Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:55:21 (883826): wrapper (7.7.26015): starting
04:55:21 (883826): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 04:55:21] Arguments: --nthreads 12
[2025-07-22 04:55:21] Threads: 12
[2025-07-22 04:55:21] Checking for CVMFS
[2025-07-22 04:55:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 04:55:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 04:55:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 04:55:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 04:55:22] 2.11.5.0 7119 29908 336920 148620 0 248 40234874 45568000 20806 130560 0 228593208 99.740 171000659 28145 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 04:55:22] CVMFS is ok
[2025-07-22 04:55:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 04:55:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 04:55:22] Further information can be found at the LHC@home message board.
[2025-07-22 04:55:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 04:55:22] Checking for apptainer binary...
[2025-07-22 04:55:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 04:55:22] Running /usr/bin/apptainer --version
[2025-07-22 04:55:22] apptainer version 1.4.1-1.el9
[2025-07-22 04:55:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 04:55:22] wns0089.triumf.lcg
[2025-07-22 04:55:22] apptainer works
[2025-07-22 04:55:22] Set ATHENA_PROC_NUMBER=12
[2025-07-22 04:55:22] Set ATHENA_CORE_NUMBER=12
[2025-07-22 04:55:22] Starting ATLAS job with PandaID=6741761764
[2025-07-22 04:55:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 05:00:29]  *** The last 200 lines of the pilot log: ***
[2025-07-22 05:00:29] 2025-07-22 11:59:56,070 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | WARNING  | wrong length of table data, x=[1753185436.0], y=[676.0] (must be same and length>=4)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | could have reported an average CPU frequency of 2542 MHz (4 samples)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | ..............................
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . Timing measurements:
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . get job = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . initial setup = 15 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . payload setup = 21 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . stage-in = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . payload execution = 42 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . stage-out = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . log creation = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | ..............................
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741761764/pilotlog.txt
[2025-07-22 05:00:29] 2025-07-22 11:59:56,168 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 05:00:29] - Log from pilotlog.txt -
[2025-07-22 05:00:29] 2025-07-22 11:59:56,066 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741761764/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,070 | INFO     | extracted standard info from prmon json
[2025-07-22 05:00:29] 2025-07-22 11:59:56,070 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | WARNING  | wrong length of table data, x=[1753185436.0], y=[676.0] (must be same and length>=4)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | could have reported an average CPU frequency of 2542 MHz (4 samples)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | ..............................
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . Timing measurements:
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . get job = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . initial setup = 15 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . payload setup = 21 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . stage-in = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . payload execution = 42 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . stage-out = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . log creation = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | ..............................
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741761764/pilotlog.txt
[2025-07-22 05:00:29] 2025-07-22 11:59:56,169 | WARNING  | 
[2025-07-22 05:00:29] [begin log extracts]
[2025-07-22 05:00:29] - Log from pilotlog.txt -
[2025-07-22 05:00:29] 2025-07-22 11:59:56,066 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741761764/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,070 | INFO     | extracted standard info from prmon json
[2025-07-22 05:00:29] 2025-07-22 11:59:56,070 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 05:00:29] 2025-07-22 11:59:56,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | WARNING  | wrong length of table data, x=[1753185436.0], y=[676.0] (must be same and length>=4)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | could have reported an average CPU frequency of 2542 MHz (4 samples)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | ..............................
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . Timing measurements:
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . get job = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . initial setup = 15 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . payload setup = 21 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . stage-in = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . payload execution = 42 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . stage-out = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | . log creation = 0 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | ..............................
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 05:00:29] 2025-07-22 11:59:56,072 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741761764/pilotlog.txt
[2025-07-22 05:00:29] [end log extracts]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,169 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,170 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | 
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | job summary report
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | --------------------------------------------------
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | PanDA job id: 6741761764
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | task id: 45697472
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 04:57:37,873 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | pilot state: failed 
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | transexitcode: 65
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | exeerrorcode: 65
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,227 | INFO     | exitcode: 65
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | nevents: 0
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | neventsw: 0
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | pid: 895776
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | pgrp: 895776
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | corecount: 12
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | event service: False
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | sizes: {0: 2397307, 1: 2397506, 2: 2397534, 13: 2397534, 16: 2397852, 23: 2397880, 68: 2421530, 69: 2421506, 70: 2425854, 197: 2425992}
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | --------------------------------------------------
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | 
[2025-07-22 05:00:29] 2025-07-22 11:59:56,228 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | job 6741761764 has completed (purged errors)
[2025-07-22 05:00:29] 2025-07-22 11:59:56,244 | INFO     | overall cleanup function is called
[2025-07-22 05:00:29] 2025-07-22 11:59:57,268 | INFO     | --- collectZombieJob: --- 10, [895776]
[2025-07-22 05:00:29] 2025-07-22 11:59:57,268 | INFO     | zombie collector waiting for pid 895776
[2025-07-22 05:00:29] 2025-07-22 11:59:57,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 05:00:29] 2025-07-22 11:59:57,268 | INFO     | collected zombie processes
[2025-07-22 05:00:29] 2025-07-22 11:59:57,268 | INFO     | will attempt to kill all subprocesses of pid=895776
[2025-07-22 05:00:29] 2025-07-22 11:59:57,872 | INFO     | process IDs to be killed: [895776] (in reverse order)
[2025-07-22 05:00:29] 2025-07-22 11:59:58,088 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 05:00:29] 2025-07-22 11:59:58,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 05:00:29] 2025-07-22 11:59:58,108 | INFO     | did not find any defunct processes belonging to 895776
[2025-07-22 05:00:29] 2025-07-22 11:59:58,151 | INFO     | did not find any defunct processes belonging to 895776
[2025-07-22 05:00:29] 2025-07-22 11:59:58,151 | INFO     | ready for new job
[2025-07-22 05:00:29] 2025-07-22 11:59:58,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 05:00:29] 2025-07-22 11:59:58,157 | INFO     | ***************************************
[2025-07-22 05:00:29] 2025-07-22 11:59:58,157 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 05:00:29] 2025-07-22 11:59:58,157 | INFO     | ***************************************
[2025-07-22 05:00:29] 2025-07-22 11:59:58,157 | INFO     | 
[2025-07-22 05:00:29] 2025-07-22 11:59:58,159 | INFO     | architecture information:
[2025-07-22 05:00:29] 2025-07-22 11:59:58,164 | INFO     | executing command: cat /etc/os-release
[2025-07-22 05:00:29] 2025-07-22 11:59:58,202 | INFO     | cat /etc/os-release:
[2025-07-22 05:00:29] NAME="CentOS Linux"
[2025-07-22 05:00:29] VERSION="7 (Core)"
[2025-07-22 05:00:29] ID="centos"
[2025-07-22 05:00:29] ID_LIKE="rhel fedora"
[2025-07-22 05:00:29] VERSION_ID="7"
[2025-07-22 05:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 05:00:29] ANSI_COLOR="0;31"
[2025-07-22 05:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 05:00:29] HOME_URL="https://www.centos.org/"
[2025-07-22 05:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 05:00:29] 
[2025-07-22 05:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 05:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 05:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 05:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 05:00:29] 
[2025-07-22 05:00:29] 2025-07-22 11:59:58,202 | INFO     | ***************************************
[2025-07-22 05:00:29] 2025-07-22 11:59:58,717 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 05:00:29] 2025-07-22 11:59:58,804 | INFO     | sufficient remaining disk space (1748141867008 B)
[2025-07-22 05:00:29] 2025-07-22 11:59:58,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 05:00:29] 2025-07-22 11:59:58,805 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 05:00:29] 2025-07-22 11:59:58,805 | INFO     | update_server=False
[2025-07-22 05:00:29] 2025-07-22 11:59:58,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 05:00:29] 2025-07-22 11:59:58,913 | INFO     | all payload control threads have been joined
[2025-07-22 05:00:29] 2025-07-22 11:59:59,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 05:00:29] 2025-07-22 11:59:59,204 | INFO     | aborting loop
[2025-07-22 05:00:29] 2025-07-22 11:59:59,800 | INFO     | all job control threads have been joined
[2025-07-22 05:00:29] 2025-07-22 11:59:59,825 | INFO     | [job] retrieve thread has finished
[2025-07-22 05:00:29] 2025-07-22 11:59:59,909 | INFO     | all data control threads have been joined
[2025-07-22 05:00:29] 2025-07-22 11:59:59,922 | INFO     | [payload] control thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 05:00:29] 2025-07-22 12:00:00,175 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,191 | INFO     | [payload] validate_post thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,210 | INFO     | [job] job monitor thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,367 | INFO     | [data] copytool_in thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,806 | INFO     | [job] control thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,835 | INFO     | [payload] failed_post thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,913 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,915 | INFO     | [data] control thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:00,957 | INFO     | [job] validate thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:01,061 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:01,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 05:00:29] 2025-07-22 12:00:01,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 05:00:29] 2025-07-22 12:00:02,023 | INFO     | [data] copytool_out thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:02,255 | INFO     | [job] queue monitor thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:05,706 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 05:00:29] 2025-07-22 12:00:06,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196167178048)>', '<ExcThread(monitor, started 140195181623040)>']
[2025-07-22 05:00:29] 2025-07-22 12:00:11,075 | INFO     | all workflow threads have been joined
[2025-07-22 05:00:29] 2025-07-22 12:00:11,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 05:00:29] 2025-07-22 12:00:11,075 | INFO     | traces error code: 0
[2025-07-22 05:00:29] 2025-07-22 12:00:11,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 05:00:29] 2025-07-22 12:00:28,462 | INFO     | PID=889350 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 05:00:29] 2025-07-22 12:00:28,462 | INFO     | .. there are 35 such processes running
[2025-07-22 05:00:29] 2025-07-22 12:00:28,462 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 05:00:29] 2025-07-22 12:00:28,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 05:00:29] 2025-07-22 12:00:28,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 05:00:29] 2025-07-22 12:00:28,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 05:00:29] 2025-07-22 12:00:28,463 | INFO     | [monitor] control thread has ended
[2025-07-22 05:00:29] 2025-07-22 12:00:28,682 [wrapper] ==== pilot stdout END ====
[2025-07-22 05:00:29] 2025-07-22 12:00:28,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 05:00:29] 2025-07-22 12:00:28,766 [wrapper] pilotpid: 889350
[2025-07-22 05:00:29] 2025-07-22 12:00:28,778 [wrapper] Pilot exit status: 0
[2025-07-22 05:00:29] 2025-07-22 12:00:28,959 [wrapper] pandaids: 6741761764
[2025-07-22 05:00:29] 2025-07-22 12:00:29,059 [wrapper] cleanup supervisor_pilot  889356 889351
[2025-07-22 05:00:29] 2025-07-22 12:00:29,074 [wrapper] Test setup, not cleaning
[2025-07-22 05:00:29] 2025-07-22 12:00:29,099 [wrapper] apfmon messages muted
[2025-07-22 05:00:29] 2025-07-22 12:00:29,130 [wrapper] ==== wrapper stdout END ====
[2025-07-22 05:00:29] 2025-07-22 12:00:29,148 [wrapper] ==== wrapper stderr END ====
[2025-07-22 05:00:29]  *** Error codes and diagnostics ***
[2025-07-22 05:00:29]     "exeErrorCode": 65,
[2025-07-22 05:00:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 05:00:29]     "pilotErrorCode": 1305,
[2025-07-22 05:00:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 05:00:29]  *** Listing of results directory ***
[2025-07-22 05:00:29] total 324264
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc    530466 Jul 22 01:57 pilot3.tar.gz
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc      5112 Jul 22 02:03 queuedata.json
[2025-07-22 05:00:29] -rwx------. 1 boinc boinc     36292 Jul 22 02:06 runpilot2-wrapper.sh
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc       100 Jul 22 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 05:00:29] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 04:55 run_atlas
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc       105 Jul 22 04:55 job.xml
[2025-07-22 05:00:29] -rw-r--r--. 2 boinc boinc 327969151 Jul 22 04:55 EVNT.45697470._000105.pool.root.1
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc      6597 Jul 22 04:55 init_data.xml
[2025-07-22 05:00:29] -rw-r--r--. 2 boinc boinc     15095 Jul 22 04:55 start_atlas.sh
[2025-07-22 05:00:29] drwxrwx--x. 2 boinc boinc      4096 Jul 22 04:55 shared
[2025-07-22 05:00:29] -rw-r--r--. 2 boinc boinc    542904 Jul 22 04:55 input.tar.gz
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc         0 Jul 22 04:55 boinc_lockfile
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc      2610 Jul 22 04:55 pandaJob.out
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc    976662 Jul 22 04:55 agis_schedconf.cvmfs.json
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc   1593031 Jul 22 04:56 agis_ddmendpoints.agis.ALL.json
[2025-07-22 05:00:29] drwx------. 4 boinc boinc      4096 Jul 22 04:56 pilot3
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc       523 Jul 22 04:57 boinc_task_state.xml
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc       978 Jul 22 04:57 memory_monitor_summary.json
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc     21628 Jul 22 04:57 log.45697472._001946.job.log.tgz.1
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc        95 Jul 22 04:59 pilot_heartbeat.json
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc      8428 Jul 22 04:59 heartbeat.json
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc      8192 Jul 22 05:00 boinc_mmap_file
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc        22 Jul 22 05:00 wrapper_checkpoint.txt
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc       822 Jul 22 05:00 pilotlog.txt
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc     80517 Jul 22 05:00 log.45697472._001946.job.log.1
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc       188 Jul 22 05:00 output.list
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc       620 Jul 22 05:00 runtime_log
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc    122880 Jul 22 05:00 result.tar.gz
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc      8485 Jul 22 05:00 runtime_log.err
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc       644 Jul 22 05:00 rppMDmB8Ny7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI0ILDmYXMtOo.diag
[2025-07-22 05:00:29] -rw-r--r--. 1 boinc boinc     21817 Jul 22 05:00 stderr.txt
[2025-07-22 05:00:29] No HITS result produced
[2025-07-22 05:00:29]  *** Contents of shared directory: ***
[2025-07-22 05:00:29] total 320956
[2025-07-22 05:00:29] -rw-r--r--. 2 boinc boinc 327969151 Jul 22 04:55 ATLAS.root_0
[2025-07-22 05:00:29] -rw-r--r--. 2 boinc boinc     15095 Jul 22 04:55 start_atlas.sh
[2025-07-22 05:00:29] -rw-r--r--. 2 boinc boinc    542904 Jul 22 04:55 input.tar.gz
[2025-07-22 05:00:29] -rw-------. 1 boinc boinc    122880 Jul 22 05:00 result.tar.gz
05:00:31 (883826): run_atlas exited; CPU time 26.564802
05:00:31 (883826): called boinc_finish(0)

</stderr_txt>
]]>

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