Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:37:53 (6479): wrapper (7.7.26015): starting
09:37:53 (6479): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 09:37:53] Arguments: --nthreads 8
[2025-07-22 09:37:53] Threads: 8
[2025-07-22 09:37:53] Checking for CVMFS
[2025-07-22 09:37:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 09:37:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 09:37:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 09:37:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 09:37:53] 2.11.2.0 11123 178050 743020 148622 3 231 16357153 18432001 4588 130560 3 757062261 99.171 1407858908 36823 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 09:37:53] CVMFS is ok
[2025-07-22 09:37:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 09:37:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 09:37:53] Further information can be found at the LHC@home message board.
[2025-07-22 09:37:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 09:37:53] Checking for apptainer binary...
[2025-07-22 09:37:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 09:37:53] Running /usr/bin/apptainer --version
[2025-07-22 09:37:53] apptainer version 1.3.2-1.el7
[2025-07-22 09:37:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 09:37:54] c-211-15.aglt2.org
[2025-07-22 09:37:54] apptainer works
[2025-07-22 09:37:54] Set ATHENA_PROC_NUMBER=8
[2025-07-22 09:37:54] Set ATHENA_CORE_NUMBER=8
[2025-07-22 09:37:54] Starting ATLAS job with PandaID=6742061149
[2025-07-22 09:37:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 12:00:00]  *** The last 200 lines of the pilot log: ***
[2025-07-22 12:00:00] 2025-07-22 15:59:24,826 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 12:00:00] 2025-07-22 15:59:27,087 | INFO     | monitor loop #637: job 0:6742061149 is in state 'finished'
[2025-07-22 12:00:00] 2025-07-22 15:59:27,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,651 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 12:00:00] 2025-07-22 15:59:28,656 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2798.9443749999978
[2025-07-22 12:00:00] 2025-07-22 15:59:28,661 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6742061149/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,661 | INFO     | extracted standard info from prmon json
[2025-07-22 12:00:00] 2025-07-22 15:59:28,661 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 12:00:00] 2025-07-22 15:59:28,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 12:00:00] 2025-07-22 15:59:28,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 12:00:00] 2025-07-22 15:59:28,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 12:00:00] 2025-07-22 15:59:28,663 | INFO     | fitting pss+swap vs Time
[2025-07-22 12:00:00] 2025-07-22 15:59:28,664 | INFO     | sum of square deviations: 832722590.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,664 | INFO     | sum of deviations: 11714886520.000002
[2025-07-22 12:00:00] 2025-07-22 15:59:28,664 | INFO     | mean x: 1753195718.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,664 | INFO     | mean y: 2536882.978417266
[2025-07-22 12:00:00] 2025-07-22 15:59:28,664 | INFO     | -- intersect: -24661726018.451847
[2025-07-22 12:00:00] 2025-07-22 15:59:28,664 | INFO     | intersect: -24661726018.451847
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | chi2: 1.2769466287047684
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | sum of square deviations: 746051197.5
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | sum of deviations: 11257862289.5
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | mean x: 1753195565.5
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | mean y: 2536084.350746269
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | -- intersect: -26453066840.89096
[2025-07-22 12:00:00] 2025-07-22 15:59:28,665 | INFO     | intersect: -26453066840.89096
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | chi2: 1.2783352974019273
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | current chi2=1.2783352974019273 (change=-0.10874915724296769 %)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | right removable region: 133
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | sum of square deviations: 746051197.5
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | sum of deviations: -6888672293.999999
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | mean x: 1753195870.5
[2025-07-22 12:00:00] 2025-07-22 15:59:28,666 | INFO     | mean y: 2569005.895522388
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | -- intersect: 16190723196.30356
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | intersect: 16190723196.30356
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | chi2: 0.012866307171826019
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | current chi2=0.012866307171826019 (change=98.99241621516504 %)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | sum of square deviations: 665612480.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | sum of deviations: -6072531395.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | mean x: 1753196023.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,667 | INFO     | mean y: 2567455.434108527
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | -- intersect: 15997366548.228527
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | intersect: 15997366548.228527
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | chi2: 0.012691908278509054
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | current chi2=0.012691908278509054 (change=1.3554696851856183 %)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | left removable region: 20
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | sum of square deviations: 447383272.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | sum of deviations: -4140869771.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | mean x: 1753196145.0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,668 | INFO     | mean y: 2563924.274336283
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | -- intersect: 16229717181.502588
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | intersect: 16229717181.502588
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | chi2: 0.011655534781579885
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | -- intersect: 16229717181.502588
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | current memory leak: -9.26 B/s (using 113 data points, chi2=0.01)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | could have reported an average CPU frequency of 2659 MHz (8 samples)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | ..............................
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | . Timing measurements:
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | . get job = 0 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | . initial setup = 2 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,669 | INFO     | . payload setup = 6 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,670 | INFO     | . stage-in = 0 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,670 | INFO     | . payload execution = 8451 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,670 | INFO     | . stage-out = 0 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,670 | INFO     | . log creation = 0 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,670 | INFO     | ..............................
[2025-07-22 12:00:00] 2025-07-22 15:59:28,724 | INFO     | 
[2025-07-22 12:00:00] 2025-07-22 15:59:28,724 | INFO     | job summary report
[2025-07-22 12:00:00] 2025-07-22 15:59:28,724 | INFO     | --------------------------------------------------
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | PanDA job id: 6742061149
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | task id: 45697523
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | errors: (none)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | pilot state: finished 
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | transexitcode: 0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | exeerrorcode: 0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | exeerrordiag: 
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | exitcode: 0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | exitmsg: OK
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | cpuconsumptiontime: 65239 s
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | nevents: 400
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | neventsw: 0
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | pid: 16742
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | pgrp: 16742
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | corecount: 8
[2025-07-22 12:00:00] 2025-07-22 15:59:28,725 | INFO     | event service: False
[2025-07-22 12:00:00] 2025-07-22 15:59:28,726 | INFO     | sizes: {0: 2396724, 1: 2397580, 5: 2397842, 12: 2397898, 8462: 2425920, 8463: 2434918, 8467: 2435102, 8470: 2435296}
[2025-07-22 12:00:00] 2025-07-22 15:59:28,726 | INFO     | --------------------------------------------------
[2025-07-22 12:00:00] 2025-07-22 15:59:28,726 | INFO     | 
[2025-07-22 12:00:00] 2025-07-22 15:59:28,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-22 12:00:00] 2025-07-22 15:59:28,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 12:00:00] 2025-07-22 15:59:28,743 | INFO     | job 6742061149 has completed (purged errors)
[2025-07-22 12:00:00] 2025-07-22 15:59:28,743 | INFO     | overall cleanup function is called
[2025-07-22 12:00:00] 2025-07-22 15:59:29,750 | INFO     | --- collectZombieJob: --- 10, [16742]
[2025-07-22 12:00:00] 2025-07-22 15:59:29,750 | INFO     | zombie collector waiting for pid 16742
[2025-07-22 12:00:00] 2025-07-22 15:59:29,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 12:00:00] 2025-07-22 15:59:29,750 | INFO     | collected zombie processes
[2025-07-22 12:00:00] 2025-07-22 15:59:29,750 | INFO     | will attempt to kill all subprocesses of pid=16742
[2025-07-22 12:00:00] 2025-07-22 15:59:29,878 | INFO     | process IDs to be killed: [16742] (in reverse order)
[2025-07-22 12:00:00] 2025-07-22 15:59:29,974 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 12:00:00] 2025-07-22 15:59:29,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 12:00:00] 2025-07-22 15:59:29,978 | INFO     | did not find any defunct processes belonging to 16742
[2025-07-22 12:00:00] 2025-07-22 15:59:29,980 | INFO     | did not find any defunct processes belonging to 16742
[2025-07-22 12:00:00] 2025-07-22 15:59:29,980 | INFO     | ready for new job
[2025-07-22 12:00:00] 2025-07-22 15:59:29,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 12:00:00] 2025-07-22 15:59:29,982 | INFO     | ***************************************
[2025-07-22 12:00:00] 2025-07-22 15:59:29,982 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 12:00:00] 2025-07-22 15:59:29,982 | INFO     | ***************************************
[2025-07-22 12:00:00] 2025-07-22 15:59:29,982 | INFO     | 
[2025-07-22 12:00:00] 2025-07-22 15:59:29,984 | INFO     | architecture information:
[2025-07-22 12:00:00] 2025-07-22 15:59:29,984 | INFO     | executing command: cat /etc/os-release
[2025-07-22 12:00:00] 2025-07-22 15:59:29,996 | INFO     | cat /etc/os-release:
[2025-07-22 12:00:00] NAME="CentOS Linux"
[2025-07-22 12:00:00] VERSION="7 (Core)"
[2025-07-22 12:00:00] ID="centos"
[2025-07-22 12:00:00] ID_LIKE="rhel fedora"
[2025-07-22 12:00:00] VERSION_ID="7"
[2025-07-22 12:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 12:00:00] ANSI_COLOR="0;31"
[2025-07-22 12:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 12:00:00] HOME_URL="https://www.centos.org/"
[2025-07-22 12:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 12:00:00] 
[2025-07-22 12:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 12:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 12:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 12:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 12:00:00] 
[2025-07-22 12:00:00] 2025-07-22 15:59:29,996 | INFO     | ***************************************
[2025-07-22 12:00:00] 2025-07-22 15:59:30,500 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-22 12:00:00] 2025-07-22 15:59:30,518 | INFO     | sufficient remaining disk space (55698259968 B)
[2025-07-22 12:00:00] 2025-07-22 15:59:30,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 12:00:00] 2025-07-22 15:59:30,518 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 12:00:00] 2025-07-22 15:59:30,518 | INFO     | update_server=False
[2025-07-22 12:00:00] 2025-07-22 15:59:30,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 12:00:00] 2025-07-22 15:59:30,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:00:00] 2025-07-22 15:59:30,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 12:00:00] 2025-07-22 15:59:30,596 | INFO     | aborting loop
[2025-07-22 12:00:00] 2025-07-22 15:59:30,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 12:00:00] 2025-07-22 15:59:31,109 | INFO     | all data control threads have been joined
[2025-07-22 12:00:00] 2025-07-22 15:59:31,524 | INFO     | [job] retrieve thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:31,524 | INFO     | [job] queue monitor thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:31,601 | INFO     | [job] job monitor thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:31,748 | INFO     | all payload control threads have been joined
[2025-07-22 12:00:00] 2025-07-22 15:59:31,773 | INFO     | [data] copytool_in thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:31,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 12:00:00] 2025-07-22 15:59:32,096 | INFO     | [payload] failed_post thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,108 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,110 | INFO     | [job] validate thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,114 | INFO     | [data] control thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,132 | INFO     | [payload] validate_post thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,203 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,214 | INFO     | all job control threads have been joined
[2025-07-22 12:00:00] 2025-07-22 15:59:32,753 | INFO     | [payload] control thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:32,816 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:33,219 | INFO     | [job] control thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:33,999 | INFO     | [data] copytool_out thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:34,791 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:41,202 | INFO     | job.realtimelogging is not enabled
[2025-07-22 12:00:00] 2025-07-22 15:59:42,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 12:00:00] 2025-07-22 15:59:42,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658239162176)>', '<ExcThread(monitor, started 140657804953344)>']
[2025-07-22 12:00:00] 2025-07-22 15:59:47,405 | INFO     | all workflow threads have been joined
[2025-07-22 12:00:00] 2025-07-22 15:59:47,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 12:00:00] 2025-07-22 15:59:47,405 | INFO     | traces error code: 0
[2025-07-22 12:00:00] 2025-07-22 15:59:47,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 12:00:00] 2025-07-22 16:00:00,569 | INFO     | PID=10125 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-22 12:00:00] 2025-07-22 16:00:00,569 | INFO     | .. there are 8 such processes running
[2025-07-22 12:00:00] 2025-07-22 16:00:00,570 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 12:00:00] 2025-07-22 16:00:00,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 12:00:00] 2025-07-22 16:00:00,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 12:00:00] 2025-07-22 16:00:00,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 12:00:00] 2025-07-22 16:00:00,570 | INFO     | [monitor] control thread has ended
[2025-07-22 12:00:00] 2025-07-22 16:00:00,648 [wrapper] ==== pilot stdout END ====
[2025-07-22 12:00:00] 2025-07-22 16:00:00,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 12:00:00] 2025-07-22 16:00:00,654 [wrapper] pilotpid: 10125
[2025-07-22 12:00:00] 2025-07-22 16:00:00,657 [wrapper] Pilot exit status: 0
[2025-07-22 12:00:00] 2025-07-22 16:00:00,668 [wrapper] pandaids: 6742061149
[2025-07-22 12:00:00] 2025-07-22 16:00:00,713 [wrapper] cleanup supervisor_pilot  1190 10126
[2025-07-22 12:00:00] 2025-07-22 16:00:00,715 [wrapper] Test setup, not cleaning
[2025-07-22 12:00:00] 2025-07-22 16:00:00,718 [wrapper] apfmon messages muted
[2025-07-22 12:00:00] 2025-07-22 16:00:00,721 [wrapper] ==== wrapper stdout END ====
[2025-07-22 12:00:00] 2025-07-22 16:00:00,723 [wrapper] ==== wrapper stderr END ====
[2025-07-22 12:00:00]  *** Error codes and diagnostics ***
[2025-07-22 12:00:00]     "exeErrorCode": 0,
[2025-07-22 12:00:00]     "exeErrorDiag": "",
[2025-07-22 12:00:00]     "pilotErrorCode": 0,
[2025-07-22 12:00:00]     "pilotErrorDiag": "",
[2025-07-22 12:00:00]  *** Listing of results directory ***
[2025-07-22 12:00:00] total 572976
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas    530466 Jul 22 03:08 pilot3.tar.gz
[2025-07-22 12:00:00] -rwx------ 1 boincer umatlas     36292 Jul 22 03:23 runpilot2-wrapper.sh
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas      5112 Jul 22 03:23 queuedata.json
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas       100 Jul 22 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 12:00:00] -rwxr-xr-x 1 boincer umatlas      7986 Jul 22 09:37 run_atlas
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas       105 Jul 22 09:37 job.xml
[2025-07-22 12:00:00] -rw-r--r-- 2 boincer umatlas 319800809 Jul 22 09:37 EVNT.45697521._000199.pool.root.1
[2025-07-22 12:00:00] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 09:37 start_atlas.sh
[2025-07-22 12:00:00] drwxrwx--x 2 boincer umatlas      4096 Jul 22 09:37 shared
[2025-07-22 12:00:00] -rw-r--r-- 2 boincer umatlas    542907 Jul 22 09:37 input.tar.gz
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas         0 Jul 22 09:37 boinc_lockfile
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas      2634 Jul 22 09:37 pandaJob.out
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas    975854 Jul 22 09:38 agis_schedconf.cvmfs.json
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas   1593031 Jul 22 09:38 agis_ddmendpoints.agis.ALL.json
[2025-07-22 12:00:00] drwx------ 4 boincer umatlas      4096 Jul 22 09:38 pilot3
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas      6131 Jul 22 11:56 init_data.xml
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas       529 Jul 22 11:58 boinc_task_state.xml
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas 260738836 Jul 22 11:58 HITS.45697523._005007.pool.root.1
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas      1049 Jul 22 11:59 memory_monitor_summary.json
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas    355751 Jul 22 11:59 log.45697523._005007.job.log.tgz.1
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas      7832 Jul 22 11:59 heartbeat.json
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas      8192 Jul 22 11:59 boinc_mmap_file
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas        27 Jul 22 11:59 wrapper_checkpoint.txt
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas       820 Jul 22 12:00 pilotlog.txt
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas        95 Jul 22 12:00 pilot_heartbeat.json
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas    803115 Jul 22 12:00 log.45697523._005007.job.log.1
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas       357 Jul 22 12:00 output.list
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas       620 Jul 22 12:00 runtime_log
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas   1177600 Jul 22 12:00 result.tar.gz
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas       657 Jul 22 12:00 tu7NDmQWMy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmcuKDmGRbZMn.diag
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas      8660 Jul 22 12:00 runtime_log.err
[2025-07-22 12:00:00] -rw-r--r-- 1 boincer umatlas     21213 Jul 22 12:00 stderr.txt
[2025-07-22 12:00:00] HITS file was successfully produced:
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas 260738836 Jul 22 11:58 shared/HITS.pool.root.1
[2025-07-22 12:00:00]  *** Contents of shared directory: ***
[2025-07-22 12:00:00] total 568640
[2025-07-22 12:00:00] -rw-r--r-- 2 boincer umatlas 319800809 Jul 22 09:37 ATLAS.root_0
[2025-07-22 12:00:00] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 09:37 start_atlas.sh
[2025-07-22 12:00:00] -rw-r--r-- 2 boincer umatlas    542907 Jul 22 09:37 input.tar.gz
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas 260738836 Jul 22 11:58 HITS.pool.root.1
[2025-07-22 12:00:00] -rw------- 1 boincer umatlas   1177600 Jul 22 12:00 result.tar.gz
12:00:02 (6479): run_atlas exited; CPU time 65377.014946
12:00:02 (6479): called boinc_finish(0)

</stderr_txt>
]]>

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