Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:13:27 (2413476): wrapper (7.7.26015): starting
18:13:27 (2413476): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 18:13:27] Arguments: --nthreads 12
[2025-07-24 18:13:27] Threads: 12
[2025-07-24 18:13:27] Checking for CVMFS
[2025-07-24 18:13:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 18:13:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 18:13:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 18:13:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 18:13:30] 2.13.0.0 1164766 3686 79476 148710 1 60 3910556 4096001 10654 130560 0 38511628 99.999 140445 248 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-24 18:13:30] CVMFS is ok
[2025-07-24 18:13:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 18:13:30] Checking for apptainer binary...
[2025-07-24 18:13:30] apptainer is not installed, using version from CVMFS
[2025-07-24 18:13:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 18:13:37] epyc7v12
[2025-07-24 18:13:37] apptainer works
[2025-07-24 18:13:37] Set ATHENA_PROC_NUMBER=12
[2025-07-24 18:13:37] Set ATHENA_CORE_NUMBER=12
[2025-07-24 18:13:37] Starting ATLAS job with PandaID=6741741374
[2025-07-24 18:13:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 21:03:02]  *** The last 200 lines of the pilot log: ***
[2025-07-24 21:03:02] 2025-07-24 21:02:25,466 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 21:03:02] 2025-07-24 21:02:25,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 21:03:02] 2025-07-24 21:02:25,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:03:02] 2025-07-24 21:02:25,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:03:02] 2025-07-24 21:02:25,470 | INFO     | fitting pss+swap vs Time
[2025-07-24 21:03:02] 2025-07-24 21:02:25,470 | INFO     | sum of square deviations: 1199940638.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,471 | INFO     | sum of deviations: 60179090426.00004
[2025-07-24 21:03:02] 2025-07-24 21:02:25,471 | INFO     | mean x: 1753386045.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,471 | INFO     | mean y: 2619711.006369427
[2025-07-24 21:03:02] 2025-07-24 21:02:25,472 | INFO     | -- intersect: -87932711431.38435
[2025-07-24 21:03:02] 2025-07-24 21:02:25,472 | INFO     | intersect: -87932711431.38435
[2025-07-24 21:03:02] 2025-07-24 21:02:25,472 | INFO     | chi2: 5.019132191715591
[2025-07-24 21:03:02] 2025-07-24 21:02:25,472 | INFO     | sum of square deviations: 1088905998.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,473 | INFO     | sum of deviations: 69549438499.49998
[2025-07-24 21:03:02] 2025-07-24 21:02:25,473 | INFO     | mean x: 1753385892.5
[2025-07-24 21:03:02] 2025-07-24 21:02:25,474 | INFO     | mean y: 2632165.7697368423
[2025-07-24 21:03:02] 2025-07-24 21:02:25,474 | INFO     | -- intersect: -111987754993.72836
[2025-07-24 21:03:02] 2025-07-24 21:02:25,474 | INFO     | intersect: -111987754993.72836
[2025-07-24 21:03:02] 2025-07-24 21:02:25,474 | INFO     | chi2: 4.236345959751581
[2025-07-24 21:03:02] 2025-07-24 21:02:25,474 | INFO     | current chi2=4.236345959751581 (change=15.596047325791695 %)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,474 | INFO     | right removable region: 151
[2025-07-24 21:03:02] 2025-07-24 21:02:25,475 | INFO     | sum of square deviations: 1088905998.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | sum of deviations: 7800468421.499996
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | mean x: 1753386197.5
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | mean y: 2691434.085526316
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | -- intersect: -12557836003.00616
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | intersect: -12557836003.00616
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | chi2: 1.1627480028238715
[2025-07-24 21:03:02] 2025-07-24 21:02:25,476 | INFO     | current chi2=1.1627480028238715 (change=76.83368442172008 %)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,477 | INFO     | sum of square deviations: 984941258.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,478 | INFO     | sum of deviations: -7409950905.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,478 | INFO     | mean x: 1753386350.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,478 | INFO     | mean y: 2713658.156462585
[2025-07-24 21:03:02] 2025-07-24 21:02:25,478 | INFO     | -- intersect: 13193862536.800701
[2025-07-24 21:03:02] 2025-07-24 21:02:25,478 | INFO     | intersect: 13193862536.800701
[2025-07-24 21:03:02] 2025-07-24 21:02:25,479 | INFO     | chi2: 0.8575224976233186
[2025-07-24 21:03:02] 2025-07-24 21:02:25,479 | INFO     | current chi2=0.8575224976233186 (change=26.250357296617715 %)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,479 | INFO     | sum of square deviations: 887813855.5
[2025-07-24 21:03:02] 2025-07-24 21:02:25,480 | INFO     | sum of deviations: -8839396052.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,480 | INFO     | mean x: 1753386502.5
[2025-07-24 21:03:02] 2025-07-24 21:02:25,480 | INFO     | mean y: 2715874.704225352
[2025-07-24 21:03:02] 2025-07-24 21:02:25,480 | INFO     | -- intersect: 17460066457.614323
[2025-07-24 21:03:02] 2025-07-24 21:02:25,480 | INFO     | intersect: 17460066457.614323
[2025-07-24 21:03:02] 2025-07-24 21:02:25,481 | INFO     | chi2: 0.8534606287873963
[2025-07-24 21:03:02] 2025-07-24 21:02:25,481 | INFO     | current chi2=0.8534606287873963 (change=0.473674900329734 %)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,481 | INFO     | left removable region: 30
[2025-07-24 21:03:02] 2025-07-24 21:02:25,481 | INFO     | sum of square deviations: 549294020.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,482 | INFO     | sum of deviations: 1773961800.9999998
[2025-07-24 21:03:02] 2025-07-24 21:02:25,482 | INFO     | mean x: 1753386777.0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,482 | INFO     | mean y: 2732906.355371901
[2025-07-24 21:03:02] 2025-07-24 21:02:25,482 | INFO     | -- intersect: -5659883199.999664
[2025-07-24 21:03:02] 2025-07-24 21:02:25,482 | INFO     | intersect: -5659883199.999664
[2025-07-24 21:03:02] 2025-07-24 21:02:25,483 | INFO     | chi2: 0.0008002626140863224
[2025-07-24 21:03:02] 2025-07-24 21:02:25,483 | INFO     | -- intersect: -5659883199.999664
[2025-07-24 21:03:02] 2025-07-24 21:02:25,483 | INFO     | current memory leak: 3.23 B/s (using 121 data points, chi2=0.00)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,483 | INFO     | could have reported an average CPU frequency of 2383 MHz (9 samples)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | ..............................
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . Timing measurements:
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . get job = 0 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . initial setup = 5 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . payload setup = 84 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . stage-in = 0 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . payload execution = 9622 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . stage-out = 3 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | . log creation = 1 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,484 | INFO     | ..............................
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | 
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | job summary report
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | --------------------------------------------------
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | PanDA job id: 6741741374
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | task id: 45697453
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | errors: (none)
[2025-07-24 21:03:02] 2025-07-24 21:02:25,683 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | pilot state: finished 
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | transexitcode: 0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | exeerrorcode: 0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | exeerrordiag: 
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | exitcode: 0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | exitmsg: OK
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | cpuconsumptiontime: 62436 s
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | nevents: 400
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | neventsw: 0
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | pid: 2545379
[2025-07-24 21:03:02] 2025-07-24 21:02:25,684 | INFO     | pgrp: 2545379
[2025-07-24 21:03:02] 2025-07-24 21:02:25,685 | INFO     | corecount: 12
[2025-07-24 21:03:02] 2025-07-24 21:02:25,685 | INFO     | event service: False
[2025-07-24 21:03:02] 2025-07-24 21:02:25,685 | INFO     | sizes: {0: 2397358, 1: 2397557, 12: 2397557, 23: 2397585, 34: 2397613, 44: 2397641, 55: 2397797, 66: 2397825, 73: 2398115, 77: 2398143, 9711: 2426912, 9715: 243595
[2025-07-24 21:03:02] 2025-07-24 21:02:25,685 | INFO     | --------------------------------------------------
[2025-07-24 21:03:02] 2025-07-24 21:02:25,685 | INFO     | 
[2025-07-24 21:03:02] 2025-07-24 21:02:25,685 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-24 21:03:02] 2025-07-24 21:02:26,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 21:03:02] 2025-07-24 21:02:26,206 | INFO     | job 6741741374 has completed (purged errors)
[2025-07-24 21:03:02] 2025-07-24 21:02:26,207 | INFO     | overall cleanup function is called
[2025-07-24 21:03:02] 2025-07-24 21:02:27,215 | INFO     | --- collectZombieJob: --- 10, [2545379]
[2025-07-24 21:03:02] 2025-07-24 21:02:27,215 | INFO     | zombie collector waiting for pid 2545379
[2025-07-24 21:03:02] 2025-07-24 21:02:27,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 21:03:02] 2025-07-24 21:02:27,215 | INFO     | collected zombie processes
[2025-07-24 21:03:02] 2025-07-24 21:02:27,215 | INFO     | will attempt to kill all subprocesses of pid=2545379
[2025-07-24 21:03:02] 2025-07-24 21:02:28,201 | INFO     | process IDs to be killed: [2545379] (in reverse order)
[2025-07-24 21:03:02] 2025-07-24 21:02:29,481 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 21:03:02] 2025-07-24 21:02:29,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 21:03:02] 2025-07-24 21:02:29,510 | INFO     | did not find any defunct processes belonging to 2545379
[2025-07-24 21:03:02] 2025-07-24 21:02:29,536 | INFO     | did not find any defunct processes belonging to 2545379
[2025-07-24 21:03:02] 2025-07-24 21:02:29,536 | INFO     | ready for new job
[2025-07-24 21:03:02] 2025-07-24 21:02:29,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 21:03:02] 2025-07-24 21:02:29,543 | INFO     | ***************************************
[2025-07-24 21:03:02] 2025-07-24 21:02:29,543 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 21:03:02] 2025-07-24 21:02:29,543 | INFO     | ***************************************
[2025-07-24 21:03:02] 2025-07-24 21:02:29,543 | INFO     | 
[2025-07-24 21:03:02] 2025-07-24 21:02:29,589 | INFO     | architecture information:
[2025-07-24 21:03:02] 2025-07-24 21:02:29,603 | INFO     | executing command: cat /etc/os-release
[2025-07-24 21:03:02] 2025-07-24 21:02:29,823 | INFO     | cat /etc/os-release:
[2025-07-24 21:03:02] NAME="CentOS Linux"
[2025-07-24 21:03:02] VERSION="7 (Core)"
[2025-07-24 21:03:02] ID="centos"
[2025-07-24 21:03:02] ID_LIKE="rhel fedora"
[2025-07-24 21:03:02] VERSION_ID="7"
[2025-07-24 21:03:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 21:03:02] ANSI_COLOR="0;31"
[2025-07-24 21:03:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 21:03:02] HOME_URL="https://www.centos.org/"
[2025-07-24 21:03:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 21:03:02] 
[2025-07-24 21:03:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 21:03:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 21:03:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 21:03:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 21:03:02] 
[2025-07-24 21:03:02] 2025-07-24 21:02:29,823 | INFO     | ***************************************
[2025-07-24 21:03:02] 2025-07-24 21:02:30,327 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-24 21:03:02] 2025-07-24 21:02:30,353 | INFO     | sufficient remaining disk space (221246390272 B)
[2025-07-24 21:03:02] 2025-07-24 21:02:30,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 21:03:02] 2025-07-24 21:02:30,354 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 21:03:02] 2025-07-24 21:02:30,354 | INFO     | update_server=False
[2025-07-24 21:03:02] 2025-07-24 21:02:30,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 21:03:02] 2025-07-24 21:02:30,355 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:03:02] 2025-07-24 21:02:30,355 | INFO     | aborting loop
[2025-07-24 21:03:02] 2025-07-24 21:02:30,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:03:02] 2025-07-24 21:02:30,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 21:03:02] 2025-07-24 21:02:31,163 | INFO     | all data control threads have been joined
[2025-07-24 21:03:02] 2025-07-24 21:02:31,351 | INFO     | all job control threads have been joined
[2025-07-24 21:03:02] 2025-07-24 21:02:31,363 | INFO     | [job] job monitor thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,367 | INFO     | [job] retrieve thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,391 | INFO     | [data] copytool_in thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,487 | INFO     | [payload] validate_post thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,511 | INFO     | all payload control threads have been joined
[2025-07-24 21:03:02] 2025-07-24 21:02:31,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,715 | INFO     | [job] queue monitor thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,863 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:31,875 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,167 | INFO     | [data] control thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,187 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,251 | INFO     | [job] validate thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,363 | INFO     | [job] control thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,515 | INFO     | [payload] control thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 21:03:02] 2025-07-24 21:02:32,751 | INFO     | [payload] failed_post thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:32,751 | INFO     | [data] copytool_out thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:36,563 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 21:03:02] 2025-07-24 21:02:37,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687467321152)>', '<ExcThread(monitor, started 139686882301696)>']
[2025-07-24 21:03:02] 2025-07-24 21:02:42,831 | INFO     | all workflow threads have been joined
[2025-07-24 21:03:02] 2025-07-24 21:02:42,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 21:03:02] 2025-07-24 21:02:42,831 | INFO     | traces error code: 0
[2025-07-24 21:03:02] 2025-07-24 21:02:42,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 21:03:02] 2025-07-24 21:02:58,799 | INFO     | PID=2456226 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 21:03:02] 2025-07-24 21:02:58,800 | INFO     | .. there are 17 such processes running
[2025-07-24 21:03:02] 2025-07-24 21:02:58,801 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 21:03:02] 2025-07-24 21:02:58,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 21:03:02] 2025-07-24 21:02:58,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 21:03:02] 2025-07-24 21:02:58,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 21:03:02] 2025-07-24 21:02:58,801 | INFO     | [monitor] control thread has ended
[2025-07-24 21:03:02] 2025-07-24 21:02:59,106 [wrapper] ==== pilot stdout END ====
[2025-07-24 21:03:02] 2025-07-24 21:02:59,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 21:03:02] 2025-07-24 21:02:59,187 [wrapper] pilotpid: 2456226
[2025-07-24 21:03:02] 2025-07-24 21:02:59,260 [wrapper] Pilot exit status: 0
[2025-07-24 21:03:02] 2025-07-24 21:02:59,495 [wrapper] pandaids: 6741741374
[2025-07-24 21:03:02] 2025-07-24 21:02:59,735 [wrapper] cleanup supervisor_pilot 3039910 2456227
[2025-07-24 21:03:02] 2025-07-24 21:02:59,819 [wrapper] Test setup, not cleaning
[2025-07-24 21:03:02] 2025-07-24 21:02:59,899 [wrapper] apfmon messages muted
[2025-07-24 21:03:02] 2025-07-24 21:02:59,963 [wrapper] ==== wrapper stdout END ====
[2025-07-24 21:03:02] 2025-07-24 21:03:00,075 [wrapper] ==== wrapper stderr END ====
[2025-07-24 21:03:02]  *** Error codes and diagnostics ***
[2025-07-24 21:03:02]     "exeErrorCode": 0,
[2025-07-24 21:03:02]     "exeErrorDiag": "",
[2025-07-24 21:03:02]     "pilotErrorCode": 0,
[2025-07-24 21:03:02]     "pilotErrorDiag": "",
[2025-07-24 21:03:02]  *** Listing of results directory ***
[2025-07-24 21:03:02] total 566880
[2025-07-24 21:03:02] -rw-r--r-- 1 boinc boinc    530466 Jul 22 04:54 pilot3.tar.gz
[2025-07-24 21:03:02] -rw-r--r-- 1 boinc boinc      5112 Jul 22 05:00 queuedata.json
[2025-07-24 21:03:02] -rwx------ 1 boinc boinc     36292 Jul 22 05:00 runpilot2-wrapper.sh
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc       100 Jul 24 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 21:03:02] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 18:13 run_atlas
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc       105 Jul 24 18:13 job.xml
[2025-07-24 21:03:02] -rw-r--r-- 2 boinc boinc 315871196 Jul 24 18:13 EVNT.45697451._000219.pool.root.1
[2025-07-24 21:03:02] -rw-r--r-- 2 boinc boinc     15095 Jul 24 18:13 start_atlas.sh
[2025-07-24 21:03:02] drwxrwx--x 2 boinc boinc      4096 Jul 24 18:13 shared
[2025-07-24 21:03:02] -rw-r--r-- 2 boinc boinc    542902 Jul 24 18:13 input.tar.gz
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc      7020 Jul 24 18:13 init_data.xml
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc         0 Jul 24 18:13 boinc_setup_complete
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc         0 Jul 24 18:13 boinc_lockfile
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc      2630 Jul 24 18:13 pandaJob.out
[2025-07-24 21:03:02] -rw------- 1 boinc boinc    979693 Jul 24 18:16 agis_schedconf.cvmfs.json
[2025-07-24 21:03:02] -rw------- 1 boinc boinc   1593052 Jul 24 18:16 agis_ddmendpoints.agis.ALL.json
[2025-07-24 21:03:02] drwx------ 4 boinc boinc      4096 Jul 24 18:16 pilot3
[2025-07-24 21:03:02] -rw------- 1 boinc boinc 258208660 Jul 24 20:59 HITS.45697453._005451.pool.root.1
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc       530 Jul 24 20:59 boinc_task_state.xml
[2025-07-24 21:03:02] -rw------- 1 boinc boinc      1024 Jul 24 21:00 memory_monitor_summary.json
[2025-07-24 21:03:02] -rw------- 1 boinc boinc    394125 Jul 24 21:00 log.45697453._005451.job.log.tgz.1
[2025-07-24 21:03:02] -rw------- 1 boinc boinc      7724 Jul 24 21:02 heartbeat.json
[2025-07-24 21:03:02] -rw------- 1 boinc boinc       823 Jul 24 21:02 pilotlog.txt
[2025-07-24 21:03:02] -rw------- 1 boinc boinc        95 Jul 24 21:02 pilot_heartbeat.json
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc      8192 Jul 24 21:02 boinc_mmap_file
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc        28 Jul 24 21:03 wrapper_checkpoint.txt
[2025-07-24 21:03:02] -rw------- 1 boinc boinc    868402 Jul 24 21:03 log.45697453._005451.job.log.1
[2025-07-24 21:03:02] -rw------- 1 boinc boinc       357 Jul 24 21:03 output.list
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc       620 Jul 24 21:03 runtime_log
[2025-07-24 21:03:02] -rw------- 1 boinc boinc   1280000 Jul 24 21:03 result.tar.gz
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc      8965 Jul 24 21:03 runtime_log.err
[2025-07-24 21:03:02] -rw------- 1 boinc boinc       655 Jul 24 21:03 gsxNDmcIKy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4UuKDm1PrWdn.diag
[2025-07-24 21:03:02] -rw-rw-r-- 1 boinc boinc     20671 Jul 24 21:03 stderr.txt
[2025-07-24 21:03:02] HITS file was successfully produced:
[2025-07-24 21:03:02] -rw------- 1 boinc boinc 258208660 Jul 24 20:59 shared/HITS.pool.root.1
[2025-07-24 21:03:02]  *** Contents of shared directory: ***
[2025-07-24 21:03:02] total 562436
[2025-07-24 21:03:02] -rw-r--r-- 2 boinc boinc 315871196 Jul 24 18:13 ATLAS.root_0
[2025-07-24 21:03:02] -rw-r--r-- 2 boinc boinc     15095 Jul 24 18:13 start_atlas.sh
[2025-07-24 21:03:02] -rw-r--r-- 2 boinc boinc    542902 Jul 24 18:13 input.tar.gz
[2025-07-24 21:03:02] -rw------- 1 boinc boinc 258208660 Jul 24 20:59 HITS.pool.root.1
[2025-07-24 21:03:02] -rw------- 1 boinc boinc   1280000 Jul 24 21:03 result.tar.gz
21:03:04 (2413476): run_atlas exited; CPU time 62952.470950
21:03:04 (2413476): called boinc_finish(0)

</stderr_txt>
]]>

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