Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:47 (14009): wrapper (7.7.26015): starting
09:51:47 (14009): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 09:51:47] Arguments: --nthreads 12
[2025-07-22 09:51:47] Threads: 12
[2025-07-22 09:51:47] Checking for CVMFS
[2025-07-22 09:51:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 09:51:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 09:51:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 09:51:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 09:51:48] 2.11.2.0 2984 104839 90816 148622 0 57 12160431 20275200 1 130560 0 33826338 99.969 9598384 10751 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 09:51:48] CVMFS is ok
[2025-07-22 09:51:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 09:51:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 09:51:48] Further information can be found at the LHC@home message board.
[2025-07-22 09:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 09:51:48] Checking for apptainer binary...
[2025-07-22 09:51:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 09:51:48] Running /usr/bin/apptainer --version
[2025-07-22 09:51:48] apptainer version 1.3.2-1.el7
[2025-07-22 09:51:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 09:51:49] c-205-26.aglt2.org
[2025-07-22 09:51:49] apptainer works
[2025-07-22 09:51:49] Set ATHENA_PROC_NUMBER=12
[2025-07-22 09:51:49] Set ATHENA_CORE_NUMBER=12
[2025-07-22 09:51:49] Starting ATLAS job with PandaID=6742061145
[2025-07-22 09:51:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 11:33:27]  *** The last 200 lines of the pilot log: ***
[2025-07-22 11:33:27]  is_tar=False
[2025-07-22 11:33:27]  lfn=log.45697523._005003.job.log.tgz.1
[2025-07-22 11:33:27]  mtime=0
[2025-07-22 11:33:27]  protocol_id=None
[2025-07-22 11:33:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-22 11:33:27]  replicas=None
[2025-07-22 11:33:27]  scope=mc23_13p6TeV
[2025-07-22 11:33:27]  status=None
[2025-07-22 11:33:27]  status_code=0
[2025-07-22 11:33:27]  storage_token=
[2025-07-22 11:33:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6742061145/log.45697523._005003.job.log.tgz.1
[2025-07-22 11:33:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/d0/log.45697523._005003.job.log.tgz.1
[2025-07-22 11:33:27]  workdir=None
[2025-07-22 11:33:27] ]
[2025-07-22 11:33:27] 2025-07-22 15:32:45,985 | INFO     | transferring file log.45697523._005003.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6742061145/log.45697523._005003.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-22 11:33:27] 2025-07-22 15:32:45,985 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6742061145/log.45697523._005003.job.log.tgz.1 /tmp/boinchome/slots/0/log.45697523._005003.job
[2025-07-22 11:33:27] 2025-07-22 15:32:46,008 | INFO     | adding to output.list: log.45697523._005003.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/d0/log.45697523._005003.job.log.tg
[2025-07-22 11:33:27] 2025-07-22 15:32:46,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-22 11:33:27] 2025-07-22 15:32:46,009 | INFO     | summary of transferred files:
[2025-07-22 11:33:27] 2025-07-22 15:32:46,009 | INFO     |  -- lfn=log.45697523._005003.job.log.tgz.1, status_code=0, status=transferred
[2025-07-22 11:33:27] 2025-07-22 15:32:46,009 | INFO     | stage-out finished correctly
[2025-07-22 11:33:27] 2025-07-22 15:32:47,777 | INFO     | monitor loop #449: job 0:6742061145 is in state 'finished'
[2025-07-22 11:33:27] 2025-07-22 15:32:47,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 11:33:27] 2025-07-22 15:32:48,565 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-22 11:33:27] 2025-07-22 15:32:49,781 | INFO     | job 6742061145 has state=finished
[2025-07-22 11:33:27] 2025-07-22 15:32:49,781 | INFO     | preparing for final server update for job 6742061145 in state='finished'
[2025-07-22 11:33:27] 2025-07-22 15:32:49,782 | INFO     | this job has now completed (state=finished)
[2025-07-22 11:33:27] 2025-07-22 15:32:49,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 11:33:27] 2025-07-22 15:32:49,782 | INFO     | log transfer has been attempted: DONE
[2025-07-22 11:33:27] 2025-07-22 15:32:49,783 | INFO     | job 6742061145 has finished - writing final server update
[2025-07-22 11:33:27] 2025-07-22 15:32:49,783 | INFO     | total number of processed events: 400 (read)
[2025-07-22 11:33:27] 2025-07-22 15:32:49,784 | INFO     | executing command: lscpu
[2025-07-22 11:33:27] 2025-07-22 15:32:49,809 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 11:33:27] 2025-07-22 15:32:50,290 | INFO     | monitor loop #450: job 0:6742061145 is in state 'finished'
[2025-07-22 11:33:27] 2025-07-22 15:32:50,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 11:33:27] 2025-07-22 15:32:52,795 | INFO     | monitor loop #451: job 0:6742061145 is in state 'finished'
[2025-07-22 11:33:27] 2025-07-22 15:32:52,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,467 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-22 11:33:27] 2025-07-22 15:32:54,472 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,475 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6742061145/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,476 | INFO     | extracted standard info from prmon json
[2025-07-22 11:33:27] 2025-07-22 15:32:54,476 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 11:33:27] 2025-07-22 15:32:54,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 11:33:27] 2025-07-22 15:32:54,476 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 11:33:27] 2025-07-22 15:32:54,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 11:33:27] 2025-07-22 15:32:54,478 | INFO     | fitting pss+swap vs Time
[2025-07-22 11:33:27] 2025-07-22 15:32:54,479 | INFO     | sum of square deviations: 241429643.0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,479 | INFO     | sum of deviations: -6053316211.999999
[2025-07-22 11:33:27] 2025-07-22 15:32:54,479 | INFO     | mean x: 1753195434.5
[2025-07-22 11:33:27] 2025-07-22 15:32:54,480 | INFO     | mean y: 2790432.4782608696
[2025-07-22 11:33:27] 2025-07-22 15:32:54,480 | INFO     | -- intersect: 43960302089.252045
[2025-07-22 11:33:27] 2025-07-22 15:32:54,480 | INFO     | intersect: 43960302089.252045
[2025-07-22 11:33:27] 2025-07-22 15:32:54,480 | INFO     | chi2: 0.10865160138465618
[2025-07-22 11:33:27] 2025-07-22 15:32:54,480 | INFO     | -- intersect: 43960302089.252045
[2025-07-22 11:33:27] 2025-07-22 15:32:54,480 | INFO     | current memory leak: -25.07 B/s (using 92 data points, chi2=0.11)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | could have reported an average CPU frequency of 2123 MHz (7 samples)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | ..............................
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | . Timing measurements:
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | . get job = 0 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | . initial setup = 2 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | . payload setup = 9 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,481 | INFO     | . stage-in = 0 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,482 | INFO     | . payload execution = 6013 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,482 | INFO     | . stage-out = 0 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,482 | INFO     | . log creation = 0 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,482 | INFO     | ..............................
[2025-07-22 11:33:27] 2025-07-22 15:32:54,568 | INFO     | 
[2025-07-22 11:33:27] 2025-07-22 15:32:54,568 | INFO     | job summary report
[2025-07-22 11:33:27] 2025-07-22 15:32:54,569 | INFO     | --------------------------------------------------
[2025-07-22 11:33:27] 2025-07-22 15:32:54,569 | INFO     | PanDA job id: 6742061145
[2025-07-22 11:33:27] 2025-07-22 15:32:54,569 | INFO     | task id: 45697523
[2025-07-22 11:33:27] 2025-07-22 15:32:54,569 | INFO     | errors: (none)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | pilot state: finished 
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | transexitcode: 0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | exeerrorcode: 0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | exeerrordiag: 
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | exitcode: 0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | exitmsg: OK
[2025-07-22 11:33:27] 2025-07-22 15:32:54,570 | INFO     | cpuconsumptiontime: 65704 s
[2025-07-22 11:33:27] 2025-07-22 15:32:54,571 | INFO     | nevents: 400
[2025-07-22 11:33:27] 2025-07-22 15:32:54,571 | INFO     | neventsw: 0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,571 | INFO     | pid: 24069
[2025-07-22 11:33:27] 2025-07-22 15:32:54,571 | INFO     | pgrp: 24069
[2025-07-22 11:33:27] 2025-07-22 15:32:54,571 | INFO     | corecount: 12
[2025-07-22 11:33:27] 2025-07-22 15:32:54,571 | INFO     | event service: False
[2025-07-22 11:33:27] 2025-07-22 15:32:54,572 | INFO     | sizes: {0: 2397381, 1: 2397580, 5: 2397842, 11: 2397898, 6026: 2424635, 6027: 2433633, 6030: 2433817, 6036: 2434011}
[2025-07-22 11:33:27] 2025-07-22 15:32:54,572 | INFO     | --------------------------------------------------
[2025-07-22 11:33:27] 2025-07-22 15:32:54,572 | INFO     | 
[2025-07-22 11:33:27] 2025-07-22 15:32:54,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 11:33:27] 2025-07-22 15:32:54,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 11:33:27] 2025-07-22 15:32:54,600 | INFO     | job 6742061145 has completed (purged errors)
[2025-07-22 11:33:27] 2025-07-22 15:32:54,600 | INFO     | overall cleanup function is called
[2025-07-22 11:33:27] 2025-07-22 15:32:55,609 | INFO     | --- collectZombieJob: --- 10, [24069]
[2025-07-22 11:33:27] 2025-07-22 15:32:55,609 | INFO     | zombie collector waiting for pid 24069
[2025-07-22 11:33:27] 2025-07-22 15:32:55,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 11:33:27] 2025-07-22 15:32:55,610 | INFO     | collected zombie processes
[2025-07-22 11:33:27] 2025-07-22 15:32:55,610 | INFO     | will attempt to kill all subprocesses of pid=24069
[2025-07-22 11:33:27] 2025-07-22 15:32:55,703 | INFO     | process IDs to be killed: [24069] (in reverse order)
[2025-07-22 11:33:27] 2025-07-22 15:32:55,755 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 11:33:27] 2025-07-22 15:32:55,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 11:33:27] 2025-07-22 15:32:55,759 | INFO     | did not find any defunct processes belonging to 24069
[2025-07-22 11:33:27] 2025-07-22 15:32:55,763 | INFO     | did not find any defunct processes belonging to 24069
[2025-07-22 11:33:27] 2025-07-22 15:32:55,763 | INFO     | ready for new job
[2025-07-22 11:33:27] 2025-07-22 15:32:55,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 11:33:27] 2025-07-22 15:32:55,765 | INFO     | ***************************************
[2025-07-22 11:33:27] 2025-07-22 15:32:55,765 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 11:33:27] 2025-07-22 15:32:55,765 | INFO     | ***************************************
[2025-07-22 11:33:27] 2025-07-22 15:32:55,766 | INFO     | 
[2025-07-22 11:33:27] 2025-07-22 15:32:55,766 | INFO     | architecture information:
[2025-07-22 11:33:27] 2025-07-22 15:32:55,767 | INFO     | executing command: cat /etc/os-release
[2025-07-22 11:33:27] 2025-07-22 15:32:55,782 | INFO     | cat /etc/os-release:
[2025-07-22 11:33:27] NAME="CentOS Linux"
[2025-07-22 11:33:27] VERSION="7 (Core)"
[2025-07-22 11:33:27] ID="centos"
[2025-07-22 11:33:27] ID_LIKE="rhel fedora"
[2025-07-22 11:33:27] VERSION_ID="7"
[2025-07-22 11:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 11:33:27] ANSI_COLOR="0;31"
[2025-07-22 11:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 11:33:27] HOME_URL="https://www.centos.org/"
[2025-07-22 11:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 11:33:27] 
[2025-07-22 11:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 11:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 11:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 11:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 11:33:27] 
[2025-07-22 11:33:27] 2025-07-22 15:32:55,782 | INFO     | ***************************************
[2025-07-22 11:33:27] 2025-07-22 15:32:56,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 11:33:27] 2025-07-22 15:32:56,302 | INFO     | sufficient remaining disk space (29108469760 B)
[2025-07-22 11:33:27] 2025-07-22 15:32:56,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 11:33:27] 2025-07-22 15:32:56,303 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 11:33:27] 2025-07-22 15:32:56,303 | INFO     | update_server=False
[2025-07-22 11:33:27] 2025-07-22 15:32:56,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 11:33:27] 2025-07-22 15:32:56,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:33:27] 2025-07-22 15:32:56,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:33:27] 2025-07-22 15:32:56,313 | INFO     | aborting loop
[2025-07-22 11:33:27] 2025-07-22 15:32:56,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 11:33:27] 2025-07-22 15:32:56,765 | INFO     | all payload control threads have been joined
[2025-07-22 11:33:27] 2025-07-22 15:32:57,097 | INFO     | all data control threads have been joined
[2025-07-22 11:33:27] 2025-07-22 15:32:57,180 | INFO     | all job control threads have been joined
[2025-07-22 11:33:27] 2025-07-22 15:32:57,304 | INFO     | [job] retrieve thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,309 | INFO     | [job] queue monitor thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,318 | INFO     | [job] job monitor thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,357 | INFO     | [payload] validate_post thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,701 | INFO     | [job] validate thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,770 | INFO     | [payload] control thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,872 | INFO     | [payload] failed_post thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:57,978 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:58,074 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:58,102 | INFO     | [data] control thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:58,186 | INFO     | [job] control thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:58,445 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:58,513 | INFO     | [data] copytool_in thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:58,618 | INFO     | [data] copytool_out thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:32:59,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 11:33:27] 2025-07-22 15:33:03,167 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:33:07,191 | INFO     | job.realtimelogging is not enabled
[2025-07-22 11:33:27] 2025-07-22 15:33:08,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 11:33:27] 2025-07-22 15:33:09,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986528851776)>', '<ExcThread(monitor, started 139985718073088)>']
[2025-07-22 11:33:27] 2025-07-22 15:33:14,776 | INFO     | all workflow threads have been joined
[2025-07-22 11:33:27] 2025-07-22 15:33:14,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 11:33:27] 2025-07-22 15:33:14,776 | INFO     | traces error code: 0
[2025-07-22 11:33:27] 2025-07-22 15:33:14,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 11:33:27] 2025-07-22 15:33:26,714 | INFO     | PID=17604 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-22 11:33:27] 2025-07-22 15:33:26,715 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 11:33:27] 2025-07-22 15:33:26,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 11:33:27] 2025-07-22 15:33:26,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 11:33:27] 2025-07-22 15:33:26,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 11:33:27] 2025-07-22 15:33:26,715 | INFO     | [monitor] control thread has ended
[2025-07-22 11:33:27] 2025-07-22 15:33:26,804 [wrapper] ==== pilot stdout END ====
[2025-07-22 11:33:27] 2025-07-22 15:33:26,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 11:33:27] 2025-07-22 15:33:26,811 [wrapper] pilotpid: 17604
[2025-07-22 11:33:27] 2025-07-22 15:33:26,814 [wrapper] Pilot exit status: 0
[2025-07-22 11:33:27] 2025-07-22 15:33:26,829 [wrapper] pandaids: 6742061145
[2025-07-22 11:33:27] 2025-07-22 15:33:26,873 [wrapper] cleanup supervisor_pilot 30714 17605
[2025-07-22 11:33:27] 2025-07-22 15:33:26,877 [wrapper] Test setup, not cleaning
[2025-07-22 11:33:27] 2025-07-22 15:33:26,881 [wrapper] apfmon messages muted
[2025-07-22 11:33:27] 2025-07-22 15:33:26,885 [wrapper] ==== wrapper stdout END ====
[2025-07-22 11:33:27] 2025-07-22 15:33:26,889 [wrapper] ==== wrapper stderr END ====
[2025-07-22 11:33:27]  *** Error codes and diagnostics ***
[2025-07-22 11:33:27]     "exeErrorCode": 0,
[2025-07-22 11:33:27]     "exeErrorDiag": "",
[2025-07-22 11:33:27]     "pilotErrorCode": 0,
[2025-07-22 11:33:27]     "pilotErrorDiag": "",
[2025-07-22 11:33:27]  *** Listing of results directory ***
[2025-07-22 11:33:27] total 577932
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas    530466 Jul 22 03:08 pilot3.tar.gz
[2025-07-22 11:33:27] -rwx------ 1 boincer umatlas     36292 Jul 22 03:23 runpilot2-wrapper.sh
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas      5112 Jul 22 03:23 queuedata.json
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas       100 Jul 22 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 11:33:27] -rwxr-xr-x 1 boincer umatlas      7986 Jul 22 09:51 run_atlas
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas       105 Jul 22 09:51 job.xml
[2025-07-22 11:33:27] -rw-r--r-- 2 boincer umatlas 319800809 Jul 22 09:51 EVNT.45697521._000199.pool.root.1
[2025-07-22 11:33:27] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 09:51 start_atlas.sh
[2025-07-22 11:33:27] drwxrwx--x 2 boincer umatlas      4096 Jul 22 09:51 shared
[2025-07-22 11:33:27] -rw-r--r-- 2 boincer umatlas    542907 Jul 22 09:51 input.tar.gz
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas         0 Jul 22 09:51 boinc_lockfile
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas      2634 Jul 22 09:51 pandaJob.out
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas    975854 Jul 22 09:52 agis_schedconf.cvmfs.json
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas   1593031 Jul 22 09:52 agis_ddmendpoints.agis.ALL.json
[2025-07-22 11:33:27] drwx------ 4 boincer umatlas      4096 Jul 22 09:52 pilot3
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas      5866 Jul 22 11:27 init_data.xml
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas 266243224 Jul 22 11:32 HITS.45697523._005003.pool.root.1
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas       530 Jul 22 11:32 boinc_task_state.xml
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas      1065 Jul 22 11:32 memory_monitor_summary.json
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas    383136 Jul 22 11:32 log.45697523._005003.job.log.tgz.1
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas      7850 Jul 22 11:32 heartbeat.json
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas      8192 Jul 22 11:33 boinc_mmap_file
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas        27 Jul 22 11:33 wrapper_checkpoint.txt
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas       745 Jul 22 11:33 pilotlog.txt
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas        95 Jul 22 11:33 pilot_heartbeat.json
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas    563206 Jul 22 11:33 log.45697523._005003.job.log.1
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas       357 Jul 22 11:33 output.list
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas       620 Jul 22 11:33 runtime_log
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas    962560 Jul 22 11:33 result.tar.gz
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas      8662 Jul 22 11:33 runtime_log.err
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas       659 Jul 22 11:33 AT1NDmQWMy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmicuKDmR6ipVm.diag
[2025-07-22 11:33:27] -rw-r--r-- 1 boincer umatlas     21567 Jul 22 11:33 stderr.txt
[2025-07-22 11:33:27] HITS file was successfully produced:
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas 266243224 Jul 22 11:32 shared/HITS.pool.root.1
[2025-07-22 11:33:27]  *** Contents of shared directory: ***
[2025-07-22 11:33:27] total 573804
[2025-07-22 11:33:27] -rw-r--r-- 2 boincer umatlas 319800809 Jul 22 09:51 ATLAS.root_0
[2025-07-22 11:33:27] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 09:51 start_atlas.sh
[2025-07-22 11:33:27] -rw-r--r-- 2 boincer umatlas    542907 Jul 22 09:51 input.tar.gz
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas 266243224 Jul 22 11:32 HITS.pool.root.1
[2025-07-22 11:33:27] -rw------- 1 boincer umatlas    962560 Jul 22 11:33 result.tar.gz
11:33:28 (14009): run_atlas exited; CPU time 65665.353205
11:33:28 (14009): called boinc_finish(0)

</stderr_txt>
]]>

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