Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:25:14 (9121): wrapper (7.7.26015): starting
01:25:14 (9121): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 01:25:14] Arguments: --nthreads 8
[2025-07-23 01:25:14] Threads: 8
[2025-07-23 01:25:14] Checking for CVMFS
[2025-07-23 01:25:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 01:25:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 01:25:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 01:25:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 01:25:17] 2.11.2.0 11919 103097 110336 148638 3 216 19014344 25165824 2653 130560 0 61974266 99.829 48027674 3667 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-23 01:25:17] CVMFS is ok
[2025-07-23 01:25:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 01:25:17] Checking for apptainer binary...
[2025-07-23 01:25:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 01:25:17] Running /usr/bin/apptainer --version
[2025-07-23 01:25:17] apptainer version 1.3.2-1.el7
[2025-07-23 01:25:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 06:11:21] cg-vwn425.simple-grid.lan
[2025-07-23 06:11:21] apptainer works
[2025-07-23 06:11:21] Set ATHENA_PROC_NUMBER=8
[2025-07-23 06:11:21] Set ATHENA_CORE_NUMBER=8
[2025-07-23 06:11:21] Starting ATLAS job with PandaID=6742061129
[2025-07-23 06:11:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 11:45:32]  *** The last 200 lines of the pilot log: ***
[2025-07-23 11:45:32] 2025-07-23 09:42:14,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 11:45:32] 2025-07-23 09:42:14,658 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 11:45:32] 2025-07-23 09:42:14,664 | INFO     | fitting pss+swap vs Time
[2025-07-23 11:45:32] 2025-07-23 09:42:14,671 | INFO     | sum of square deviations: 10256266720.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,675 | INFO     | sum of deviations: 42142472871.000015
[2025-07-23 11:45:32] 2025-07-23 09:42:14,675 | INFO     | mean x: 1753253830.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,675 | INFO     | mean y: 2527224.1183800623
[2025-07-23 11:45:32] 2025-07-23 09:42:14,675 | INFO     | -- intersect: -7201502661.597372
[2025-07-23 11:45:32] 2025-07-23 09:42:14,675 | INFO     | intersect: -7201502661.597372
[2025-07-23 11:45:32] 2025-07-23 09:42:14,676 | INFO     | chi2: 2.349945565412977
[2025-07-23 11:45:32] 2025-07-23 09:42:14,676 | INFO     | sum of square deviations: 9784425315.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,680 | INFO     | sum of deviations: 63048064721.5
[2025-07-23 11:45:32] 2025-07-23 09:42:14,680 | INFO     | mean x: 1753253677.5
[2025-07-23 11:45:32] 2025-07-23 09:42:14,680 | INFO     | mean y: 2533892.2056962023
[2025-07-23 11:45:32] 2025-07-23 09:42:14,680 | INFO     | -- intersect: -11294936094.382668
[2025-07-23 11:45:32] 2025-07-23 09:42:14,680 | INFO     | intersect: -11294936094.382668
[2025-07-23 11:45:32] 2025-07-23 09:42:14,681 | INFO     | chi2: 1.5744662788190487
[2025-07-23 11:45:32] 2025-07-23 09:42:14,681 | INFO     | current chi2=1.5744662788190487 (change=32.999882976338064 %)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,681 | INFO     | sum of square deviations: 9327281860.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,689 | INFO     | sum of deviations: 61874299579.99999
[2025-07-23 11:45:32] 2025-07-23 09:42:14,689 | INFO     | mean x: 1753253525.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,689 | INFO     | mean y: 2533500.610932476
[2025-07-23 11:45:32] 2025-07-23 09:42:14,689 | INFO     | -- intersect: -11628007473.042135
[2025-07-23 11:45:32] 2025-07-23 09:42:14,689 | INFO     | intersect: -11628007473.042135
[2025-07-23 11:45:32] 2025-07-23 09:42:14,690 | INFO     | chi2: 1.5747661870158138
[2025-07-23 11:45:32] 2025-07-23 09:42:14,690 | INFO     | current chi2=1.5747661870158138 (change=-0.019048245160901485 %)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,690 | INFO     | right removable region: 310
[2025-07-23 11:45:32] 2025-07-23 09:42:14,690 | INFO     | sum of square deviations: 9784425315.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,694 | INFO     | sum of deviations: -13779617203.999998
[2025-07-23 11:45:32] 2025-07-23 09:42:14,694 | INFO     | mean x: 1753253982.5
[2025-07-23 11:45:32] 2025-07-23 09:42:14,694 | INFO     | mean y: 2545202.930379747
[2025-07-23 11:45:32] 2025-07-23 09:42:14,694 | INFO     | -- intersect: 2471690601.097131
[2025-07-23 11:45:32] 2025-07-23 09:42:14,694 | INFO     | intersect: 2471690601.097131
[2025-07-23 11:45:32] 2025-07-23 09:42:14,695 | INFO     | chi2: 0.8444452211213394
[2025-07-23 11:45:32] 2025-07-23 09:42:14,695 | INFO     | current chi2=0.8444452211213394 (change=64.0653284250464 %)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,695 | INFO     | sum of square deviations: 9327281860.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,699 | INFO     | sum of deviations: -21809391732.00002
[2025-07-23 11:45:32] 2025-07-23 09:42:14,699 | INFO     | mean x: 1753254135.0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,699 | INFO     | mean y: 2547862.376205788
[2025-07-23 11:45:32] 2025-07-23 09:42:14,699 | INFO     | -- intersect: 4102070832.7224507
[2025-07-23 11:45:32] 2025-07-23 09:42:14,699 | INFO     | intersect: 4102070832.7224507
[2025-07-23 11:45:32] 2025-07-23 09:42:14,700 | INFO     | chi2: 0.8041357351264217
[2025-07-23 11:45:32] 2025-07-23 09:42:14,700 | INFO     | current chi2=0.8041357351264217 (change=4.773487372146022 %)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,700 | INFO     | left removable region: 20
[2025-07-23 11:45:32] 2025-07-23 09:42:14,700 | INFO     | sum of square deviations: 7562532492.5
[2025-07-23 11:45:32] 2025-07-23 09:42:14,703 | INFO     | sum of deviations: -829756159.9999975
[2025-07-23 11:45:32] 2025-07-23 09:42:14,703 | INFO     | mean x: 1753254104.5
[2025-07-23 11:45:32] 2025-07-23 09:42:14,703 | INFO     | mean y: 2555044.744827586
[2025-07-23 11:45:32] 2025-07-23 09:42:14,704 | INFO     | -- intersect: 194920947.92566
[2025-07-23 11:45:32] 2025-07-23 09:42:14,704 | INFO     | intersect: 194920947.92566
[2025-07-23 11:45:32] 2025-07-23 09:42:14,704 | INFO     | chi2: 0.015001609587216884
[2025-07-23 11:45:32] 2025-07-23 09:42:14,704 | INFO     | -- intersect: 194920947.92566
[2025-07-23 11:45:32] 2025-07-23 09:42:14,704 | INFO     | current memory leak: -0.11 B/s (using 290 data points, chi2=0.02)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,705 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,705 | INFO     | ..............................
[2025-07-23 11:45:32] 2025-07-23 09:42:14,705 | INFO     | . Timing measurements:
[2025-07-23 11:45:32] 2025-07-23 09:42:14,705 | INFO     | . get job = 0 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,705 | INFO     | . initial setup = 5 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,706 | INFO     | . payload setup = 13 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,712 | INFO     | . stage-in = 0 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,712 | INFO     | . payload execution = 19580 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,712 | INFO     | . stage-out = 3 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,712 | INFO     | . log creation = 0 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,712 | INFO     | ..............................
[2025-07-23 11:45:32] 2025-07-23 09:42:14,851 | INFO     | 
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | job summary report
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | --------------------------------------------------
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | PanDA job id: 6742061129
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | task id: 45697523
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | errors: (none)
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | pilot state: finished 
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | transexitcode: 0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | exeerrorcode: 0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,852 | INFO     | exeerrordiag: 
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | exitcode: 0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | exitmsg: OK
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | cpuconsumptiontime: 73488 s
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | nevents: 400
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | neventsw: 0
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | pid: 24626
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | pgrp: 24626
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | corecount: 8
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | event service: False
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | sizes: {0: 2397324, 1: 2397579, 10: 2397841, 12: 2397869, 19597: 2430389, 19601: 2439389, 19602: 2439573, 19695: 2439767}
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | --------------------------------------------------
[2025-07-23 11:45:32] 2025-07-23 09:42:14,853 | INFO     | 
[2025-07-23 11:45:32] 2025-07-23 09:42:14,854 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-07-23 11:45:32] 2025-07-23 09:42:15,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 11:45:32] 2025-07-23 09:42:15,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 11:45:32] 2025-07-23 09:42:15,422 | INFO     | job 6742061129 has completed (purged errors)
[2025-07-23 11:45:32] 2025-07-23 09:42:15,422 | INFO     | overall cleanup function is called
[2025-07-23 11:45:32] 2025-07-23 09:42:16,430 | INFO     | --- collectZombieJob: --- 10, [24626]
[2025-07-23 11:45:32] 2025-07-23 09:42:16,430 | INFO     | zombie collector waiting for pid 24626
[2025-07-23 11:45:32] 2025-07-23 09:42:16,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 11:45:32] 2025-07-23 09:42:16,430 | INFO     | collected zombie processes
[2025-07-23 11:45:32] 2025-07-23 09:42:16,430 | INFO     | will attempt to kill all subprocesses of pid=24626
[2025-07-23 11:45:32] 2025-07-23 09:42:16,553 | INFO     | process IDs to be killed: [24626] (in reverse order)
[2025-07-23 11:45:32] 2025-07-23 09:42:17,088 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 11:45:32] 2025-07-23 09:42:17,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 11:45:32] 2025-07-23 09:42:17,092 | INFO     | did not find any defunct processes belonging to 24626
[2025-07-23 11:45:32] 2025-07-23 09:42:17,094 | INFO     | did not find any defunct processes belonging to 24626
[2025-07-23 11:45:32] 2025-07-23 09:42:17,094 | INFO     | ready for new job
[2025-07-23 11:45:32] 2025-07-23 09:42:17,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 11:45:32] 2025-07-23 09:42:17,096 | INFO     | ***************************************
[2025-07-23 11:45:32] 2025-07-23 09:42:17,097 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 11:45:32] 2025-07-23 09:42:17,097 | INFO     | ***************************************
[2025-07-23 11:45:32] 2025-07-23 09:42:17,097 | INFO     | 
[2025-07-23 11:45:32] 2025-07-23 09:42:17,097 | INFO     | pilot is running in a VM
[2025-07-23 11:45:32] 2025-07-23 09:42:17,098 | INFO     | architecture information:
[2025-07-23 11:45:32] 2025-07-23 09:42:17,112 | INFO     | executing command: cat /etc/os-release
[2025-07-23 11:45:32] 2025-07-23 09:42:17,257 | INFO     | cat /etc/os-release:
[2025-07-23 11:45:32] NAME="CentOS Linux"
[2025-07-23 11:45:32] VERSION="7 (Core)"
[2025-07-23 11:45:32] ID="centos"
[2025-07-23 11:45:32] ID_LIKE="rhel fedora"
[2025-07-23 11:45:32] VERSION_ID="7"
[2025-07-23 11:45:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 11:45:32] ANSI_COLOR="0;31"
[2025-07-23 11:45:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 11:45:32] HOME_URL="https://www.centos.org/"
[2025-07-23 11:45:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 11:45:32] 
[2025-07-23 11:45:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 11:45:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 11:45:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 11:45:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 11:45:32] 
[2025-07-23 11:45:32] 2025-07-23 09:42:17,257 | INFO     | ***************************************
[2025-07-23 11:45:32] 2025-07-23 09:42:17,761 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-07-23 11:45:32] 2025-07-23 09:42:17,999 | INFO     | sufficient remaining disk space (496726179840 B)
[2025-07-23 11:45:32] 2025-07-23 09:42:18,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 11:45:32] 2025-07-23 09:42:18,000 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 11:45:32] 2025-07-23 09:42:18,000 | INFO     | update_server=False
[2025-07-23 11:45:32] 2025-07-23 09:42:18,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 11:45:32] 2025-07-23 09:42:18,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 11:45:32] 2025-07-23 09:42:18,182 | INFO     | all job control threads have been joined
[2025-07-23 11:45:32] 2025-07-23 09:42:18,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 11:45:32] 2025-07-23 09:42:18,610 | INFO     | aborting loop
[2025-07-23 11:45:32] 2025-07-23 09:42:18,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 11:45:32] 2025-07-23 09:42:19,006 | INFO     | [job] retrieve thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,007 | INFO     | all data control threads have been joined
[2025-07-23 11:45:32] 2025-07-23 09:42:19,134 | INFO     | [data] copytool_in thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,138 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,188 | INFO     | [job] control thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,243 | INFO     | [payload] validate_post thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,282 | INFO     | all payload control threads have been joined
[2025-07-23 11:45:32] 2025-07-23 09:42:19,458 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,616 | INFO     | [job] job monitor thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 11:45:32] 2025-07-23 09:42:19,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:19,932 | INFO     | [payload] failed_post thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:20,013 | INFO     | [data] control thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:20,251 | INFO     | [job] validate thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:20,269 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:20,288 | INFO     | [payload] control thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:20,832 | INFO     | [data] copytool_out thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:20,870 | INFO     | [job] queue monitor thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:22,010 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 11:45:32] 2025-07-23 09:42:22,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633497913152)>', '<ExcThread(monitor, started 139633044207360)>']
[2025-07-23 11:45:32] 2025-07-23 09:42:27,323 | INFO     | all workflow threads have been joined
[2025-07-23 11:45:32] 2025-07-23 09:42:27,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 11:45:32] 2025-07-23 09:42:27,323 | INFO     | traces error code: 0
[2025-07-23 11:45:32] 2025-07-23 09:42:27,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 11:45:32] 2025-07-23 09:42:47,083 | INFO     | PID=18046 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-23 11:45:32] 2025-07-23 09:42:47,084 | INFO     | .. there are 9 such processes running
[2025-07-23 11:45:32] 2025-07-23 09:42:47,084 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 11:45:32] 2025-07-23 09:42:47,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 11:45:32] 2025-07-23 09:42:47,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 11:45:32] 2025-07-23 09:42:47,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 11:45:32] 2025-07-23 09:42:47,085 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 11:45:32] 2025-07-23 09:42:47,085 | INFO     | [monitor] control thread has ended
[2025-07-23 11:45:32] 2025-07-23 09:42:47,298 [wrapper] ==== pilot stdout END ====
[2025-07-23 11:45:32] 2025-07-23 09:42:47,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 11:45:32] 2025-07-23 09:42:47,488 [wrapper] pilotpid: 18046
[2025-07-23 11:45:32] 2025-07-23 09:42:47,589 [wrapper] Pilot exit status: 0
[2025-07-23 11:45:32] 2025-07-23 09:42:47,973 [wrapper] pandaids: 6742061129
[2025-07-23 11:45:32] 2025-07-23 09:42:48,532 [wrapper] cleanup supervisor_pilot 23978 18047
[2025-07-23 11:45:32] 2025-07-23 09:42:48,584 [wrapper] Test setup, not cleaning
[2025-07-23 11:45:32] 2025-07-23 09:42:48,630 [wrapper] apfmon messages muted
[2025-07-23 11:45:32] 2025-07-23 09:42:48,715 [wrapper] ==== wrapper stdout END ====
[2025-07-23 11:45:32] 2025-07-23 09:42:48,749 [wrapper] ==== wrapper stderr END ====
[2025-07-23 11:45:32]  *** Error codes and diagnostics ***
[2025-07-23 11:45:32]     "exeErrorCode": 0,
[2025-07-23 11:45:32]     "exeErrorDiag": "",
[2025-07-23 11:45:32]     "pilotErrorCode": 0,
[2025-07-23 11:45:32]     "pilotErrorDiag": "",
[2025-07-23 11:45:32]  *** Listing of results directory ***
[2025-07-23 11:45:32] total 564172
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc    530466 Jul 22 09:08 pilot3.tar.gz
[2025-07-23 11:45:32] -rwx------. 1 boinc boinc     36292 Jul 22 09:20 runpilot2-wrapper.sh
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc      5112 Jul 22 09:20 queuedata.json
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc       100 Jul 23 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 11:45:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 01:25 run_atlas
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc       105 Jul 23 01:25 job.xml
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc      6392 Jul 23 01:25 init_data.xml
[2025-07-23 11:45:32] -rw-r--r--. 2 boinc boinc 319800809 Jul 23 01:25 EVNT.45697521._000199.pool.root.1
[2025-07-23 11:45:32] -rw-r--r--. 2 boinc boinc     15095 Jul 23 01:25 start_atlas.sh
[2025-07-23 11:45:32] drwxrwx--x. 2 boinc boinc        68 Jul 23 01:25 shared
[2025-07-23 11:45:32] -rw-r--r--. 2 boinc boinc    542904 Jul 23 01:25 input.tar.gz
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc         0 Jul 23 01:25 boinc_lockfile
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc      2633 Jul 23 06:11 pandaJob.out
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc    977736 Jul 23 06:13 agis_schedconf.cvmfs.json
[2025-07-23 11:45:32] drwx------. 4 boinc boinc      4096 Jul 23 06:13 pilot3
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc 249830002 Jul 23 11:39 HITS.45697523._004987.pool.root.1
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc       531 Jul 23 11:39 boinc_task_state.xml
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc      1018 Jul 23 11:40 memory_monitor_summary.json
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc   1593041 Jul 23 11:40 agis_ddmendpoints.agis.ALL.json
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc    419914 Jul 23 11:40 log.45697523._004987.job.log.tgz.1
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc      7773 Jul 23 11:42 heartbeat.json
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc        95 Jul 23 11:42 pilot_heartbeat.json
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc       890 Jul 23 11:42 pilotlog.txt
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc   1691666 Jul 23 11:42 log.45697523._004987.job.log.1
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc       357 Jul 23 11:42 output.list
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc       620 Jul 23 11:42 runtime_log
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc   2129920 Jul 23 11:42 result.tar.gz
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc      8674 Jul 23 11:42 runtime_log.err
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc       658 Jul 23 11:42 jfZKDmTTMy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmacuKDm8tI2Pn.diag
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc      8192 Jul 23 11:45 boinc_mmap_file
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc        28 Jul 23 11:45 wrapper_checkpoint.txt
[2025-07-23 11:45:32] -rw-r--r--. 1 boinc boinc     20573 Jul 23 11:45 stderr.txt
[2025-07-23 11:45:32] HITS file was successfully produced:
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc 249830002 Jul 23 11:39 shared/HITS.pool.root.1
[2025-07-23 11:45:32]  *** Contents of shared directory: ***
[2025-07-23 11:45:32] total 558912
[2025-07-23 11:45:32] -rw-r--r--. 2 boinc boinc 319800809 Jul 23 01:25 ATLAS.root_0
[2025-07-23 11:45:32] -rw-r--r--. 2 boinc boinc     15095 Jul 23 01:25 start_atlas.sh
[2025-07-23 11:45:32] -rw-r--r--. 2 boinc boinc    542904 Jul 23 01:25 input.tar.gz
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc 249830002 Jul 23 11:39 HITS.pool.root.1
[2025-07-23 11:45:32] -rw-------. 1 boinc boinc   2129920 Jul 23 11:42 result.tar.gz
11:45:34 (9121): run_atlas exited; CPU time 73751.699709
11:45:34 (9121): called boinc_finish(0)

</stderr_txt>
]]>

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