Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:47:11 (42208): wrapper (7.7.26015): starting
07:47:11 (42208): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 07:47:11] Arguments: --nthreads 8
[2025-07-22 07:47:11] Threads: 8
[2025-07-22 07:47:11] Checking for CVMFS
[2025-07-22 07:47:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 07:47:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 07:47:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 07:47:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 07:47:12] 2.13.1.0 679170 6899 167620 148620 0 373 23896643 40960001 21145 16776704 0 14137106 99.893 15856396 54863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 07:47:12] CVMFS is ok
[2025-07-22 07:47:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 07:47:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 07:47:12] Further information can be found at the LHC@home message board.
[2025-07-22 07:47:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 07:47:12] Checking for apptainer binary...
[2025-07-22 07:47:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 07:47:12] Running /usr/bin/apptainer --version
[2025-07-22 07:47:12] apptainer version 1.4.1-1.el9
[2025-07-22 07:47:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 07:47:12] c-212-10.aglt2.org
[2025-07-22 07:47:12] apptainer works
[2025-07-22 07:47:12] Set ATHENA_PROC_NUMBER=8
[2025-07-22 07:47:12] Set ATHENA_CORE_NUMBER=8
[2025-07-22 07:47:12] Starting ATLAS job with PandaID=6741946344
[2025-07-22 07:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 11:31:43]  *** The last 200 lines of the pilot log: ***
[2025-07-22 11:31:44] 2025-07-22 15:31:09,139 | INFO     | .. there are 13 such processes running
[2025-07-22 11:31:44] 2025-07-22 15:31:10,241 | INFO     | monitor loop #876: job 0:6741946344 is in state 'finished'
[2025-07-22 11:31:44] 2025-07-22 15:31:10,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,015 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 11:31:44] 2025-07-22 15:31:11,021 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3036.0869166666657
[2025-07-22 11:31:44] 2025-07-22 15:31:11,036 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741946344/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,037 | INFO     | extracted standard info from prmon json
[2025-07-22 11:31:44] 2025-07-22 15:31:11,037 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 11:31:44] 2025-07-22 15:31:11,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 11:31:44] 2025-07-22 15:31:11,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 11:31:44] 2025-07-22 15:31:11,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 11:31:44] 2025-07-22 15:31:11,041 | INFO     | fitting pss+swap vs Time
[2025-07-22 11:31:44] 2025-07-22 15:31:11,042 | INFO     | sum of square deviations: 3212479394.2064137
[2025-07-22 11:31:44] 2025-07-22 15:31:11,043 | INFO     | sum of deviations: -24542133109.041283
[2025-07-22 11:31:44] 2025-07-22 15:31:11,043 | INFO     | mean x: 1753191594.5366971
[2025-07-22 11:31:44] 2025-07-22 15:31:11,043 | INFO     | mean y: 2600612.6926605506
[2025-07-22 11:31:44] 2025-07-22 15:31:11,043 | INFO     | -- intersect: 13396324337.853249
[2025-07-22 11:31:44] 2025-07-22 15:31:11,043 | INFO     | intersect: 13396324337.853249
[2025-07-22 11:31:44] 2025-07-22 15:31:11,044 | INFO     | chi2: 1.7535710569194833
[2025-07-22 11:31:44] 2025-07-22 15:31:11,044 | INFO     | sum of square deviations: 2996468481.6995363
[2025-07-22 11:31:44] 2025-07-22 15:31:11,045 | INFO     | sum of deviations: -24127914064.577457
[2025-07-22 11:31:44] 2025-07-22 15:31:11,045 | INFO     | mean x: 1753191442.0375588
[2025-07-22 11:31:44] 2025-07-22 15:31:11,045 | INFO     | mean y: 2600905.1971830986
[2025-07-22 11:31:44] 2025-07-22 15:31:11,046 | INFO     | -- intersect: 14119503088.744484
[2025-07-22 11:31:44] 2025-07-22 15:31:11,046 | INFO     | intersect: 14119503088.744484
[2025-07-22 11:31:44] 2025-07-22 15:31:11,046 | INFO     | chi2: 1.750265330643794
[2025-07-22 11:31:44] 2025-07-22 15:31:11,046 | INFO     | current chi2=1.750265330643794 (change=0.1885139619888835 %)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,046 | INFO     | right removable region: 212
[2025-07-22 11:31:44] 2025-07-22 15:31:11,046 | INFO     | sum of square deviations: 2996463601.6995363
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | sum of deviations: -53666888479.70891
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | mean x: 1753191747.0375588
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | mean y: 2620876.7136150235
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | -- intersect: 31402416929.11539
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | intersect: 31402416929.11539
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | chi2: 0.3396300914078923
[2025-07-22 11:31:44] 2025-07-22 15:31:11,048 | INFO     | current chi2=0.3396300914078923 (change=80.63208844216875 %)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,049 | INFO     | sum of square deviations: 2790354971.6923246
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | sum of deviations: -43806186773.53849
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | mean x: 1753191899.5384614
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | mean y: 2613574.6923076925
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | -- intersect: 27526227086.294266
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | intersect: 27526227086.294266
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | chi2: 0.31449139706562157
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | current chi2=0.31449139706562157 (change=7.401786525469974 %)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,050 | INFO     | left removable region: 20
[2025-07-22 11:31:44] 2025-07-22 15:31:11,051 | INFO     | sum of square deviations: 2194692227.744788
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | sum of deviations: -20668788620.390644
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | mean x: 1753192021.5364583
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | mean y: 2595577.984375
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | -- intersect: 16513500772.79978
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | intersect: 16513500772.79978
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | chi2: 0.19859483376561807
[2025-07-22 11:31:44] 2025-07-22 15:31:11,052 | INFO     | -- intersect: 16513500772.79978
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | current memory leak: -9.42 B/s (using 192 data points, chi2=0.20)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | could have reported an average CPU frequency of 3004 MHz (11 samples)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | ..............................
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | . Timing measurements:
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | . get job = 0 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | . initial setup = 4 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | . payload setup = 26 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,053 | INFO     | . stage-in = 0 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,054 | INFO     | . payload execution = 13293 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,054 | INFO     | . stage-out = 2 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,054 | INFO     | . log creation = 0 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,054 | INFO     | ..............................
[2025-07-22 11:31:44] 2025-07-22 15:31:11,139 | INFO     | 
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | job summary report
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | --------------------------------------------------
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | PanDA job id: 6741946344
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | task id: 45697523
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | errors: (none)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | pilot state: finished 
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | transexitcode: 0
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | exeerrorcode: 0
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | exeerrordiag: 
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | exitcode: 0
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | exitmsg: OK
[2025-07-22 11:31:44] 2025-07-22 15:31:11,140 | INFO     | cpuconsumptiontime: 49060 s
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | nevents: 400
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | neventsw: 0
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | pid: 53758
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | pgrp: 53758
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | corecount: 8
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | event service: False
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | sizes: {0: 2397323, 1: 2397578, 2: 2397578, 12: 2397606, 23: 2397634, 25: 2397924, 34: 2398080, 13324: 2428185, 13328: 2437239, 13334: 2437377}
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | --------------------------------------------------
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | 
[2025-07-22 11:31:44] 2025-07-22 15:31:11,141 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 11:31:44] 2025-07-22 15:31:11,167 | INFO     | job 6741946344 has completed (purged errors)
[2025-07-22 11:31:44] 2025-07-22 15:31:11,167 | INFO     | overall cleanup function is called
[2025-07-22 11:31:44] 2025-07-22 15:31:12,175 | INFO     | --- collectZombieJob: --- 10, [53758]
[2025-07-22 11:31:44] 2025-07-22 15:31:12,176 | INFO     | zombie collector waiting for pid 53758
[2025-07-22 11:31:44] 2025-07-22 15:31:12,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 11:31:44] 2025-07-22 15:31:12,176 | INFO     | collected zombie processes
[2025-07-22 11:31:44] 2025-07-22 15:31:12,176 | INFO     | will attempt to kill all subprocesses of pid=53758
[2025-07-22 11:31:44] 2025-07-22 15:31:12,624 | INFO     | process IDs to be killed: [53758] (in reverse order)
[2025-07-22 11:31:44] 2025-07-22 15:31:12,753 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 11:31:44] 2025-07-22 15:31:12,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 11:31:44] 2025-07-22 15:31:12,768 | INFO     | did not find any defunct processes belonging to 53758
[2025-07-22 11:31:44] 2025-07-22 15:31:12,780 | INFO     | did not find any defunct processes belonging to 53758
[2025-07-22 11:31:44] 2025-07-22 15:31:12,781 | INFO     | ready for new job
[2025-07-22 11:31:44] 2025-07-22 15:31:12,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 11:31:44] 2025-07-22 15:31:12,783 | INFO     | ***************************************
[2025-07-22 11:31:44] 2025-07-22 15:31:12,783 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 11:31:44] 2025-07-22 15:31:12,783 | INFO     | ***************************************
[2025-07-22 11:31:44] 2025-07-22 15:31:12,783 | INFO     | 
[2025-07-22 11:31:44] 2025-07-22 15:31:12,788 | INFO     | architecture information:
[2025-07-22 11:31:44] 2025-07-22 15:31:12,788 | INFO     | executing command: cat /etc/os-release
[2025-07-22 11:31:44] 2025-07-22 15:31:12,805 | INFO     | cat /etc/os-release:
[2025-07-22 11:31:44] NAME="CentOS Linux"
[2025-07-22 11:31:44] VERSION="7 (Core)"
[2025-07-22 11:31:44] ID="centos"
[2025-07-22 11:31:44] ID_LIKE="rhel fedora"
[2025-07-22 11:31:44] VERSION_ID="7"
[2025-07-22 11:31:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 11:31:44] ANSI_COLOR="0;31"
[2025-07-22 11:31:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 11:31:44] HOME_URL="https://www.centos.org/"
[2025-07-22 11:31:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 11:31:44] 
[2025-07-22 11:31:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 11:31:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 11:31:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 11:31:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 11:31:44] 
[2025-07-22 11:31:44] 2025-07-22 15:31:12,806 | INFO     | ***************************************
[2025-07-22 11:31:44] 2025-07-22 15:31:13,309 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 11:31:44] 2025-07-22 15:31:13,360 | INFO     | sufficient remaining disk space (128102432768 B)
[2025-07-22 11:31:44] 2025-07-22 15:31:13,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 11:31:44] 2025-07-22 15:31:13,361 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 11:31:44] 2025-07-22 15:31:13,361 | INFO     | update_server=False
[2025-07-22 11:31:44] 2025-07-22 15:31:13,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 11:31:44] 2025-07-22 15:31:13,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 11:31:44] 2025-07-22 15:31:13,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:31:44] 2025-07-22 15:31:13,769 | INFO     | aborting loop
[2025-07-22 11:31:44] 2025-07-22 15:31:14,067 | INFO     | all payload control threads have been joined
[2025-07-22 11:31:44] 2025-07-22 15:31:14,262 | INFO     | all data control threads have been joined
[2025-07-22 11:31:44] 2025-07-22 15:31:14,367 | INFO     | [job] retrieve thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:14,551 | INFO     | [data] copytool_in thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:14,684 | INFO     | all job control threads have been joined
[2025-07-22 11:31:44] 2025-07-22 15:31:14,774 | INFO     | [job] job monitor thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,072 | INFO     | [payload] control thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,174 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,187 | INFO     | [payload] validate_post thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,188 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 11:31:44] 2025-07-22 15:31:15,267 | INFO     | [data] control thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,367 | INFO     | [data] copytool_out thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,674 | INFO     | [job] validate thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,689 | INFO     | [job] control thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,828 | INFO     | [payload] failed_post thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:15,859 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:16,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:31:44] 2025-07-22 15:31:17,158 | INFO     | [job] queue monitor thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:19,231 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:23,918 | INFO     | job.realtimelogging is not enabled
[2025-07-22 11:31:44] 2025-07-22 15:31:24,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 11:31:44] 2025-07-22 15:31:25,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310406977344)>', '<ExcThread(monitor, started 140309904209664)>']
[2025-07-22 11:31:44] 2025-07-22 15:31:30,955 | INFO     | all workflow threads have been joined
[2025-07-22 11:31:44] 2025-07-22 15:31:30,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 11:31:44] 2025-07-22 15:31:30,956 | INFO     | traces error code: 0
[2025-07-22 11:31:44] 2025-07-22 15:31:30,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 11:31:44] 2025-07-22 15:31:43,632 | INFO     | PID=45929 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-22 11:31:44] 2025-07-22 15:31:43,633 | INFO     | .. there are 13 such processes running
[2025-07-22 11:31:44] 2025-07-22 15:31:43,634 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 11:31:44] 2025-07-22 15:31:43,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 11:31:44] 2025-07-22 15:31:43,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 11:31:44] 2025-07-22 15:31:43,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 11:31:44] 2025-07-22 15:31:43,635 | INFO     | [monitor] control thread has ended
[2025-07-22 11:31:44] 2025-07-22 15:31:43,808 [wrapper] ==== pilot stdout END ====
[2025-07-22 11:31:44] 2025-07-22 15:31:43,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 11:31:44] 2025-07-22 15:31:43,814 [wrapper] pilotpid: 45929
[2025-07-22 11:31:44] 2025-07-22 15:31:43,817 [wrapper] Pilot exit status: 0
[2025-07-22 11:31:44] 2025-07-22 15:31:43,832 [wrapper] pandaids: 6741946344
[2025-07-22 11:31:44] 2025-07-22 15:31:43,915 [wrapper] cleanup supervisor_pilot  460849 45930
[2025-07-22 11:31:44] 2025-07-22 15:31:43,919 [wrapper] Test setup, not cleaning
[2025-07-22 11:31:44] 2025-07-22 15:31:43,922 [wrapper] apfmon messages muted
[2025-07-22 11:31:44] 2025-07-22 15:31:43,925 [wrapper] ==== wrapper stdout END ====
[2025-07-22 11:31:44] 2025-07-22 15:31:43,928 [wrapper] ==== wrapper stderr END ====
[2025-07-22 11:31:44]  *** Error codes and diagnostics ***
[2025-07-22 11:31:44]     "exeErrorCode": 0,
[2025-07-22 11:31:44]     "exeErrorDiag": "",
[2025-07-22 11:31:44]     "pilotErrorCode": 0,
[2025-07-22 11:31:44]     "pilotErrorDiag": "",
[2025-07-22 11:31:44]  *** Listing of results directory ***
[2025-07-22 11:31:44] total 568296
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 23:01 pilot3.tar.gz
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 23:21 queuedata.json
[2025-07-22 11:31:44] -rwx------. 1 boincer umatlas     36292 Jul 21 23:21 runpilot2-wrapper.sh
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas       100 Jul 22 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 11:31:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 07:47 run_atlas
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas       105 Jul 22 07:47 job.xml
[2025-07-22 11:31:44] -rw-r--r--. 2 boincer umatlas 318334980 Jul 22 07:47 EVNT.45697521._000186.pool.root.1
[2025-07-22 11:31:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 07:47 start_atlas.sh
[2025-07-22 11:31:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 07:47 shared
[2025-07-22 11:31:44] -rw-r--r--. 2 boincer umatlas    542912 Jul 22 07:47 input.tar.gz
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas         0 Jul 22 07:47 boinc_lockfile
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas      2633 Jul 22 07:47 pandaJob.out
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas    976662 Jul 22 07:47 agis_schedconf.cvmfs.json
[2025-07-22 11:31:44] drwx------. 4 boincer umatlas      4096 Jul 22 07:48 pilot3
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas      6943 Jul 22 11:20 init_data.xml
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas 256713525 Jul 22 11:30 HITS.45697523._004658.pool.root.1
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas       531 Jul 22 11:30 boinc_task_state.xml
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas      1035 Jul 22 11:30 memory_monitor_summary.json
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas   1593031 Jul 22 11:31 agis_ddmendpoints.agis.ALL.json
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas    367898 Jul 22 11:31 log.45697523._004658.job.log.tgz.1
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas      7772 Jul 22 11:31 heartbeat.json
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas        28 Jul 22 11:31 wrapper_checkpoint.txt
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 11:31 boinc_mmap_file
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas        95 Jul 22 11:31 pilot_heartbeat.json
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas       821 Jul 22 11:31 pilotlog.txt
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas   1137872 Jul 22 11:31 log.45697523._004658.job.log.1
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas       357 Jul 22 11:31 output.list
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas       620 Jul 22 11:31 runtime_log
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas   1525760 Jul 22 11:31 result.tar.gz
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas       656 Jul 22 11:31 VTTNDmakIy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtNuKDmyxneAo.diag
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas      8661 Jul 22 11:31 runtime_log.err
[2025-07-22 11:31:44] -rw-r--r--. 1 boincer umatlas     21189 Jul 22 11:31 stderr.txt
[2025-07-22 11:31:44] HITS file was successfully produced:
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas 256713525 Jul 22 11:30 shared/HITS.pool.root.1
[2025-07-22 11:31:44]  *** Contents of shared directory: ***
[2025-07-22 11:31:44] total 563624
[2025-07-22 11:31:44] -rw-r--r--. 2 boincer umatlas 318334980 Jul 22 07:47 ATLAS.root_0
[2025-07-22 11:31:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 07:47 start_atlas.sh
[2025-07-22 11:31:44] -rw-r--r--. 2 boincer umatlas    542912 Jul 22 07:47 input.tar.gz
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas 256713525 Jul 22 11:30 HITS.pool.root.1
[2025-07-22 11:31:44] -rw-------. 1 boincer umatlas   1525760 Jul 22 11:31 result.tar.gz
11:31:45 (42208): run_atlas exited; CPU time 49391.858683
11:31:45 (42208): called boinc_finish(0)

</stderr_txt>
]]>

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