Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:09:41 (178690): wrapper (7.7.26015): starting
06:09:41 (178690): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 06:09:41] Arguments: --nthreads 12
[2025-07-22 06:09:41] Threads: 12
[2025-07-22 06:09:41] Checking for CVMFS
[2025-07-22 06:09:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 06:09:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 06:09:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 06:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 06:09:42] 2.11.5.0 6825 29988 310148 148621 3 430 27706338 45568000 21459 130560 0 198768463 99.724 154301099 21985 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 06:09:42] CVMFS is ok
[2025-07-22 06:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 06:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 06:09:42] Further information can be found at the LHC@home message board.
[2025-07-22 06:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 06:09:42] Checking for apptainer binary...
[2025-07-22 06:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 06:09:42] Running /usr/bin/apptainer --version
[2025-07-22 06:09:42] apptainer version 1.4.1-1.el9
[2025-07-22 06:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 06:09:42] wns0025.triumf.lcg
[2025-07-22 06:09:42] apptainer works
[2025-07-22 06:09:42] Set ATHENA_PROC_NUMBER=12
[2025-07-22 06:09:42] Set ATHENA_CORE_NUMBER=12
[2025-07-22 06:09:42] Starting ATLAS job with PandaID=6741946203
[2025-07-22 06:09:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 06:15:00]  *** The last 200 lines of the pilot log: ***
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | WARNING  | wrong length of table data, x=[1753189890.0], y=[1257.0] (must be same and length>=4)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | could have reported an average CPU frequency of 2631 MHz (4 samples)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | ..............................
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . Timing measurements:
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . get job = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . initial setup = 4 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . payload setup = 24 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . stage-in = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . payload execution = 61 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . stage-out = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . log creation = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | ..............................
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741946203/pilotlog.txt
[2025-07-22 06:15:00] 2025-07-22 13:14:26,914 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 06:15:00] - Log from pilotlog.txt -
[2025-07-22 06:15:00] 2025-07-22 13:14:26,891 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741946203/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | INFO     | extracted standard info from prmon json
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | WARNING  | wrong length of table data, x=[1753189890.0], y=[1257.0] (must be same and length>=4)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | could have reported an average CPU frequency of 2631 MHz (4 samples)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | ..............................
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . Timing measurements:
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . get job = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . initial setup = 4 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . payload setup = 24 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . stage-in = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . payload execution = 61 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . stage-out = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . log creation = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | ..............................
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741946203/pilotlog.txt
[2025-07-22 06:15:00] 2025-07-22 13:14:26,914 | WARNING  | 
[2025-07-22 06:15:00] [begin log extracts]
[2025-07-22 06:15:00] - Log from pilotlog.txt -
[2025-07-22 06:15:00] 2025-07-22 13:14:26,891 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741946203/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | INFO     | extracted standard info from prmon json
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 06:15:00] 2025-07-22 13:14:26,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | WARNING  | wrong length of table data, x=[1753189890.0], y=[1257.0] (must be same and length>=4)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | could have reported an average CPU frequency of 2631 MHz (4 samples)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | ..............................
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . Timing measurements:
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . get job = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . initial setup = 4 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . payload setup = 24 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . stage-in = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . payload execution = 61 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . stage-out = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,893 | INFO     | . log creation = 0 s
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | ..............................
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 06:15:00] 2025-07-22 13:14:26,894 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741946203/pilotlog.txt
[2025-07-22 06:15:00] [end log extracts]
[2025-07-22 06:15:00] 2025-07-22 13:14:26,915 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 06:15:00] 2025-07-22 13:14:26,917 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | 
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | job summary report
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | --------------------------------------------------
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | PanDA job id: 6741946203
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | task id: 45697523
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 06:12:07,242 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | pilot state: failed 
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | transexitcode: 65
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | exeerrorcode: 65
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | exitcode: 65
[2025-07-22 06:15:00] 2025-07-22 13:14:27,050 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | cpuconsumptiontime: 18 s
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | nevents: 0
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | neventsw: 0
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | pid: 201448
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | pgrp: 201448
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | corecount: 12
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | event service: False
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | sizes: {0: 2397322, 1: 2397577, 12: 2397577, 14: 2397867, 23: 2397895, 89: 2425584, 93: 2425584, 220: 2425750}
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | --------------------------------------------------
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | 
[2025-07-22 06:15:00] 2025-07-22 13:14:27,051 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | job 6741946203 has completed (purged errors)
[2025-07-22 06:15:00] 2025-07-22 13:14:27,262 | INFO     | overall cleanup function is called
[2025-07-22 06:15:00] 2025-07-22 13:14:28,268 | INFO     | --- collectZombieJob: --- 10, [201448]
[2025-07-22 06:15:00] 2025-07-22 13:14:28,269 | INFO     | zombie collector waiting for pid 201448
[2025-07-22 06:15:00] 2025-07-22 13:14:28,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 06:15:00] 2025-07-22 13:14:28,269 | INFO     | collected zombie processes
[2025-07-22 06:15:00] 2025-07-22 13:14:28,269 | INFO     | will attempt to kill all subprocesses of pid=201448
[2025-07-22 06:15:00] 2025-07-22 13:14:28,587 | INFO     | process IDs to be killed: [201448] (in reverse order)
[2025-07-22 06:15:00] 2025-07-22 13:14:28,731 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 06:15:00] 2025-07-22 13:14:28,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 06:15:00] 2025-07-22 13:14:28,749 | INFO     | did not find any defunct processes belonging to 201448
[2025-07-22 06:15:00] 2025-07-22 13:14:28,760 | INFO     | did not find any defunct processes belonging to 201448
[2025-07-22 06:15:00] 2025-07-22 13:14:28,760 | INFO     | ready for new job
[2025-07-22 06:15:00] 2025-07-22 13:14:28,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 06:15:00] 2025-07-22 13:14:28,764 | INFO     | ***************************************
[2025-07-22 06:15:00] 2025-07-22 13:14:28,764 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 06:15:00] 2025-07-22 13:14:28,764 | INFO     | ***************************************
[2025-07-22 06:15:00] 2025-07-22 13:14:28,764 | INFO     | 
[2025-07-22 06:15:00] 2025-07-22 13:14:28,766 | INFO     | architecture information:
[2025-07-22 06:15:00] 2025-07-22 13:14:28,766 | INFO     | executing command: cat /etc/os-release
[2025-07-22 06:15:00] 2025-07-22 13:14:28,782 | INFO     | cat /etc/os-release:
[2025-07-22 06:15:00] NAME="CentOS Linux"
[2025-07-22 06:15:00] VERSION="7 (Core)"
[2025-07-22 06:15:00] ID="centos"
[2025-07-22 06:15:00] ID_LIKE="rhel fedora"
[2025-07-22 06:15:00] VERSION_ID="7"
[2025-07-22 06:15:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 06:15:00] ANSI_COLOR="0;31"
[2025-07-22 06:15:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 06:15:00] HOME_URL="https://www.centos.org/"
[2025-07-22 06:15:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 06:15:00] 
[2025-07-22 06:15:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 06:15:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 06:15:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 06:15:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 06:15:00] 
[2025-07-22 06:15:00] 2025-07-22 13:14:28,782 | INFO     | ***************************************
[2025-07-22 06:15:00] 2025-07-22 13:14:29,286 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 06:15:00] 2025-07-22 13:14:29,299 | INFO     | sufficient remaining disk space (1284288544768 B)
[2025-07-22 06:15:00] 2025-07-22 13:14:29,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 06:15:00] 2025-07-22 13:14:29,300 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 06:15:00] 2025-07-22 13:14:29,300 | INFO     | update_server=False
[2025-07-22 06:15:00] 2025-07-22 13:14:29,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 06:15:00] 2025-07-22 13:14:29,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 06:15:00] 2025-07-22 13:14:29,300 | INFO     | aborting loop
[2025-07-22 06:15:00] 2025-07-22 13:14:29,556 | INFO     | all data control threads have been joined
[2025-07-22 06:15:00] 2025-07-22 13:14:29,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 06:15:00] 2025-07-22 13:14:30,004 | INFO     | all job control threads have been joined
[2025-07-22 06:15:00] 2025-07-22 13:14:30,306 | INFO     | [job] retrieve thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,309 | INFO     | [job] job monitor thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,421 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,425 | INFO     | [job] validate thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,562 | INFO     | [data] control thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,669 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,719 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,729 | INFO     | [payload] validate_post thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:30,804 | INFO     | all payload control threads have been joined
[2025-07-22 06:15:00] 2025-07-22 13:14:31,010 | INFO     | [job] control thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:31,684 | INFO     | [data] copytool_in thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:31,694 | INFO     | [data] copytool_out thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:31,810 | INFO     | [payload] control thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:31,828 | INFO     | [payload] failed_post thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:32,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 06:15:00] 2025-07-22 13:14:32,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 06:15:00] 2025-07-22 13:14:33,072 | INFO     | [job] queue monitor thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:36,145 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 06:15:00] 2025-07-22 13:14:37,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683141429056)>', '<ExcThread(monitor, started 140682744272640)>']
[2025-07-22 06:15:00] 2025-07-22 13:14:42,996 | INFO     | all workflow threads have been joined
[2025-07-22 06:15:00] 2025-07-22 13:14:42,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 06:15:00] 2025-07-22 13:14:42,997 | INFO     | traces error code: 0
[2025-07-22 06:15:00] 2025-07-22 13:14:42,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 06:15:00] 2025-07-22 13:15:00,123 | INFO     | PID=194218 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 06:15:00] 2025-07-22 13:15:00,123 | INFO     | .. there are 42 such processes running
[2025-07-22 06:15:00] 2025-07-22 13:15:00,123 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 06:15:00] 2025-07-22 13:15:00,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 06:15:00] 2025-07-22 13:15:00,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 06:15:00] 2025-07-22 13:15:00,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 06:15:00] 2025-07-22 13:15:00,124 | INFO     | [monitor] control thread has ended
[2025-07-22 06:15:00] 2025-07-22 13:15:00,263 [wrapper] ==== pilot stdout END ====
[2025-07-22 06:15:00] 2025-07-22 13:15:00,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 06:15:00] 2025-07-22 13:15:00,294 [wrapper] pilotpid: 194218
[2025-07-22 06:15:00] 2025-07-22 13:15:00,307 [wrapper] Pilot exit status: 0
[2025-07-22 06:15:00] 2025-07-22 13:15:00,368 [wrapper] pandaids: 6741946203
[2025-07-22 06:15:00] 2025-07-22 13:15:00,496 [wrapper] cleanup supervisor_pilot  194230 194219
[2025-07-22 06:15:00] 2025-07-22 13:15:00,504 [wrapper] Test setup, not cleaning
[2025-07-22 06:15:00] 2025-07-22 13:15:00,534 [wrapper] apfmon messages muted
[2025-07-22 06:15:00] 2025-07-22 13:15:00,540 [wrapper] ==== wrapper stdout END ====
[2025-07-22 06:15:00] 2025-07-22 13:15:00,556 [wrapper] ==== wrapper stderr END ====
[2025-07-22 06:15:00]  *** Error codes and diagnostics ***
[2025-07-22 06:15:00]     "exeErrorCode": 65,
[2025-07-22 06:15:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 06:15:00]     "pilotErrorCode": 1305,
[2025-07-22 06:15:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 06:15:00]  *** Listing of results directory ***
[2025-07-22 06:15:00] total 313112
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc    530466 Jul 21 20:01 pilot3.tar.gz
[2025-07-22 06:15:00] -rwx------. 1 boinc boinc     36292 Jul 21 20:08 runpilot2-wrapper.sh
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc      5112 Jul 21 20:08 queuedata.json
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc       100 Jul 22 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 06:15:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 06:09 run_atlas
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc       105 Jul 22 06:09 job.xml
[2025-07-22 06:15:00] -rw-r--r--. 2 boinc boinc 316548362 Jul 22 06:09 EVNT.45697521._000180.pool.root.1
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc      6596 Jul 22 06:09 init_data.xml
[2025-07-22 06:15:00] drwxrwx--x. 2 boinc boinc      4096 Jul 22 06:09 shared
[2025-07-22 06:15:00] -rw-r--r--. 2 boinc boinc    542908 Jul 22 06:09 input.tar.gz
[2025-07-22 06:15:00] -rw-r--r--. 2 boinc boinc     15095 Jul 22 06:09 start_atlas.sh
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc         0 Jul 22 06:09 boinc_lockfile
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc      2634 Jul 22 06:09 pandaJob.out
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc    976654 Jul 22 06:10 agis_schedconf.cvmfs.json
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc   1593031 Jul 22 06:10 agis_ddmendpoints.agis.ALL.json
[2025-07-22 06:15:00] drwx------. 4 boinc boinc      4096 Jul 22 06:10 pilot3
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc       523 Jul 22 06:12 boinc_task_state.xml
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc       960 Jul 22 06:12 memory_monitor_summary.json
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc     21579 Jul 22 06:12 log.45697523._004525.job.log.tgz.1
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc        95 Jul 22 06:14 pilot_heartbeat.json
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc      8407 Jul 22 06:14 heartbeat.json
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc      8192 Jul 22 06:14 boinc_mmap_file
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc        22 Jul 22 06:14 wrapper_checkpoint.txt
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc       822 Jul 22 06:15 pilotlog.txt
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc     81365 Jul 22 06:15 log.45697523._004525.job.log.1
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc       188 Jul 22 06:15 output.list
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc       620 Jul 22 06:15 runtime_log
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc    122880 Jul 22 06:15 result.tar.gz
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc      8485 Jul 22 06:15 runtime_log.err
[2025-07-22 06:15:00] -rw-------. 1 boinc boinc       646 Jul 22 06:15 rmoKDmaXIy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJAILDmjJcdCo.diag
[2025-07-22 06:15:00] -rw-r--r--. 1 boinc boinc     21792 Jul 22 06:15 stderr.txt
[2025-07-22 06:15:01] No HITS result produced
[2025-07-22 06:15:01]  *** Contents of shared directory: ***
[2025-07-22 06:15:01] total 309804
[2025-07-22 06:15:01] -rw-r--r--. 2 boinc boinc 316548362 Jul 22 06:09 ATLAS.root_0
[2025-07-22 06:15:01] -rw-r--r--. 2 boinc boinc    542908 Jul 22 06:09 input.tar.gz
[2025-07-22 06:15:01] -rw-r--r--. 2 boinc boinc     15095 Jul 22 06:09 start_atlas.sh
[2025-07-22 06:15:01] -rw-------. 1 boinc boinc    122880 Jul 22 06:15 result.tar.gz
06:15:02 (178690): run_atlas exited; CPU time 27.632814
06:15:02 (178690): called boinc_finish(0)

</stderr_txt>
]]>

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