,790 | INFO     | all payload control threads have been joined
[2025-07-23 08:58:00] 2025-07-23 06:17:32,507 | INFO     | [job] retrieve thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:32,548 | INFO     | all data control threads have been joined
[2025-07-23 08:58:00] 2025-07-23 06:17:32,577 | INFO     | [job] control thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:32,637 | INFO     | [job] job monitor thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:32,796 | INFO     | [payload] control thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:32,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:32,977 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 08:58:00] 2025-07-23 06:17:33,222 | INFO     | [payload] validate_post thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,510 | INFO     | [data] copytool_out thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,527 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,554 | INFO     | [data] control thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,578 | INFO     | [job] validate thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,772 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,959 | INFO     | [data] copytool_in thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:33,989 | INFO     | [payload] failed_post thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:34,157 | INFO     | [job] queue monitor thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:35,515 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 08:58:00] 2025-07-23 06:17:36,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825818146624)>', '<ExcThread(monitor, started 139825386604288)>']
[2025-07-23 08:58:00] 2025-07-23 06:17:41,488 | INFO     | all workflow threads have been joined
[2025-07-23 08:58:00] 2025-07-23 06:17:41,489 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 08:58:00] 2025-07-23 06:17:41,489 | INFO     | traces error code: 0
[2025-07-23 08:58:00] 2025-07-23 06:17:41,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 08:58:00] 2025-07-23 06:18:01,632 | INFO     | PID=9050 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-23 08:58:00] 2025-07-23 06:18:01,633 | INFO     | .. there are 9 such processes running
[2025-07-23 08:58:00] 2025-07-23 06:18:01,633 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 08:58:00] 2025-07-23 06:18:01,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 08:58:00] 2025-07-23 06:18:01,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 08:58:00] 2025-07-23 06:18:01,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 08:58:00] 2025-07-23 06:18:01,634 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 08:58:00] 2025-07-23 06:18:01,634 | INFO     | [monitor] control thread has ended
[2025-07-23 08:58:00] 2025-07-23 06:18:01,977 [wrapper] ==== pilot stdout END ====
[2025-07-23 08:58:00] 2025-07-23 06:18:02,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 08:58:00] 2025-07-23 06:18:02,101 [wrapper] pilotpid: 9050
[2025-07-23 08:58:00] 2025-07-23 06:18:02,148 [wrapper] Pilot exit status: 0
[2025-07-23 08:58:00] 2025-07-23 06:18:02,506 [wrapper] pandaids: 6741760160
[2025-07-23 08:58:00] 2025-07-23 06:18:03,182 [wrapper] cleanup supervisor_pilot 32260 9051
[2025-07-23 08:58:00] 2025-07-23 06:18:03,195 [wrapper] Test setup, not cleaning
[2025-07-23 08:58:00] 2025-07-23 06:18:03,201 [wrapper] apfmon messages muted
[2025-07-23 08:58:00] 2025-07-23 06:18:03,208 [wrapper] ==== wrapper stdout END ====
[2025-07-23 08:58:00] 2025-07-23 06:18:03,215 [wrapper] ==== wrapper stderr END ====
[2025-07-23 08:58:00]  *** Error codes and diagnostics ***
[2025-07-23 08:58:00]     "exeErrorCode": 0,
[2025-07-23 08:58:00]     "exeErrorDiag": "",
[2025-07-23 08:58:00]     "pilotErrorCode": 0,
[2025-07-23 08:58:00]     "pilotErrorDiag": "",
[2025-07-23 08:58:00]  *** Listing of results directory ***
[2025-07-23 08:58:00] total 615164
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc    530466 Jul 22 09:08 pilot3.tar.gz
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc      5112 Jul 22 09:50 queuedata.json
[2025-07-23 08:58:00] -rwx------. 1 boinc boinc     36292 Jul 22 09:50 runpilot2-wrapper.sh
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc       100 Jul 23 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 08:58:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 02:21 run_atlas
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc       105 Jul 23 02:21 job.xml
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc      6391 Jul 23 02:21 init_data.xml
[2025-07-23 08:58:00] -rw-r--r--. 2 boinc boinc 330979771 Jul 23 02:21 EVNT.45697470._000045.pool.root.1
[2025-07-23 08:58:00] -rw-r--r--. 2 boinc boinc     15095 Jul 23 02:21 start_atlas.sh
[2025-07-23 08:58:00] drwxrwx--x. 2 boinc boinc        68 Jul 23 02:21 shared
[2025-07-23 08:58:00] -rw-r--r--. 2 boinc boinc    542892 Jul 23 02:21 input.tar.gz
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc         0 Jul 23 02:21 boinc_lockfile
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc      2610 Jul 23 02:21 pandaJob.out
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc    977736 Jul 23 02:24 agis_schedconf.cvmfs.json
[2025-07-23 08:58:00] drwx------. 4 boinc boinc      4096 Jul 23 02:24 pilot3
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc 290603576 Jul 23 08:14 HITS.45697472._001102.pool.root.1
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc       531 Jul 23 08:14 boinc_task_state.xml
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc      1018 Jul 23 08:15 memory_monitor_summary.json
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc   1593041 Jul 23 08:15 agis_ddmendpoints.agis.ALL.json
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc    432259 Jul 23 08:15 log.45697472._001102.job.log.tgz.1
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc      7779 Jul 23 08:17 heartbeat.json
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc       889 Jul 23 08:18 pilotlog.txt
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc        95 Jul 23 08:18 pilot_heartbeat.json
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc   1807824 Jul 23 08:18 log.45697472._001102.job.log.1
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc       357 Jul 23 08:18 output.list
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc       620 Jul 23 08:18 runtime_log
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc   2263040 Jul 23 08:18 result.tar.gz
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc      8660 Jul 23 08:18 runtime_log.err
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc       658 Jul 23 08:18 lVpLDmLwMy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYeuKDmidpTnm.diag
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc      8192 Jul 23 08:57 boinc_mmap_file
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc        28 Jul 23 08:57 wrapper_checkpoint.txt
[2025-07-23 08:58:00] -rw-r--r--. 1 boinc boinc     20575 Jul 23 08:58 stderr.txt
[2025-07-23 08:58:00] HITS file was successfully produced:
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc 290603576 Jul 23 08:14 shared/HITS.pool.root.1
[2025-07-23 08:58:00]  *** Contents of shared directory: ***
[2025-07-23 08:58:00] total 609780
[2025-07-23 08:58:00] -rw-r--r--. 2 boinc boinc 330979771 Jul 23 02:21 ATLAS.root_0
[2025-07-23 08:58:00] -rw-r--r--. 2 boinc boinc     15095 Jul 23 02:21 start_atlas.sh
[2025-07-23 08:58:00] -rw-r--r--. 2 boinc boinc    542892 Jul 23 02:21 input.tar.gz
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc 290603576 Jul 23 08:14 HITS.pool.root.1
[2025-07-23 08:58:00] -rw-------. 1 boinc boinc   2263040 Jul 23 08:18 result.tar.gz
08:58:01 (5048): run_atlas exited; CPU time 81919.322406
08:58:01 (5048): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN