Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:13 (596469): wrapper (7.7.26015): starting
06:40:13 (596469): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 06:40:13] Arguments: --nthreads 12
[2025-07-22 06:40:13] Threads: 12
[2025-07-22 06:40:13] Checking for CVMFS
[2025-07-22 06:40:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 06:40:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 06:40:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 06:40:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 06:40:14] 2.11.5.0 7066 30019 321808 148622 1 688 45200549 45568000 21363 130560 0 167446800 99.700 145815314 27523 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 06:40:14] CVMFS is ok
[2025-07-22 06:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 06:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 06:40:14] Further information can be found at the LHC@home message board.
[2025-07-22 06:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 06:40:14] Checking for apptainer binary...
[2025-07-22 06:40:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 06:40:14] Running /usr/bin/apptainer --version
[2025-07-22 06:40:14] apptainer version 1.4.1-1.el9
[2025-07-22 06:40:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 06:40:14] wns0030.triumf.lcg
[2025-07-22 06:40:14] apptainer works
[2025-07-22 06:40:14] Set ATHENA_PROC_NUMBER=12
[2025-07-22 06:40:14] Set ATHENA_CORE_NUMBER=12
[2025-07-22 06:40:14] Starting ATLAS job with PandaID=6742216851
[2025-07-22 06:40:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 06:43:46]  *** The last 200 lines of the pilot log: ***
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | found no stored workdir sizes
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | WARNING  | wrong length of table data, x=[1753191655.0], y=[997.0] (must be same and length>=4)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | could have reported an average CPU frequency of 2014 MHz (4 samples)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | ..............................
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | . Timing measurements:
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . get job = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . initial setup = 3 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . payload setup = 7 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . stage-in = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . payload execution = 18 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . stage-out = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . log creation = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | ..............................
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742216851/pilotlog.txt
[2025-07-22 06:43:46] 2025-07-22 13:43:14,486 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 06:43:46] - Log from pilotlog.txt -
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | found no stored workdir sizes
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | WARNING  | wrong length of table data, x=[1753191655.0], y=[997.0] (must be same and length>=4)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | could have reported an average CPU frequency of 2014 MHz (4 samples)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | ..............................
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | . Timing measurements:
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . get job = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . initial setup = 3 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . payload setup = 7 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . stage-in = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . payload execution = 18 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . stage-out = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . log creation = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | ..............................
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742216851/pilotlog.txt
[2025-07-22 06:43:46] 2025-07-22 13:43:14,486 | WARNING  | 
[2025-07-22 06:43:46] [begin log extracts]
[2025-07-22 06:43:46] - Log from pilotlog.txt -
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | WARNING  | found no stored workdir sizes
[2025-07-22 06:43:46] 2025-07-22 13:43:14,469 | INFO     | will not add max space = 0 B to job metrics
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | WARNING  | wrong length of table data, x=[1753191655.0], y=[997.0] (must be same and length>=4)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | could have reported an average CPU frequency of 2014 MHz (4 samples)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | ..............................
[2025-07-22 06:43:46] 2025-07-22 13:43:14,470 | INFO     | . Timing measurements:
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . get job = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . initial setup = 3 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . payload setup = 7 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . stage-in = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . payload execution = 18 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . stage-out = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | . log creation = 0 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | ..............................
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 06:43:46] 2025-07-22 13:43:14,471 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6742216851/pilotlog.txt
[2025-07-22 06:43:46] [end log extracts]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,487 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,488 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 06:43:46] 2025-07-22 13:43:14,563 | INFO     | 
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | job summary report
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | --------------------------------------------------
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | PanDA job id: 6742216851
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | task id: 45697523
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 06:41:04,750 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | pilot state: failed 
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | transexitcode: 65
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | exeerrorcode: 65
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | exitcode: 65
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | cpuconsumptiontime: 23 s
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | nevents: 0
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | neventsw: 0
[2025-07-22 06:43:46] 2025-07-22 13:43:14,564 | INFO     | pid: 607492
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | pgrp: 607492
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | corecount: 12
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | event service: False
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | sizes: {0: 2397450, 6: 2397712, 11: 2397740, 29: 2421121, 30: 2425413, 31: 2425441, 152: 2425735}
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | --------------------------------------------------
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | 
[2025-07-22 06:43:46] 2025-07-22 13:43:14,565 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 06:43:46] 2025-07-22 13:43:14,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 06:43:46] 2025-07-22 13:43:14,590 | INFO     | job 6742216851 has completed (purged errors)
[2025-07-22 06:43:46] 2025-07-22 13:43:14,591 | INFO     | overall cleanup function is called
[2025-07-22 06:43:46] 2025-07-22 13:43:15,594 | INFO     | --- collectZombieJob: --- 10, [607492]
[2025-07-22 06:43:46] 2025-07-22 13:43:15,595 | INFO     | zombie collector waiting for pid 607492
[2025-07-22 06:43:46] 2025-07-22 13:43:15,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 06:43:46] 2025-07-22 13:43:15,595 | INFO     | collected zombie processes
[2025-07-22 06:43:46] 2025-07-22 13:43:15,595 | INFO     | will attempt to kill all subprocesses of pid=607492
[2025-07-22 06:43:46] 2025-07-22 13:43:15,858 | INFO     | process IDs to be killed: [607492] (in reverse order)
[2025-07-22 06:43:46] 2025-07-22 13:43:15,968 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 06:43:46] 2025-07-22 13:43:15,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 06:43:46] 2025-07-22 13:43:15,979 | INFO     | did not find any defunct processes belonging to 607492
[2025-07-22 06:43:46] 2025-07-22 13:43:15,989 | INFO     | did not find any defunct processes belonging to 607492
[2025-07-22 06:43:46] 2025-07-22 13:43:15,989 | INFO     | ready for new job
[2025-07-22 06:43:46] 2025-07-22 13:43:15,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 06:43:46] 2025-07-22 13:43:15,991 | INFO     | ***************************************
[2025-07-22 06:43:46] 2025-07-22 13:43:15,991 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 06:43:46] 2025-07-22 13:43:15,991 | INFO     | ***************************************
[2025-07-22 06:43:46] 2025-07-22 13:43:15,991 | INFO     | 
[2025-07-22 06:43:46] 2025-07-22 13:43:15,993 | INFO     | architecture information:
[2025-07-22 06:43:46] 2025-07-22 13:43:15,994 | INFO     | executing command: cat /etc/os-release
[2025-07-22 06:43:46] 2025-07-22 13:43:16,012 | INFO     | cat /etc/os-release:
[2025-07-22 06:43:46] NAME="CentOS Linux"
[2025-07-22 06:43:46] VERSION="7 (Core)"
[2025-07-22 06:43:46] ID="centos"
[2025-07-22 06:43:46] ID_LIKE="rhel fedora"
[2025-07-22 06:43:46] VERSION_ID="7"
[2025-07-22 06:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 06:43:46] ANSI_COLOR="0;31"
[2025-07-22 06:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 06:43:46] HOME_URL="https://www.centos.org/"
[2025-07-22 06:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 06:43:46] 
[2025-07-22 06:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 06:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 06:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 06:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 06:43:46] 
[2025-07-22 06:43:46] 2025-07-22 13:43:16,012 | INFO     | ***************************************
[2025-07-22 06:43:46] 2025-07-22 13:43:16,515 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 06:43:46] 2025-07-22 13:43:16,532 | INFO     | sufficient remaining disk space (1434122715136 B)
[2025-07-22 06:43:46] 2025-07-22 13:43:16,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | INFO     | update_server=False
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 06:43:46] 2025-07-22 13:43:16,533 | INFO     | aborting loop
[2025-07-22 06:43:46] 2025-07-22 13:43:16,601 | INFO     | all payload control threads have been joined
[2025-07-22 06:43:46] 2025-07-22 13:43:16,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 06:43:46] 2025-07-22 13:43:17,140 | INFO     | all job control threads have been joined
[2025-07-22 06:43:46] 2025-07-22 13:43:17,534 | INFO     | [job] retrieve thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,534 | INFO     | [job] queue monitor thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,538 | INFO     | [job] job monitor thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,607 | INFO     | [payload] control thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,608 | INFO     | all data control threads have been joined
[2025-07-22 06:43:46] 2025-07-22 13:43:17,613 | INFO     | [data] copytool_in thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,681 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,731 | INFO     | [job] validate thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:17,924 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:18,078 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:18,098 | INFO     | [payload] failed_post thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:18,146 | INFO     | [job] control thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:18,540 | INFO     | [data] copytool_out thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:18,613 | INFO     | [data] control thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:18,734 | INFO     | [payload] validate_post thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:20,884 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 06:43:46] 2025-07-22 13:43:22,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202569037632)>', '<ExcThread(monitor, started 140202240608000)>']
[2025-07-22 06:43:46] 2025-07-22 13:43:28,001 | INFO     | all workflow threads have been joined
[2025-07-22 06:43:46] 2025-07-22 13:43:28,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 06:43:46] 2025-07-22 13:43:28,002 | INFO     | traces error code: 0
[2025-07-22 06:43:46] 2025-07-22 13:43:28,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 06:43:46] 2025-07-22 13:43:46,471 | INFO     | PID=601121 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 06:43:46] 2025-07-22 13:43:46,471 | INFO     | .. there are 33 such processes running
[2025-07-22 06:43:46] 2025-07-22 13:43:46,472 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 06:43:46] 2025-07-22 13:43:46,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 06:43:46] 2025-07-22 13:43:46,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 06:43:46] 2025-07-22 13:43:46,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 06:43:46] 2025-07-22 13:43:46,472 | CRITICAL | thread 'MainThread' is not alive
[2025-07-22 06:43:46] 2025-07-22 13:43:46,473 | INFO     | [monitor] control thread has ended
[2025-07-22 06:43:46] 2025-07-22 13:43:46,643 [wrapper] ==== pilot stdout END ====
[2025-07-22 06:43:46] 2025-07-22 13:43:46,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 06:43:46] 2025-07-22 13:43:46,653 [wrapper] pilotpid: 601121
[2025-07-22 06:43:46] 2025-07-22 13:43:46,657 [wrapper] Pilot exit status: 0
[2025-07-22 06:43:46] 2025-07-22 13:43:46,670 [wrapper] pandaids: 6742216851
[2025-07-22 06:43:46] 2025-07-22 13:43:46,732 [wrapper] cleanup supervisor_pilot  601127 601122
[2025-07-22 06:43:46] 2025-07-22 13:43:46,737 [wrapper] Test setup, not cleaning
[2025-07-22 06:43:46] 2025-07-22 13:43:46,742 [wrapper] apfmon messages muted
[2025-07-22 06:43:46] 2025-07-22 13:43:46,746 [wrapper] ==== wrapper stdout END ====
[2025-07-22 06:43:46] 2025-07-22 13:43:46,750 [wrapper] ==== wrapper stderr END ====
[2025-07-22 06:43:46]  *** Error codes and diagnostics ***
[2025-07-22 06:43:46]     "exeErrorCode": 65,
[2025-07-22 06:43:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 06:43:46]     "pilotErrorCode": 1305,
[2025-07-22 06:43:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 06:43:46]  *** Listing of results directory ***
[2025-07-22 06:43:46] total 312920
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc    530466 Jul 22 03:20 pilot3.tar.gz
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc      5112 Jul 22 03:25 queuedata.json
[2025-07-22 06:43:46] -rwx------. 1 boinc boinc     36292 Jul 22 03:27 runpilot2-wrapper.sh
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc       100 Jul 22 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 06:43:46] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 06:40 run_atlas
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc       105 Jul 22 06:40 job.xml
[2025-07-22 06:43:46] -rw-r--r--. 2 boinc boinc 316364390 Jul 22 06:40 EVNT.45697521._000124.pool.root.1
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc      6592 Jul 22 06:40 init_data.xml
[2025-07-22 06:43:46] -rw-r--r--. 2 boinc boinc     15095 Jul 22 06:40 start_atlas.sh
[2025-07-22 06:43:46] drwxrwx--x. 2 boinc boinc      4096 Jul 22 06:40 shared
[2025-07-22 06:43:46] -rw-r--r--. 2 boinc boinc    542912 Jul 22 06:40 input.tar.gz
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc         0 Jul 22 06:40 boinc_lockfile
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc      2635 Jul 22 06:40 pandaJob.out
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc    975854 Jul 22 06:40 agis_schedconf.cvmfs.json
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc   1593031 Jul 22 06:40 agis_ddmendpoints.agis.ALL.json
[2025-07-22 06:43:46] drwx------. 4 boinc boinc      4096 Jul 22 06:40 pilot3
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc       524 Jul 22 06:41 boinc_task_state.xml
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc       952 Jul 22 06:41 memory_monitor_summary.json
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc     20993 Jul 22 06:41 log.45697523._005291.job.log.tgz.1
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc      8394 Jul 22 06:43 heartbeat.json
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc        23 Jul 22 06:43 wrapper_checkpoint.txt
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc        95 Jul 22 06:43 pilot_heartbeat.json
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc       892 Jul 22 06:43 pilotlog.txt
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc     75573 Jul 22 06:43 log.45697523._005291.job.log.1
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc      8192 Jul 22 06:43 boinc_mmap_file
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc       188 Jul 22 06:43 output.list
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc       620 Jul 22 06:43 runtime_log
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc    112640 Jul 22 06:43 result.tar.gz
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc       644 Jul 22 06:43 kIfMDmlOPy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd7ILDm9xWhXm.diag
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc      8485 Jul 22 06:43 runtime_log.err
[2025-07-22 06:43:46] -rw-r--r--. 1 boinc boinc     21617 Jul 22 06:43 stderr.txt
[2025-07-22 06:43:46] No HITS result produced
[2025-07-22 06:43:46]  *** Contents of shared directory: ***
[2025-07-22 06:43:46] total 309616
[2025-07-22 06:43:46] -rw-r--r--. 2 boinc boinc 316364390 Jul 22 06:40 ATLAS.root_0
[2025-07-22 06:43:46] -rw-r--r--. 2 boinc boinc     15095 Jul 22 06:40 start_atlas.sh
[2025-07-22 06:43:46] -rw-r--r--. 2 boinc boinc    542912 Jul 22 06:40 input.tar.gz
[2025-07-22 06:43:46] -rw-------. 1 boinc boinc    112640 Jul 22 06:43 result.tar.gz
06:43:48 (596469): run_atlas exited; CPU time 27.535046
06:43:48 (596469): called boinc_finish(0)

</stderr_txt>
]]>

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