Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:17 (1026967): wrapper (7.7.26015): starting
08:37:17 (1026967): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 08:37:17] Arguments: --nthreads 8
[2025-07-22 08:37:17] Threads: 8
[2025-07-22 08:37:17] Checking for CVMFS
[2025-07-22 08:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 08:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 08:37:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 08:37:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 08:37:17] 2.13.0.0 2191370 11189 306516 148621 0 436 19465483 32935936 23204 16776704 0 54826094 99.475 98682822 17932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-22 08:37:17] CVMFS is ok
[2025-07-22 08:37:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 08:37:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 08:37:17] Further information can be found at the LHC@home message board.
[2025-07-22 08:37:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 08:37:17] Checking for apptainer binary...
[2025-07-22 08:37:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 08:37:17] Running /usr/bin/apptainer --version
[2025-07-22 08:37:17] apptainer version 1.4.1-1.el9
[2025-07-22 08:37:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 08:37:18] c7-2-14.aglt2.org
[2025-07-22 08:37:18] apptainer works
[2025-07-22 08:37:18] Set ATHENA_PROC_NUMBER=8
[2025-07-22 08:37:18] Set ATHENA_CORE_NUMBER=8
[2025-07-22 08:37:18] Starting ATLAS job with PandaID=6741759376
[2025-07-22 08:37:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 11:45:06]  *** The last 200 lines of the pilot log: ***
[2025-07-22 11:45:06] 2025-07-22 15:44:29,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 11:45:06] 2025-07-22 15:44:29,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 11:45:06] 2025-07-22 15:44:29,798 | INFO     | fitting pss+swap vs Time
[2025-07-22 11:45:06] 2025-07-22 15:44:29,799 | INFO     | sum of square deviations: 1900277253.6502724
[2025-07-22 11:45:06] 2025-07-22 15:44:29,800 | INFO     | sum of deviations: 6616076504.502737
[2025-07-22 11:45:06] 2025-07-22 15:44:29,800 | INFO     | mean x: 1753193480.043716
[2025-07-22 11:45:06] 2025-07-22 15:44:29,800 | INFO     | mean y: 2210318.43715847
[2025-07-22 11:45:06] 2025-07-22 15:44:29,800 | INFO     | -- intersect: -6101773807.50205
[2025-07-22 11:45:06] 2025-07-22 15:44:29,800 | INFO     | intersect: -6101773807.50205
[2025-07-22 11:45:06] 2025-07-22 15:44:29,800 | INFO     | chi2: 2.661929154295926
[2025-07-22 11:45:06] 2025-07-22 15:44:29,801 | INFO     | sum of square deviations: 1748732666.1404538
[2025-07-22 11:45:06] 2025-07-22 15:44:29,806 | INFO     | sum of deviations: 18910619260.02248
[2025-07-22 11:45:06] 2025-07-22 15:44:29,806 | INFO     | mean x: 1753193327.5449438
[2025-07-22 11:45:06] 2025-07-22 15:44:29,806 | INFO     | mean y: 2222463.2471910114
[2025-07-22 11:45:06] 2025-07-22 15:44:29,806 | INFO     | -- intersect: -18956633940.79477
[2025-07-22 11:45:06] 2025-07-22 15:44:29,806 | INFO     | intersect: -18956633940.79477
[2025-07-22 11:45:06] 2025-07-22 15:44:29,806 | INFO     | chi2: 1.8796212849708596
[2025-07-22 11:45:06] 2025-07-22 15:44:29,807 | INFO     | current chi2=1.8796212849708596 (change=29.388756198208625 %)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,807 | INFO     | sum of square deviations: 1605467303.630056
[2025-07-22 11:45:06] 2025-07-22 15:44:29,808 | INFO     | sum of deviations: 18868681620.728325
[2025-07-22 11:45:06] 2025-07-22 15:44:29,808 | INFO     | mean x: 1753193175.0462427
[2025-07-22 11:45:06] 2025-07-22 15:44:29,808 | INFO     | mean y: 2222419.6589595377
[2025-07-22 11:45:06] 2025-07-22 15:44:29,808 | INFO     | -- intersect: -20602646807.378273
[2025-07-22 11:45:06] 2025-07-22 15:44:29,808 | INFO     | intersect: -20602646807.378273
[2025-07-22 11:45:06] 2025-07-22 15:44:29,809 | INFO     | chi2: 1.880010336861409
[2025-07-22 11:45:06] 2025-07-22 15:44:29,809 | INFO     | current chi2=1.880010336861409 (change=-0.02069841907304307 %)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,809 | INFO     | right removable region: 172
[2025-07-22 11:45:06] 2025-07-22 15:44:29,809 | INFO     | sum of square deviations: 1748727786.1404538
[2025-07-22 11:45:06] 2025-07-22 15:44:29,810 | INFO     | sum of deviations: -24089028925.269653
[2025-07-22 11:45:06] 2025-07-22 15:44:29,810 | INFO     | mean x: 1753193632.5449438
[2025-07-22 11:45:06] 2025-07-22 15:44:29,810 | INFO     | mean y: 2240964.033707865
[2025-07-22 11:45:06] 2025-07-22 15:44:29,810 | INFO     | -- intersect: 24152787699.031197
[2025-07-22 11:45:06] 2025-07-22 15:44:29,810 | INFO     | intersect: 24152787699.031197
[2025-07-22 11:45:06] 2025-07-22 15:44:29,810 | INFO     | chi2: 0.9459023116162519
[2025-07-22 11:45:06] 2025-07-22 15:44:29,811 | INFO     | current chi2=0.9459023116162519 (change=64.4655339497027 %)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,811 | INFO     | sum of square deviations: 1605457543.630056
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | sum of deviations: -25270797498.537575
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | mean x: 1753193785.0462427
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | mean y: 2242193.9421965317
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | -- intersect: 27598490561.50867
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | intersect: 27598490561.50867
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | chi2: 0.9311492259323882
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | current chi2=0.9311492259323882 (change=1.559683859811619 %)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,812 | INFO     | left removable region: 20
[2025-07-22 11:45:06] 2025-07-22 15:44:29,813 | INFO     | sum of square deviations: 1088893927.5789447
[2025-07-22 11:45:06] 2025-07-22 15:44:29,813 | INFO     | sum of deviations: -8752372420.789474
[2025-07-22 11:45:06] 2025-07-22 15:44:29,813 | INFO     | mean x: 1753193754.5526316
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | mean y: 2252459.2236842103
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | -- intersect: 14094171127.338696
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | intersect: 14094171127.338696
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | chi2: 0.1160649466924363
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | -- intersect: 14094171127.338696
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | current memory leak: -8.04 B/s (using 152 data points, chi2=0.12)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,814 | INFO     | could have reported an average CPU frequency of 2990 MHz (10 samples)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | ..............................
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . Timing measurements:
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . get job = 0 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . initial setup = 4 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . payload setup = 23 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . stage-in = 0 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . payload execution = 11120 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . stage-out = 4 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | . log creation = 0 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,815 | INFO     | ..............................
[2025-07-22 11:45:06] 2025-07-22 15:44:29,906 | INFO     | 
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | job summary report
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | --------------------------------------------------
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | PanDA job id: 6741759376
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | task id: 45697472
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | errors: (none)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | pilot state: finished 
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | transexitcode: 0
[2025-07-22 11:45:06] 2025-07-22 15:44:29,907 | INFO     | exeerrorcode: 0
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | exeerrordiag: 
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | exitcode: 0
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | exitmsg: OK
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | cpuconsumptiontime: 51354 s
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | nevents: 400
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | neventsw: 0
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | pid: 1039270
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | pgrp: 1039270
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | corecount: 8
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | event service: False
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | sizes: {0: 2397477, 11: 2397767, 11148: 2427241, 11153: 2436239, 11156: 2436295, 11174: 2436489}
[2025-07-22 11:45:06] 2025-07-22 15:44:29,908 | INFO     | --------------------------------------------------
[2025-07-22 11:45:06] 2025-07-22 15:44:29,909 | INFO     | 
[2025-07-22 11:45:06] 2025-07-22 15:44:29,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-22 11:45:06] 2025-07-22 15:44:29,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | job 6741759376 has completed (purged errors)
[2025-07-22 11:45:06] 2025-07-22 15:44:29,963 | INFO     | overall cleanup function is called
[2025-07-22 11:45:06] 2025-07-22 15:44:30,981 | INFO     | --- collectZombieJob: --- 10, [1039270]
[2025-07-22 11:45:06] 2025-07-22 15:44:30,982 | INFO     | zombie collector waiting for pid 1039270
[2025-07-22 11:45:06] 2025-07-22 15:44:30,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 11:45:06] 2025-07-22 15:44:30,982 | INFO     | collected zombie processes
[2025-07-22 11:45:06] 2025-07-22 15:44:30,982 | INFO     | will attempt to kill all subprocesses of pid=1039270
[2025-07-22 11:45:06] 2025-07-22 15:44:31,451 | INFO     | PID=1030656 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 11:45:06] 2025-07-22 15:44:31,452 | INFO     | .. there are 37 such processes running
[2025-07-22 11:45:06] 2025-07-22 15:44:31,929 | INFO     | process IDs to be killed: [1039270] (in reverse order)
[2025-07-22 11:45:06] 2025-07-22 15:44:32,120 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 11:45:06] 2025-07-22 15:44:32,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 11:45:06] 2025-07-22 15:44:32,142 | INFO     | did not find any defunct processes belonging to 1039270
[2025-07-22 11:45:06] 2025-07-22 15:44:32,163 | INFO     | did not find any defunct processes belonging to 1039270
[2025-07-22 11:45:06] 2025-07-22 15:44:32,163 | INFO     | ready for new job
[2025-07-22 11:45:06] 2025-07-22 15:44:32,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 11:45:06] 2025-07-22 15:44:32,165 | INFO     | ***************************************
[2025-07-22 11:45:06] 2025-07-22 15:44:32,165 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 11:45:06] 2025-07-22 15:44:32,165 | INFO     | ***************************************
[2025-07-22 11:45:06] 2025-07-22 15:44:32,165 | INFO     | 
[2025-07-22 11:45:06] 2025-07-22 15:44:32,171 | INFO     | architecture information:
[2025-07-22 11:45:06] 2025-07-22 15:44:32,171 | INFO     | executing command: cat /etc/os-release
[2025-07-22 11:45:06] 2025-07-22 15:44:32,190 | INFO     | cat /etc/os-release:
[2025-07-22 11:45:06] NAME="CentOS Linux"
[2025-07-22 11:45:06] VERSION="7 (Core)"
[2025-07-22 11:45:06] ID="centos"
[2025-07-22 11:45:06] ID_LIKE="rhel fedora"
[2025-07-22 11:45:06] VERSION_ID="7"
[2025-07-22 11:45:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 11:45:06] ANSI_COLOR="0;31"
[2025-07-22 11:45:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 11:45:06] HOME_URL="https://www.centos.org/"
[2025-07-22 11:45:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 11:45:06] 
[2025-07-22 11:45:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 11:45:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 11:45:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 11:45:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 11:45:06] 
[2025-07-22 11:45:06] 2025-07-22 15:44:32,190 | INFO     | ***************************************
[2025-07-22 11:45:06] 2025-07-22 15:44:32,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-22 11:45:06] 2025-07-22 15:44:32,725 | INFO     | sufficient remaining disk space (74945921024 B)
[2025-07-22 11:45:06] 2025-07-22 15:44:32,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 11:45:06] 2025-07-22 15:44:32,726 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 11:45:06] 2025-07-22 15:44:32,726 | INFO     | update_server=False
[2025-07-22 11:45:06] 2025-07-22 15:44:32,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 11:45:06] 2025-07-22 15:44:32,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:45:06] 2025-07-22 15:44:32,726 | INFO     | aborting loop
[2025-07-22 11:45:06] 2025-07-22 15:44:32,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 11:45:06] 2025-07-22 15:44:32,885 | INFO     | all job control threads have been joined
[2025-07-22 11:45:06] 2025-07-22 15:44:33,298 | INFO     | all data control threads have been joined
[2025-07-22 11:45:06] 2025-07-22 15:44:33,732 | INFO     | [job] retrieve thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:33,736 | INFO     | [job] job monitor thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:33,797 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:33,875 | INFO     | [payload] failed_post thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:33,880 | INFO     | [data] copytool_in thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:33,892 | INFO     | [job] control thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,202 | INFO     | all payload control threads have been joined
[2025-07-22 11:45:06] 2025-07-22 15:44:34,305 | INFO     | [data] control thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,459 | INFO     | [job] validate thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,523 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,546 | INFO     | [payload] validate_post thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,737 | INFO     | [data] copytool_out thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,811 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:34,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:45:06] 2025-07-22 15:44:35,216 | INFO     | [payload] control thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:35,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 11:45:06] 2025-07-22 15:44:35,962 | INFO     | [job] queue monitor thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:39,865 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 11:45:06] 2025-07-22 15:44:40,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137399347008)>', '<ExcThread(monitor, started 140136897558272)>']
[2025-07-22 11:45:06] 2025-07-22 15:44:45,660 | INFO     | all workflow threads have been joined
[2025-07-22 11:45:06] 2025-07-22 15:44:45,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 11:45:06] 2025-07-22 15:44:45,660 | INFO     | traces error code: 0
[2025-07-22 11:45:06] 2025-07-22 15:44:45,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 11:45:06] 2025-07-22 15:45:05,250 | INFO     | PID=1030656 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 11:45:06] 2025-07-22 15:45:05,255 | INFO     | .. there are 37 such processes running
[2025-07-22 11:45:06] 2025-07-22 15:45:05,255 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 11:45:06] 2025-07-22 15:45:05,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 11:45:06] 2025-07-22 15:45:05,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 11:45:06] 2025-07-22 15:45:05,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 11:45:06] 2025-07-22 15:45:05,256 | INFO     | [monitor] control thread has ended
[2025-07-22 11:45:06] 2025-07-22 15:45:05,490 [wrapper] ==== pilot stdout END ====
[2025-07-22 11:45:06] 2025-07-22 15:45:05,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 11:45:06] 2025-07-22 15:45:05,570 [wrapper] pilotpid: 1030656
[2025-07-22 11:45:06] 2025-07-22 15:45:05,597 [wrapper] Pilot exit status: 0
[2025-07-22 11:45:06] 2025-07-22 15:45:05,707 [wrapper] pandaids: 6741759376
[2025-07-22 11:45:06] 2025-07-22 15:45:05,940 [wrapper] cleanup supervisor_pilot 1952345 1030657
[2025-07-22 11:45:06] 2025-07-22 15:45:05,954 [wrapper] Test setup, not cleaning
[2025-07-22 11:45:06] 2025-07-22 15:45:05,972 [wrapper] apfmon messages muted
[2025-07-22 11:45:06] 2025-07-22 15:45:05,995 [wrapper] ==== wrapper stdout END ====
[2025-07-22 11:45:06] 2025-07-22 15:45:06,017 [wrapper] ==== wrapper stderr END ====
[2025-07-22 11:45:06]  *** Error codes and diagnostics ***
[2025-07-22 11:45:06]     "exeErrorCode": 0,
[2025-07-22 11:45:06]     "exeErrorDiag": "",
[2025-07-22 11:45:06]     "pilotErrorCode": 0,
[2025-07-22 11:45:06]     "pilotErrorDiag": "",
[2025-07-22 11:45:06]  *** Listing of results directory ***
[2025-07-22 11:45:06] total 597980
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 02:34 pilot3.tar.gz
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 02:35 queuedata.json
[2025-07-22 11:45:06] -rwx------. 1 boincer umatlas     36292 Jul 22 02:35 runpilot2-wrapper.sh
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas       100 Jul 22 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 11:45:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 08:37 run_atlas
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas       105 Jul 22 08:37 job.xml
[2025-07-22 11:45:06] -rw-r--r--. 2 boincer umatlas 330422558 Jul 22 08:37 EVNT.45697470._000032.pool.root.1
[2025-07-22 11:45:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 08:37 start_atlas.sh
[2025-07-22 11:45:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 08:37 shared
[2025-07-22 11:45:06] -rw-r--r--. 2 boincer umatlas    542899 Jul 22 08:37 input.tar.gz
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas         0 Jul 22 08:37 boinc_lockfile
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas      2608 Jul 22 08:37 pandaJob.out
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas    976654 Jul 22 08:37 agis_schedconf.cvmfs.json
[2025-07-22 11:45:06] drwx------. 4 boincer umatlas      4096 Jul 22 08:37 pilot3
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas      6933 Jul 22 11:36 init_data.xml
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas 275321814 Jul 22 11:43 HITS.45697472._000790.pool.root.1
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas       531 Jul 22 11:43 boinc_task_state.xml
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas      1044 Jul 22 11:44 memory_monitor_summary.json
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas   1593031 Jul 22 11:44 agis_ddmendpoints.agis.ALL.json
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas    374464 Jul 22 11:44 log.45697472._000790.job.log.tgz.1
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas        95 Jul 22 11:44 pilot_heartbeat.json
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas      7788 Jul 22 11:44 heartbeat.json
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas        28 Jul 22 11:45 wrapper_checkpoint.txt
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas       823 Jul 22 11:45 pilotlog.txt
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas    983516 Jul 22 11:45 log.45697472._000790.job.log.1
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas       357 Jul 22 11:45 output.list
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas       620 Jul 22 11:45 runtime_log
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas   1372160 Jul 22 11:45 result.tar.gz
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 11:45 boinc_mmap_file
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas      8656 Jul 22 11:45 runtime_log.err
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas       658 Jul 22 11:45 8D5LDmXmLy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmobuKDmZlrP6m.diag
[2025-07-22 11:45:06] -rw-r--r--. 1 boincer umatlas     21091 Jul 22 11:45 stderr.txt
[2025-07-22 11:45:06] HITS file was successfully produced:
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas 275321814 Jul 22 11:43 shared/HITS.pool.root.1
[2025-07-22 11:45:06]  *** Contents of shared directory: ***
[2025-07-22 11:45:06] total 593448
[2025-07-22 11:45:06] -rw-r--r--. 2 boincer umatlas 330422558 Jul 22 08:37 ATLAS.root_0
[2025-07-22 11:45:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 08:37 start_atlas.sh
[2025-07-22 11:45:06] -rw-r--r--. 2 boincer umatlas    542899 Jul 22 08:37 input.tar.gz
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas 275321814 Jul 22 11:43 HITS.pool.root.1
[2025-07-22 11:45:06] -rw-------. 1 boincer umatlas   1372160 Jul 22 11:45 result.tar.gz
11:45:09 (1026967): run_atlas exited; CPU time 51828.219373
11:45:09 (1026967): called boinc_finish(0)

</stderr_txt>
]]>

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