Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:51:55 (11676): wrapper (7.7.26015): starting
07:51:55 (11676): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 07:51:55] Arguments: --nthreads 12
[2025-07-22 07:51:55] Threads: 12
[2025-07-22 07:51:55] Checking for CVMFS
[2025-07-22 07:51:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 07:51:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 07:51:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 07:51:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 07:51:56] 2.11.2.0 2924 104719 98256 148620 0 57 13079636 20275201 1 130560 0 33820275 99.968 10007013 11058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 07:51:56] CVMFS is ok
[2025-07-22 07:51:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 07:51:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 07:51:56] Further information can be found at the LHC@home message board.
[2025-07-22 07:51:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 07:51:56] Checking for apptainer binary...
[2025-07-22 07:51:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 07:51:56] Running /usr/bin/apptainer --version
[2025-07-22 07:51:56] apptainer version 1.3.2-1.el7
[2025-07-22 07:51:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 07:51:57] c-205-28.aglt2.org
[2025-07-22 07:51:57] apptainer works
[2025-07-22 07:51:57] Set ATHENA_PROC_NUMBER=12
[2025-07-22 07:51:57] Set ATHENA_CORE_NUMBER=12
[2025-07-22 07:51:57] Starting ATLAS job with PandaID=6741709509
[2025-07-22 07:51:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 09:32:56]  *** The last 200 lines of the pilot log: ***
[2025-07-22 09:32:56]  lfn=log.45697453._001279.job.log.tgz.1
[2025-07-22 09:32:56]  mtime=0
[2025-07-22 09:32:56]  protocol_id=None
[2025-07-22 09:32:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-22 09:32:56]  replicas=None
[2025-07-22 09:32:56]  scope=mc23_13p6TeV
[2025-07-22 09:32:56]  status=None
[2025-07-22 09:32:56]  status_code=0
[2025-07-22 09:32:56]  storage_token=
[2025-07-22 09:32:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6741709509/log.45697453._001279.job.log.tgz.1
[2025-07-22 09:32:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/ad/log.45697453._001279.job.log.tgz.1
[2025-07-22 09:32:56]  workdir=None
[2025-07-22 09:32:56] ]
[2025-07-22 09:32:56] 2025-07-22 13:32:16,864 | INFO     | transferring file log.45697453._001279.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6741709509/log.45697453._001279.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-22 09:32:56] 2025-07-22 13:32:16,865 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6741709509/log.45697453._001279.job.log.tgz.1 /tmp/boinchome/slots/0/log.45697453._001279.job
[2025-07-22 09:32:56] 2025-07-22 13:32:16,888 | INFO     | adding to output.list: log.45697453._001279.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/ad/log.45697453._001279.job.log.tg
[2025-07-22 09:32:56] 2025-07-22 13:32:16,890 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-22 09:32:56] 2025-07-22 13:32:16,890 | INFO     | summary of transferred files:
[2025-07-22 09:32:56] 2025-07-22 13:32:16,890 | INFO     |  -- lfn=log.45697453._001279.job.log.tgz.1, status_code=0, status=transferred
[2025-07-22 09:32:56] 2025-07-22 13:32:16,891 | INFO     | stage-out finished correctly
[2025-07-22 09:32:56] 2025-07-22 13:32:16,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-22 09:32:56] 2025-07-22 13:32:18,212 | INFO     | job 6741709509 has state=finished
[2025-07-22 09:32:56] 2025-07-22 13:32:18,212 | INFO     | preparing for final server update for job 6741709509 in state='finished'
[2025-07-22 09:32:56] 2025-07-22 13:32:18,213 | INFO     | this job has now completed (state=finished)
[2025-07-22 09:32:56] 2025-07-22 13:32:18,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 09:32:56] 2025-07-22 13:32:18,214 | INFO     | log transfer has been attempted: DONE
[2025-07-22 09:32:56] 2025-07-22 13:32:18,214 | INFO     | job 6741709509 has finished - writing final server update
[2025-07-22 09:32:56] 2025-07-22 13:32:18,214 | INFO     | total number of processed events: 400 (read)
[2025-07-22 09:32:56] 2025-07-22 13:32:18,215 | INFO     | executing command: lscpu
[2025-07-22 09:32:56] 2025-07-22 13:32:18,240 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 09:32:56] 2025-07-22 13:32:18,517 | INFO     | monitor loop #445: job 0:6741709509 is in state 'finished'
[2025-07-22 09:32:56] 2025-07-22 13:32:18,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 09:32:56] 2025-07-22 13:32:21,020 | INFO     | monitor loop #446: job 0:6741709509 is in state 'finished'
[2025-07-22 09:32:56] 2025-07-22 13:32:21,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 09:32:56] 2025-07-22 13:32:23,524 | INFO     | monitor loop #447: job 0:6741709509 is in state 'finished'
[2025-07-22 09:32:56] 2025-07-22 13:32:23,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,016 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-22 09:32:56] 2025-07-22 13:32:24,021 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-22 09:32:56] 2025-07-22 13:32:24,024 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741709509/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,024 | INFO     | extracted standard info from prmon json
[2025-07-22 09:32:56] 2025-07-22 13:32:24,024 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 09:32:56] 2025-07-22 13:32:24,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 09:32:56] 2025-07-22 13:32:24,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 09:32:56] 2025-07-22 13:32:24,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 09:32:56] 2025-07-22 13:32:24,027 | INFO     | fitting pss+swap vs Time
[2025-07-22 09:32:56] 2025-07-22 13:32:24,028 | INFO     | sum of square deviations: 233641590.0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,028 | INFO     | sum of deviations: -7594530499.999995
[2025-07-22 09:32:56] 2025-07-22 13:32:24,028 | INFO     | mean x: 1753188212.0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,028 | INFO     | mean y: 2801258.945054945
[2025-07-22 09:32:56] 2025-07-22 13:32:24,028 | INFO     | -- intersect: 56990263757.699905
[2025-07-22 09:32:56] 2025-07-22 13:32:24,028 | INFO     | intersect: 56990263757.699905
[2025-07-22 09:32:56] 2025-07-22 13:32:24,029 | INFO     | chi2: 0.12234252292819509
[2025-07-22 09:32:56] 2025-07-22 13:32:24,029 | INFO     | -- intersect: 56990263757.699905
[2025-07-22 09:32:56] 2025-07-22 13:32:24,029 | INFO     | current memory leak: -32.51 B/s (using 91 data points, chi2=0.12)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,029 | INFO     | could have reported an average CPU frequency of 2142 MHz (7 samples)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | ..............................
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . Timing measurements:
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . get job = 0 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . initial setup = 2 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . payload setup = 9 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . stage-in = 0 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . payload execution = 5974 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . stage-out = 0 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,030 | INFO     | . log creation = 0 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,031 | INFO     | ..............................
[2025-07-22 09:32:56] 2025-07-22 13:32:24,116 | INFO     | 
[2025-07-22 09:32:56] 2025-07-22 13:32:24,116 | INFO     | job summary report
[2025-07-22 09:32:56] 2025-07-22 13:32:24,116 | INFO     | --------------------------------------------------
[2025-07-22 09:32:56] 2025-07-22 13:32:24,116 | INFO     | PanDA job id: 6741709509
[2025-07-22 09:32:56] 2025-07-22 13:32:24,116 | INFO     | task id: 45697453
[2025-07-22 09:32:56] 2025-07-22 13:32:24,117 | INFO     | errors: (none)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 09:32:56] 2025-07-22 13:32:24,117 | INFO     | pilot state: finished 
[2025-07-22 09:32:56] 2025-07-22 13:32:24,117 | INFO     | transexitcode: 0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,117 | INFO     | exeerrorcode: 0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,117 | INFO     | exeerrordiag: 
[2025-07-22 09:32:56] 2025-07-22 13:32:24,118 | INFO     | exitcode: 0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,118 | INFO     | exitmsg: OK
[2025-07-22 09:32:56] 2025-07-22 13:32:24,118 | INFO     | cpuconsumptiontime: 65189 s
[2025-07-22 09:32:56] 2025-07-22 13:32:24,118 | INFO     | nevents: 400
[2025-07-22 09:32:56] 2025-07-22 13:32:24,118 | INFO     | neventsw: 0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,118 | INFO     | pid: 21727
[2025-07-22 09:32:56] 2025-07-22 13:32:24,119 | INFO     | pgrp: 21727
[2025-07-22 09:32:56] 2025-07-22 13:32:24,119 | INFO     | corecount: 12
[2025-07-22 09:32:56] 2025-07-22 13:32:24,119 | INFO     | event service: False
[2025-07-22 09:32:56] 2025-07-22 13:32:24,119 | INFO     | sizes: {0: 2397379, 1: 2397578, 6: 2397840, 12: 2397868, 5988: 2424640, 5990: 2433822, 5997: 2433960}
[2025-07-22 09:32:56] 2025-07-22 13:32:24,119 | INFO     | --------------------------------------------------
[2025-07-22 09:32:56] 2025-07-22 13:32:24,119 | INFO     | 
[2025-07-22 09:32:56] 2025-07-22 13:32:24,120 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 09:32:56] 2025-07-22 13:32:24,143 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,143 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 09:32:56] 2025-07-22 13:32:24,147 | INFO     | job 6741709509 has completed (purged errors)
[2025-07-22 09:32:56] 2025-07-22 13:32:24,147 | INFO     | overall cleanup function is called
[2025-07-22 09:32:56] 2025-07-22 13:32:25,155 | INFO     | --- collectZombieJob: --- 10, [21727]
[2025-07-22 09:32:56] 2025-07-22 13:32:25,155 | INFO     | zombie collector waiting for pid 21727
[2025-07-22 09:32:56] 2025-07-22 13:32:25,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 09:32:56] 2025-07-22 13:32:25,161 | INFO     | collected zombie processes
[2025-07-22 09:32:56] 2025-07-22 13:32:25,161 | INFO     | will attempt to kill all subprocesses of pid=21727
[2025-07-22 09:32:56] 2025-07-22 13:32:25,254 | INFO     | process IDs to be killed: [21727] (in reverse order)
[2025-07-22 09:32:56] 2025-07-22 13:32:25,309 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 09:32:56] 2025-07-22 13:32:25,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 09:32:56] 2025-07-22 13:32:25,313 | INFO     | did not find any defunct processes belonging to 21727
[2025-07-22 09:32:56] 2025-07-22 13:32:25,315 | INFO     | did not find any defunct processes belonging to 21727
[2025-07-22 09:32:56] 2025-07-22 13:32:25,316 | INFO     | ready for new job
[2025-07-22 09:32:56] 2025-07-22 13:32:25,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 09:32:56] 2025-07-22 13:32:25,317 | INFO     | ***************************************
[2025-07-22 09:32:56] 2025-07-22 13:32:25,317 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 09:32:56] 2025-07-22 13:32:25,317 | INFO     | ***************************************
[2025-07-22 09:32:56] 2025-07-22 13:32:25,317 | INFO     | 
[2025-07-22 09:32:56] 2025-07-22 13:32:25,318 | INFO     | architecture information:
[2025-07-22 09:32:56] 2025-07-22 13:32:25,318 | INFO     | executing command: cat /etc/os-release
[2025-07-22 09:32:56] 2025-07-22 13:32:25,333 | INFO     | cat /etc/os-release:
[2025-07-22 09:32:56] NAME="CentOS Linux"
[2025-07-22 09:32:56] VERSION="7 (Core)"
[2025-07-22 09:32:56] ID="centos"
[2025-07-22 09:32:56] ID_LIKE="rhel fedora"
[2025-07-22 09:32:56] VERSION_ID="7"
[2025-07-22 09:32:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 09:32:56] ANSI_COLOR="0;31"
[2025-07-22 09:32:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 09:32:56] HOME_URL="https://www.centos.org/"
[2025-07-22 09:32:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 09:32:56] 
[2025-07-22 09:32:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 09:32:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 09:32:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 09:32:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 09:32:56] 
[2025-07-22 09:32:56] 2025-07-22 13:32:25,334 | INFO     | ***************************************
[2025-07-22 09:32:56] 2025-07-22 13:32:25,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 09:32:56] 2025-07-22 13:32:25,853 | INFO     | sufficient remaining disk space (29124198400 B)
[2025-07-22 09:32:56] 2025-07-22 13:32:25,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 09:32:56] 2025-07-22 13:32:25,854 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 09:32:56] 2025-07-22 13:32:25,854 | INFO     | update_server=False
[2025-07-22 09:32:56] 2025-07-22 13:32:25,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 09:32:56] 2025-07-22 13:32:25,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 09:32:56] 2025-07-22 13:32:25,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 09:32:56] 2025-07-22 13:32:25,971 | INFO     | all data control threads have been joined
[2025-07-22 09:32:56] 2025-07-22 13:32:26,028 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 09:32:56] 2025-07-22 13:32:26,028 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 09:32:56] 2025-07-22 13:32:26,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 09:32:56] 2025-07-22 13:32:26,028 | INFO     | will abort loop
[2025-07-22 09:32:56] 2025-07-22 13:32:26,492 | INFO     | all payload control threads have been joined
[2025-07-22 09:32:56] 2025-07-22 13:32:26,860 | INFO     | [job] retrieve thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:26,860 | INFO     | [job] queue monitor thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:26,864 | INFO     | [job] validate thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:26,976 | INFO     | [data] control thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,034 | INFO     | [job] job monitor thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,205 | INFO     | all job control threads have been joined
[2025-07-22 09:32:56] 2025-07-22 13:32:27,263 | INFO     | [payload] validate_post thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,399 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,400 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,498 | INFO     | [payload] control thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 09:32:56] 2025-07-22 13:32:27,687 | INFO     | [payload] failed_post thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,829 | INFO     | [data] copytool_in thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:27,860 | INFO     | [data] copytool_out thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:28,027 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:28,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:28,211 | INFO     | [job] control thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:31,573 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 09:32:56] 2025-07-22 13:32:32,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441807071040)>', '<ExcThread(monitor, started 140441370474240)>']
[2025-07-22 09:32:56] 2025-07-22 13:32:37,093 | INFO     | all workflow threads have been joined
[2025-07-22 09:32:56] 2025-07-22 13:32:37,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 09:32:56] 2025-07-22 13:32:37,099 | INFO     | traces error code: 0
[2025-07-22 09:32:56] 2025-07-22 13:32:37,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 09:32:56] 2025-07-22 13:32:55,754 | INFO     | PID=15314 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-22 09:32:56] 2025-07-22 13:32:55,755 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 09:32:56] 2025-07-22 13:32:55,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 09:32:56] 2025-07-22 13:32:55,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 09:32:56] 2025-07-22 13:32:55,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 09:32:56] 2025-07-22 13:32:55,755 | INFO     | [monitor] control thread has ended
[2025-07-22 09:32:56] 2025-07-22 13:32:55,841 [wrapper] ==== pilot stdout END ====
[2025-07-22 09:32:56] 2025-07-22 13:32:55,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 09:32:56] 2025-07-22 13:32:55,849 [wrapper] pilotpid: 15314
[2025-07-22 09:32:56] 2025-07-22 13:32:55,853 [wrapper] Pilot exit status: 0
[2025-07-22 09:32:56] 2025-07-22 13:32:55,868 [wrapper] pandaids: 6741709509
[2025-07-22 09:32:56] 2025-07-22 13:32:55,908 [wrapper] cleanup supervisor_pilot 12294 15315
[2025-07-22 09:32:56] 2025-07-22 13:32:55,912 [wrapper] Test setup, not cleaning
[2025-07-22 09:32:56] 2025-07-22 13:32:55,916 [wrapper] apfmon messages muted
[2025-07-22 09:32:56] 2025-07-22 13:32:55,920 [wrapper] ==== wrapper stdout END ====
[2025-07-22 09:32:56] 2025-07-22 13:32:55,924 [wrapper] ==== wrapper stderr END ====
[2025-07-22 09:32:56]  *** Error codes and diagnostics ***
[2025-07-22 09:32:56]     "exeErrorCode": 0,
[2025-07-22 09:32:56]     "exeErrorDiag": "",
[2025-07-22 09:32:56]     "pilotErrorCode": 0,
[2025-07-22 09:32:56]     "pilotErrorDiag": "",
[2025-07-22 09:32:56]  *** Listing of results directory ***
[2025-07-22 09:32:56] total 570916
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas    530466 Jul 21 20:28 pilot3.tar.gz
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas      5112 Jul 21 20:32 queuedata.json
[2025-07-22 09:32:56] -rwx------ 1 boincer umatlas     36292 Jul 21 20:33 runpilot2-wrapper.sh
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas       100 Jul 22 07:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 09:32:56] -rwxr-xr-x 1 boincer umatlas      7986 Jul 22 07:51 run_atlas
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas       105 Jul 22 07:51 job.xml
[2025-07-22 09:32:56] -rw-r--r-- 2 boincer umatlas 314641499 Jul 22 07:51 EVNT.45697451._000052.pool.root.1
[2025-07-22 09:32:56] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 07:51 start_atlas.sh
[2025-07-22 09:32:56] drwxrwx--x 2 boincer umatlas      4096 Jul 22 07:51 shared
[2025-07-22 09:32:56] -rw-r--r-- 2 boincer umatlas    542907 Jul 22 07:51 input.tar.gz
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas         0 Jul 22 07:51 boinc_lockfile
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas      2633 Jul 22 07:51 pandaJob.out
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas    976662 Jul 22 07:52 agis_schedconf.cvmfs.json
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas   1593031 Jul 22 07:52 agis_ddmendpoints.agis.ALL.json
[2025-07-22 09:32:56] drwx------ 4 boincer umatlas      4096 Jul 22 07:52 pilot3
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas      5866 Jul 22 09:28 init_data.xml
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas 264260256 Jul 22 09:31 HITS.45697453._001279.pool.root.1
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas       529 Jul 22 09:32 boinc_task_state.xml
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas      1050 Jul 22 09:32 memory_monitor_summary.json
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas    364910 Jul 22 09:32 log.45697453._001279.job.log.tgz.1
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas      7851 Jul 22 09:32 heartbeat.json
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas      8192 Jul 22 09:32 boinc_mmap_file
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas        27 Jul 22 09:32 wrapper_checkpoint.txt
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas       745 Jul 22 09:32 pilotlog.txt
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas        95 Jul 22 09:32 pilot_heartbeat.json
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas    560625 Jul 22 09:32 log.45697453._001279.job.log.1
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas       357 Jul 22 09:32 output.list
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas       620 Jul 22 09:32 runtime_log
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas    942080 Jul 22 09:32 result.tar.gz
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas      8662 Jul 22 09:32 runtime_log.err
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas       659 Jul 22 09:32 Ru8LDmU7Fy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxaHLDmMGXRKm.diag
[2025-07-22 09:32:56] -rw-r--r-- 1 boincer umatlas     21664 Jul 22 09:32 stderr.txt
[2025-07-22 09:32:56] HITS file was successfully produced:
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas 264260256 Jul 22 09:31 shared/HITS.pool.root.1
[2025-07-22 09:32:56]  *** Contents of shared directory: ***
[2025-07-22 09:32:56] total 566808
[2025-07-22 09:32:56] -rw-r--r-- 2 boincer umatlas 314641499 Jul 22 07:51 ATLAS.root_0
[2025-07-22 09:32:56] -rw-r--r-- 2 boincer umatlas     15095 Jul 22 07:51 start_atlas.sh
[2025-07-22 09:32:56] -rw-r--r-- 2 boincer umatlas    542907 Jul 22 07:51 input.tar.gz
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas 264260256 Jul 22 09:31 HITS.pool.root.1
[2025-07-22 09:32:56] -rw------- 1 boincer umatlas    942080 Jul 22 09:32 result.tar.gz
09:32:57 (11676): run_atlas exited; CPU time 65150.862436
09:32:57 (11676): called boinc_finish(0)

</stderr_txt>
]]>

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